| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 846,364 | T→C | 6.0% | E174E (GAA→GAG) | glnQ ← | glutamine transporter subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 846,364 | 0 | T→C | 6.0% | 36.1 ‑2.6 ‑0.1 | 284 | E174E (GAA→GAG) | glnQ | glutamine transporter subunit |
| Reads supporting (aligned to +/- strand): new base (3/14): ref base (110/157): total (113/171) | ||||||||||
| Fisher's exact test strand distribution p-value = 7.26e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.50e-01 | ||||||||||
Only 100 of 294 total aligned reads displayed.
GATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGTT > NC_007779/846265‑846464 | aTCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTc < 1:3425952/101‑1 (MQ=255) cAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑t < 1:11745470/101‑1 (MQ=255) aGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCT‑Tg < 1:11652763/101‑1 (MQ=255) gCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑Tgg < 1:7834792/101‑1 (MQ=255) ccGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGgc > 1:11025510/1‑101 (MQ=255) cgcgAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGgcg < 1:12620098/101‑1 (MQ=255) cgcgAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGgcg > 1:3083285/1‑101 (MQ=255) cgcgAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGgcg < 1:473871/101‑1 (MQ=255) gcgAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGgcgc > 1:10661447/1‑101 (MQ=255) aaGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGt > 1:13882572/1‑101 (MQ=255) aaGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGt > 1:14145856/1‑101 (MQ=255) cTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTcc < 1:2399587/101‑1 (MQ=255) cTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTcc > 1:955874/1‑101 (MQ=255) cTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTGCA‑TGGCGCAGTTcc > 1:12484651/1‑101 (MQ=255) tttCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGt < 1:7039282/101‑1 (MQ=255) ttCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTc < 1:2300407/101‑1 (MQ=255) tcGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAag < 1:7175237/101‑1 (MQ=255) tcGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAag < 1:9430125/101‑1 (MQ=255) cGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAaga > 1:5472211/1‑101 (MQ=255) cGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAaga < 1:13351139/101‑1 (MQ=255) cAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCg < 1:11408671/101‑1 (MQ=255) cAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCg > 1:11223124/1‑101 (MQ=255) cAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCg > 1:2998015/1‑101 (MQ=255) cAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCg < 1:1395608/101‑1 (MQ=255) cAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCg < 1:13728468/101‑1 (MQ=255) aaaaCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCgg > 1:5522121/1‑101 (MQ=255) aaaaCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCgg < 1:6271080/101‑1 (MQ=255) aaaaCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCgg > 1:10376835/1‑101 (MQ=255) aCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAg > 1:10016254/1‑101 (MQ=255) ccatctCGTGCGTCACGACGACCATGGTCATACCCTT‑ATCGGCCAGACCATGCATGACGTTGAGAACCTCA‑CCGACGAGCTCCGGGTCAAGAGCGGAAGTc > 1:5573001/6‑101 (MQ=255) cGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTc < 1:4200555/101‑1 (MQ=255) cGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTc < 1:4319400/101‑1 (MQ=255) gATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCg < 1:2825502/101‑1 (MQ=255) gATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCg > 1:5072622/1‑101 (MQ=255) gATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCg > 1:6861643/1‑101 (MQ=255) aTTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCgg < 1:2132451/101‑1 (MQ=255) aTTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCgg > 1:3230339/1‑101 (MQ=255) aTTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCgg < 1:3016613/101‑1 (MQ=255) tttCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGt < 1:12211153/101‑1 (MQ=255) tttCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGt > 1:7289820/1‑101 (MQ=255) tctCGTGCGTCACGACGACCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCA‑CCGACGAGCTCCGGGTCAAGAGCGGAAGTCggc < 1:8483196/99‑2 (MQ=255) tctCGTGCGTCACGACGACCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCA‑CCGACGAGCTCCGGGTCAAGAGCGGAAGTCggc < 1:863489/99‑2 (MQ=255) tCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtc < 1:1087725/101‑1 (MQ=255) cGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtca < 1:4671862/101‑1 (MQ=255) cGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtca > 1:348172/1‑101 (MQ=255) gTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtcat < 1:8044385/101‑1 (MQ=255) cgTCACGACGACCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCACCGACG‑AGCTCCGGGTCAAGAGCGGAAGTCGGCtcatcga < 1:9923178/100‑3 (MQ=255) gTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCaaa > 1:13993600/1‑101 (MQ=255) tCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAAc < 1:517316/101‑1 (MQ=255) tCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAAc > 1:5803826/1‑101 (MQ=255) cACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACa < 1:9673052/101‑1 (MQ=255) aCGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAg > 1:8370686/1‑101 (MQ=255) gATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGca > 1:10195275/1‑101 (MQ=255) aTCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGcat > 1:10959678/1‑101 (MQ=255) cACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGcatca > 1:11701623/1‑101 (MQ=255) cACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGcatca < 1:11591663/101‑1 (MQ=255) cACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑AGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGcatca > 1:14333537/1‑101 (MQ=255) ccATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCAtt > 1:14008987/1‑101 (MQ=255) gTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCgg < 1:13007641/101‑1 (MQ=255) gTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCgg < 1:6550929/101‑1 (MQ=255) gTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCgg < 1:9615185/101‑1 (MQ=255) cAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCt > 1:11828605/1‑101 (MQ=255) cccTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCa < 1:8285518/101‑1 (MQ=255) ccTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCAc > 1:11492928/1‑101 (MQ=255) cttcttCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCAcc < 1:12033668/101‑1 (MQ=255) ttcttcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCg < 1:1932984/101‑1 (MQ=255) ttcttcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCg < 1:14080244/101‑1 (MQ=255) ttcttcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCg > 1:665191/1‑101 (MQ=255) tcttcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGc < 1:12836690/101‑1 (MQ=255) tcttcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGc < 1:13913689/101‑1 (MQ=255) cttcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGcc < 1:11938605/101‑1 (MQ=255) cttcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGcc < 1:1664984/101‑1 (MQ=255) ttcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCa < 1:8444151/101‑1 (MQ=255) tcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAg > 1:4387750/1‑101 (MQ=255) tcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAg < 1:7459431/101‑1 (MQ=255) aGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAgcg < 1:12726436/101‑1 (MQ=255) ccAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAgcgcg > 1:3784818/1‑101 (MQ=255) ccAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGCTCATCAAACAGCATCATTTTCGGCTTCACCGCCAgcgcg < 1:1861704/101‑1 (MQ=255) aGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGcgcgcg < 1:8850186/101‑1 (MQ=255) gATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCgg < 1:13477689/101‑1 (MQ=255) aTCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCggg < 1:6167886/101‑1 (MQ=255) tCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGc > 1:6407823/1‑101 (MQ=255) ccTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCa < 1:4566288/101‑1 (MQ=255) tGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAAt < 1:12322477/101‑1 (MQ=255) cATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCg > 1:6936095/1‑101 (MQ=255) aaCCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCca > 1:13190400/1‑101 (MQ=255) cTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCacac < 1:228473/101‑1 (MQ=255) cTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCacac < 1:7983690/101‑1 (MQ=255) ttCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACg > 1:9811458/1‑101 (MQ=255) ttCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACg > 1:5907017/1‑101 (MQ=255) aGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACgctg < 1:2229565/101‑1 (MQ=255) gCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACgctgc > 1:1530711/1‑101 (MQ=255) cACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACgctgct < 1:9369245/101‑1 (MQ=255) cACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACgctgct > 1:2736879/1‑101 (MQ=255) cTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGt > 1:5297265/1‑101 (MQ=255) ttCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGtt < 1:7595316/101‑1 (MQ=255) ttCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGtt > 1:11625118/1‑101 (MQ=255) ttCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGtt > 1:7027773/1‑101 (MQ=255) ttCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGtt > 1:1008739/1‑101 (MQ=255) ttCA‑TGGCGCAGTTCAGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGtt < 1:10493386/101‑1 (MQ=255) | GATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGTT > NC_007779/846265‑846464 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |