| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 846,307 | G→C | 3.7% | T193T (ACC→ACG) | glnQ ← | glutamine transporter subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 846,307 | 0 | G→C | 3.7% | 18.1 ‑1.1 ‑0.0 | 271 | T193T (ACC→ACG) | glnQ | glutamine transporter subunit |
| Reads supporting (aligned to +/- strand): new base (3/7): ref base (125/136): total (128/143) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.42e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 277 total aligned reads displayed.
GGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAA > NC_007779/846207‑846407 | ggTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTgg > 1:5370583/1‑101 (MQ=255) tCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTc < 1:7879496/101‑1 (MQ=255) cTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCa < 1:4744794/101‑1 (MQ=255) cTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCa > 1:2464867/1‑101 (MQ=255) ttGATCAACTCCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCAc < 1:13505916/101‑1 (MQ=255) ttGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCAc < 1:8270095/101‑1 (MQ=255) ttGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCAc > 1:11870721/1‑101 (MQ=255) tGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACg > 1:8342392/1‑101 (MQ=255) tGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACg > 1:11525989/1‑101 (MQ=255) gATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGa < 1:1387232/101‑1 (MQ=255) gATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGa < 1:10702434/101‑1 (MQ=255) cAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCAGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCa > 1:6225353/1‑101 (MQ=255) aaCACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCAc > 1:7596617/1‑101 (MQ=255) cacCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCa < 1:3084735/101‑1 (MQ=255) cacCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCa > 1:1204686/1‑101 (MQ=255) acCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCAt > 1:11900311/1‑101 (MQ=255) cTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCg < 1:4629240/101‑1 (MQ=255) cTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCg < 1:1238816/101‑1 (MQ=255) tGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGt > 1:12232146/1‑101 (MQ=255) cGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGTAAAACCGATTTCGTGGGTCACGATCACCATCGTCa < 1:9338614/101‑1 (MQ=255) cGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCa < 1:1816217/101‑1 (MQ=255) cGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCa > 1:2127966/1‑101 (MQ=255) ggATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAt > 1:4525375/1‑101 (MQ=255) aTTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑cc > 1:5854068/1‑101 (MQ=255) ttGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑ccc < 1:10390420/101‑1 (MQ=255) tGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCct < 1:6770163/101‑1 (MQ=255) gCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCATGATCACCATCGTCAT‑CCctt > 1:7390967/1‑101 (MQ=255) ccATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCcttc > 1:13737062/1‑101 (MQ=255) cTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCa > 1:3900369/1‑101 (MQ=255) tCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGc > 1:11091582/1‑101 (MQ=255) ccGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGcc > 1:6617377/1‑101 (MQ=255) cGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCa < 1:3565376/101‑1 (MQ=255) gCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAg < 1:10643893/101‑1 (MQ=255) cAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGa < 1:6695868/101‑1 (MQ=255) aaTCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAGCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGAt < 1:4722305/101‑1 (MQ=255) aaTCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGAt > 1:13562492/1‑101 (MQ=255) aaTCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGAt > 1:6475479/1‑101 (MQ=255) aTCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGTCAGATc > 1:5061206/1‑101 (MQ=255) aTCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATc < 1:11151476/101‑1 (MQ=255) aTCCGGCCTGTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATc < 1:14176628/101‑1 (MQ=255) tCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATcc < 1:2719228/101‑1 (MQ=255) ggCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGc > 1:5961090/1‑101 (MQ=255) ccTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCAt < 1:657236/101‑1 (MQ=255) ccTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCAt < 1:9024862/101‑1 (MQ=255) ccTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCAt < 1:6138146/101‑1 (MQ=255) cTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATa > 1:11388801/1‑101 (MQ=255) cTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATa > 1:4080184/1‑101 (MQ=255) cTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATa < 1:7788329/101‑1 (MQ=255) ttGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAAc > 1:8133495/1‑101 (MQ=255) gTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCt > 1:3476779/1‑101 (MQ=255) gATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCa < 1:12004716/101‑1 (MQ=255) gATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCa < 1:3343500/101‑1 (MQ=255) aTAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAg > 1:5699625/1‑101 (MQ=255) aaaGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCa > 1:2281050/1‑101 (MQ=255) aaaGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCa > 1:1632635/1‑101 (MQ=255) aaGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCAc > 1:1098482/1‑101 (MQ=255) aaGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTACATAACCTTCAGCAc > 1:12173741/1‑101 (MQ=255) tCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCa < 1:749438/101‑1 (MQ=255) cAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCAt < 1:8399165/101‑1 (MQ=255) cAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCAt < 1:11724351/101‑1 (MQ=255) aGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCTTg < 1:11652763/101‑1 (MQ=255) ccGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGgc > 1:11025510/1‑101 (MQ=255) cgcgAATCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGgcg < 1:9619151/101‑1 (MQ=255) cgcgAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGgcg < 1:12620098/101‑1 (MQ=255) cgAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACTATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCa < 1:7226617/101‑1 (MQ=255) cgAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCa < 1:1433569/101‑1 (MQ=255) gAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAg > 1:4357324/1‑101 (MQ=255) aaGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGt > 1:9412004/1‑101 (MQ=255) cTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTcc > 1:955874/1‑101 (MQ=255) cTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTcc < 1:14002565/101‑1 (MQ=255) cTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTGCATGGCGCAGTTcc > 1:12484651/1‑101 (MQ=255) cTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCggg < 1:12809452/101‑1 (MQ=255) tttCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGt > 1:12910400/1‑101 (MQ=255) tttCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGt > 1:14196264/1‑101 (MQ=255) tttCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGt < 1:7039282/101‑1 (MQ=255) tctcGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGTCa < 1:13200567/101‑1 (MQ=255) cAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGTCAAGAGCg > 1:2998015/1‑101 (MQ=255) cAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGTCAAGAGCg < 1:1395608/101‑1 (MQ=255) aaaCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGTCAAGAGCGGa > 1:9538541/1‑101 (MQ=255) aaCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGTCAAGAGCGGaa > 1:2070743/1‑101 (MQ=255) aCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGTCAAGAGCGGAAg > 1:10016254/1‑101 (MQ=255) aCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGTCAAGAGCGGAAg < 1:8464126/101‑1 (MQ=255) ccGATTTCGTGGGTCCCGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGTCAAGAGCGGAAGt < 1:9783835/101‑1 (MQ=255) ccatctCGTGCGTCACGACGACCATGGTCATACCCTT‑ATCGGCCAGACCATGCATGACGTTGAGAACCTCACCGACGAGCTCCGGGTCAAGAGCGGAAGTc > 1:5573001/6‑101 (MQ=255) cGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGTCAAGAGCGGAAGTc < 1:13922925/101‑1 (MQ=255) gATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGTCAAGAGCGGAAGTCg < 1:2825502/101‑1 (MQ=255) catctCGTGCGTCACGACGACCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCACCGACGAGCTCCGGGTCAAGAGCGGAAGTCg < 1:2374423/97‑1 (MQ=255) catctCGTGCGTCACGACGACCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCACCGACGAGCTCCGGGTCAAGAGCGGAAGTCg < 1:5520013/97‑1 (MQ=255) aTTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGTCAAGAGCGGAAGTCgg > 1:3230339/1‑101 (MQ=255) aTTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGTCAAGAGCGGAAGTCgg < 1:3016613/101‑1 (MQ=255) tttCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGt > 1:7289820/1‑101 (MQ=255) tctCGTGCGTCACGACGACCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCACCGACGAGCTCCGGGTCAAGAGCGGAAGTCggc < 1:863489/99‑2 (MQ=255) ttCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGtt < 1:8848236/101‑1 (MQ=255) ttCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGtt > 1:2200574/1‑101 (MQ=255) ttCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGtt > 1:14085285/1‑101 (MQ=255) tCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtc < 1:1087725/101‑1 (MQ=255) cGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtca > 1:9888582/1‑101 (MQ=255) gTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtcat < 1:6919099/101‑1 (MQ=255) gTGCGTCACGACGACCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCACCGACGAGCTCCGGGTCAAGAGCGGAAGTCGGCtcat > 1:10233696/1‑101 (MQ=255) tGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtcatc < 1:4276058/101‑1 (MQ=255) | GGTTCTTGATCAACACCTGCGGATTGCCATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCATGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAA > NC_007779/846207‑846407 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |