| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 846,369 | G→C | 3.9% | H173D (CAT→GAT) | glnQ ← | glutamine transporter subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 846,369 | 0 | G→C | 3.9% | 22.5 ‑0.6 ‑0.0 | 284 | H173D (CAT→GAT) | glnQ | glutamine transporter subunit |
| Reads supporting (aligned to +/- strand): new base (3/8): ref base (110/163): total (113/171) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.35e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.46e-01 | ||||||||||
Only 100 of 290 total aligned reads displayed.
AGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGTTGACC > NC_007779/846269‑846468 | aGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑Tg > 1:12799738/1‑101 (MQ=255)aGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑Tg < 1:2751504/101‑1 (MQ=255) gCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑Tgg < 1:7834792/101‑1 (MQ=255) gcgAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGgcgc > 1:10661447/1‑101 (MQ=255) cgAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACTATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCa < 1:7226617/101‑1 (MQ=255) aaGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGt > 1:13882572/1‑101 (MQ=255) gCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTc > 1:10766692/1‑101 (MQ=255) cTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTcc > 1:955874/1‑101 (MQ=255) cTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTcc < 1:14002565/101‑1 (MQ=255) tACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCg < 1:2253214/101‑1 (MQ=255) aCTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCgg < 1:3013988/101‑1 (MQ=255) tttCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGt > 1:14196264/1‑101 (MQ=255) ttCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTc > 1:5086983/1‑101 (MQ=255) tctcGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCa < 1:13200567/101‑1 (MQ=255) ctcGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCaa < 1:12314703/101‑1 (MQ=255) tcGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAag < 1:7175237/101‑1 (MQ=255) tcGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAag < 1:9430125/101‑1 (MQ=255) cGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAaga > 1:5556851/1‑101 (MQ=255) cGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAaga > 1:6981208/1‑101 (MQ=255) ggCAAAACCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAagag > 1:2134705/1‑101 (MQ=255) ggCAAAACCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAagag < 1:10929234/101‑1 (MQ=255) cAAAACCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCg < 1:5385546/101‑1 (MQ=255) cAAAACCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCg < 1:1395608/101‑1 (MQ=255) aaaaCCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCgg > 1:3242695/1‑101 (MQ=255) aaaaCCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCgg > 1:10376835/1‑101 (MQ=255) aaaCCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGa > 1:6724268/1‑101 (MQ=255) aaCCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGaa > 1:2070743/1‑101 (MQ=255) aCCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAg > 1:10016254/1‑101 (MQ=255) ccGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCTGAAGt > 1:6144896/1‑101 (MQ=255) cGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTc < 1:12668544/101‑1 (MQ=255) gATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCg > 1:11697641/1‑101 (MQ=255) catctCGTGCGTCACGACGACCATGGTCATACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCA‑CCGACGAGCTCCGGGTCAAGAGCGGAAGTCg < 1:5520013/97‑1 (MQ=255) aTTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCgg > 1:13488725/1‑101 (MQ=255) tctCGTGCGTCACGACGACCATGGTCATACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCA‑CCGACGAGCTCCGGGTCAAGAGCGGAAGTCggc < 1:863489/99‑2 (MQ=255) ttCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGtt > 1:14085285/1‑101 (MQ=255) tCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtc < 1:11012194/101‑1 (MQ=255) tCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtc > 1:1828426/1‑101 (MQ=255) cGTGCGTCACGACGACCATGGTCATACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCA‑CCGACGAGCTCCGGGTCAAGAGCGGAAGTCGGCtca < 1:5821629/101‑1 (MQ=255) gTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtcat < 1:6919099/101‑1 (MQ=255) gTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtcat < 1:8044385/101‑1 (MQ=255) tGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtcatc > 1:11883786/1‑101 (MQ=255) tGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtcatc < 1:4276058/101‑1 (MQ=255) tGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtcatc < 1:4793856/101‑1 (MQ=255) gcgTCACGACGACCATGGTCATACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCACCGACG‑AGCTCCGGGTCAAGAGCGGAAGTCGGCtcatcg < 1:308401/99‑2 (MQ=255) gcgTCACGACGACCATGGTCATACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCACCGACG‑AGCTCCGGGTCAAGAGCGGAAGTCGGCtcatcg < 1:5183471/99‑2 (MQ=255) cgTCACGACGACCATGGTCATACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCACCGACG‑AGCTCCGGGTCAAGAGCGGAAGTCGGCtcatcga < 1:9923178/100‑3 (MQ=255) gTCACGACGACCATGGTCATACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCACCGACG‑AGCTCCGGGTCAAGAGCGGAAGTCGGCTCATCgaa < 1:288006/101‑1 (MQ=255) cACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACa < 1:9673052/101‑1 (MQ=255) aCGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAg > 1:1619365/1‑101 (MQ=255) aCGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAg > 1:8370686/1‑101 (MQ=255) cGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGc > 1:6257202/1‑101 (MQ=255) gacgaCCATGGTCATACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCA‑CCGACGAGCTCCGGGTCAAGAGCGGAAGTCGGCTCATCGAAGAGca < 1:12869135/97‑1 (MQ=255) gATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGca > 1:7416033/1‑101 (MQ=255) gATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGca > 1:6365877/1‑101 (MQ=255) gATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGca > 1:10195275/1‑101 (MQ=255) gATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGca > 1:4698401/1‑101 (MQ=255) tCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGcatc < 1:11398723/101‑1 (MQ=255) aCCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGcatcat < 1:2286583/101‑1 (MQ=255) cATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCAttt < 1:3479658/101‑1 (MQ=255) aTCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCAtttt < 1:4377332/101‑1 (MQ=255) gTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCgg < 1:9615185/101‑1 (MQ=255) cccTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCa < 1:11611720/101‑1 (MQ=255) cccTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCa < 1:8285518/101‑1 (MQ=255) ccTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCAc > 1:12152802/1‑101 (MQ=255) cttcttCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCAcc < 1:2638556/101‑1 (MQ=255) cttcttCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCAcc < 1:11799716/101‑1 (MQ=255) ttcttcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCg > 1:13396437/1‑101 (MQ=255) ttcttcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCg > 1:11426653/1‑101 (MQ=255) tcttcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGc < 1:13913689/101‑1 (MQ=255) tcttcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGc < 1:11634822/101‑1 (MQ=255) ttcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCa < 1:13140079/101‑1 (MQ=255) tcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAg < 1:3672288/101‑1 (MQ=255) tcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAg < 1:654034/101‑1 (MQ=255) cAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAgc < 1:11514300/101‑1 (MQ=255) gCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAgcgc < 1:1890899/101‑1 (MQ=255) gCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAgcgc < 1:4655669/101‑1 (MQ=255) ccAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAgcgcg < 1:303183/101‑1 (MQ=255) aGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGcgcgcg < 1:8850186/101‑1 (MQ=255) aGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGcgcgcg < 1:12021342/101‑1 (MQ=255) gATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCgg < 1:13742221/101‑1 (MQ=255) tGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAAt > 1:12575770/1‑101 (MQ=255) cATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCg < 1:568603/101‑1 (MQ=255) tAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGcc > 1:4478429/1‑101 (MQ=255) aCCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCcac > 1:12399871/1‑101 (MQ=255) cTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCacac < 1:7983690/101‑1 (MQ=255) cTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCacac < 1:2362539/101‑1 (MQ=255) ttCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACg > 1:9811458/1‑101 (MQ=255) ttCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCACGGGCAATCGCCACACg < 1:8481695/101‑1 (MQ=255) cAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACgct > 1:7034688/1‑101 (MQ=255) aGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACgctg < 1:3941952/101‑1 (MQ=255) gCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACgctgc > 1:1483846/1‑101 (MQ=255) cACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACgctgct < 1:8607041/101‑1 (MQ=255) cACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACgctgct < 1:9369245/101‑1 (MQ=255) cACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACgctgct < 1:6612297/101‑1 (MQ=255) ttCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGtt < 1:7595316/101‑1 (MQ=255) ttCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGtt < 1:14044276/101‑1 (MQ=255) ttCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGtt > 1:1008739/1‑101 (MQ=255) ttCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGtt < 1:11212387/101‑1 (MQ=255) ttCA‑TGGCGCAGTTCAGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGtt < 1:10493386/101‑1 (MQ=255) cA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGTTGa < 1:6043309/101‑1 (MQ=255) | AGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCATCCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCAGCGCGCGGGCAATCGCCACACGCTGCTGTTGACC > NC_007779/846269‑846468 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |