| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,485,323 | G→C | 15.3% | Q164H (CAG→CAC) | hrpA → | ATP‑dependent helicase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 1,485,323 | 0 | G→C | 15.3% | 120.1 ‑3.0 ‑0.0 | 248 | Q164H (CAG→CAC) | hrpA | ATP‑dependent helicase |
| Reads supporting (aligned to +/- strand): new base (13/25): ref base (111/99): total (124/124) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.14e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.49e-01 | ||||||||||
Only 100 of 250 total aligned reads displayed.
GGGCGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTG > NC_007779/1485224‑1485422 | gggCGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGc > 1:3890214/1‑101 (MQ=255)gggCGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGc > 1:8146656/1‑101 (MQ=255)gggCGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGc > 1:2011955/1‑101 (MQ=255) cGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAg > 1:9399921/1‑101 (MQ=255) ggTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGa > 1:13391463/1‑101 (MQ=255) ggTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGa > 1:5541495/1‑101 (MQ=255) gTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGAc < 1:11224726/101‑1 (MQ=255) ttGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGAcc < 1:7993831/101‑1 (MQ=255) ttGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGAcc > 1:8860901/1‑101 (MQ=255) aTCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCct > 1:1689559/1‑101 (MQ=255) aTCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGAATCCTGCTGGCGGAGATCCAGCAAGACCGCct > 1:13021008/1‑101 (MQ=255) tCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCctg > 1:9301524/1‑101 (MQ=255) ggTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCctgct < 1:9090210/101‑1 (MQ=255) ggTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCctgct > 1:3243785/1‑101 (MQ=255) gTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCctgctg > 1:4897936/1‑101 (MQ=255) gTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCctgctg > 1:2204757/1‑101 (MQ=255) ttACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑a < 1:12365058/101‑1 (MQ=255) aCAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑Tg < 1:7421544/101‑1 (MQ=255) cAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGc > 1:5309/1‑101 (MQ=255) aaaGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCa > 1:10236725/1‑101 (MQ=255) aaGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAg < 1:1522024/101‑1 (MQ=255) aGTGCGTTTCAGCGATCCCGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGt < 1:357722/101‑1 (MQ=255) gTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTa < 1:8222548/101‑1 (MQ=255) tGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTAc < 1:5216310/101‑1 (MQ=255) tGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTAc > 1:8791045/1‑101 (MQ=255) cGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGa > 1:100778/1‑101 (MQ=255) gTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGac > 1:661919/1‑101 (MQ=255) tttCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGaca > 1:1401726/1‑101 (MQ=255) ttCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGacac > 1:3183072/1‑101 (MQ=255) tCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACt > 1:9846945/1‑101 (MQ=255) cGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCa > 1:4447729/1‑101 (MQ=255) gATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCat > 1:4884349/1‑101 (MQ=255) gATCACGTAAGTGATAACACGATGGTCAAGCTGACGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCat > 1:395564/1‑101 (MQ=255) tCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCatta > 1:2575538/1‑101 (MQ=255) cACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCattat > 1:11886769/1‑101 (MQ=255) aCGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCattatt > 1:14056225/1‑101 (MQ=255) aCGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCattatt < 1:13276779/101‑1 (MQ=255) cGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTg < 1:4122125/101‑1 (MQ=255) gTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGa < 1:10816801/101‑1 (MQ=255) tAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGAc > 1:425465/1‑101 (MQ=255) aaGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACg > 1:5136344/1‑101 (MQ=255) aaGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACg < 1:11798361/101‑1 (MQ=255) aGTGATAACACGATGGTCAAGCAGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGa > 1:12329696/1‑101 (MQ=255) tGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAg < 1:13562920/101‑1 (MQ=255) gATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGTAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAgc > 1:11746237/1‑101 (MQ=255) aTAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAgcg > 1:2966711/1‑101 (MQ=255) aTAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAgcg < 1:4046499/101‑1 (MQ=255) aTAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAgcg < 1:6094406/101‑1 (MQ=255) aaCACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCa > 1:1193898/1‑101 (MQ=255) acacGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCAc < 1:762810/101‑1 (MQ=255) acacGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCAc < 1:1719701/101‑1 (MQ=255) cacGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACg < 1:10026515/101‑1 (MQ=255) acGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGa > 1:5889756/1‑101 (MQ=255) cGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGaa > 1:9949630/1‑101 (MQ=255) cGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGaa < 1:7741977/101‑1 (MQ=255) cGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGaa > 1:6307052/1‑101 (MQ=255) gATGGTCAAGCTGGTGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAAc > 1:3386493/1‑101 (MQ=255) tGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGc > 1:1099335/1‑101 (MQ=255) tGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGc > 1:9718466/1‑101 (MQ=255) cattaaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑C‑GTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCa < 1:1408366/94‑1 (MQ=255) ttaaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑C‑GTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGc > 1:13895876/6‑101 (MQ=255) tCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGc > 1:7476425/1‑101 (MQ=255) aaGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCt < 1:10479829/101‑1 (MQ=255) acTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑C‑GTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCtca < 1:12991051/100‑3 (MQ=255) cTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGaa < 1:7060855/101‑1 (MQ=255) cTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑C‑GTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCaa > 1:9741732/1‑101 (MQ=255) tgatgaCCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAat < 1:6131085/101‑1 (MQ=255) gatgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑C‑GTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCaaca < 1:6467691/101‑3 (MQ=255) atgaCCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAatat < 1:78715/101‑1 (MQ=255) atgaCCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAatat > 1:6838311/1‑101 (MQ=255) atgaCCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAatat < 1:5841324/101‑1 (MQ=255) atgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCG‑TG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAacat < 1:5504919/101‑1 (MQ=255) tgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCG‑TG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATc < 1:6391924/101‑1 (MQ=255) tgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCG‑TG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATc < 1:6332820/101‑1 (MQ=255) tgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCG‑TG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATc < 1:8633877/101‑1 (MQ=255) gaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCG‑TG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCg < 1:6760842/101‑1 (MQ=255) gaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCG‑TG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCg < 1:2079879/101‑1 (MQ=255) ccGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑CGTG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGac < 1:9217276/101‑2 (MQ=255) cGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAtt < 1:2291697/101‑1 (MQ=255) cGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAtt > 1:8556761/1‑101 (MQ=255) cGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAttttt < 1:10695431/101‑1 (MQ=255) ggTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAtttttt > 1:6367562/1‑101 (MQ=255) ggTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAtttttt > 1:1589900/1‑101 (MQ=255) ggTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑C‑GTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGActtcct < 1:13785570/101‑4 (MQ=255) aTCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCt < 1:2870609/101‑1 (MQ=255) ccTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCg > 1:3006430/1‑101 (MQ=255) ctgctgGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCgg < 1:11440066/101‑1 (MQ=255) tgGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTAt < 1:8197228/101‑1 (MQ=255) gCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTAttt < 1:13182672/101‑1 (MQ=255) cGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTg > 1:8044942/1‑101 (MQ=255) cGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTg > 1:7439870/1‑101 (MQ=255) cGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTg < 1:3088886/101‑1 (MQ=255) cGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTg < 1:3840893/101‑1 (MQ=255) agaTCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGaaa < 1:9632573/101‑1 (MQ=255) gaTCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAag < 1:5659244/101‑1 (MQ=255) tCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAagag < 1:10941179/101‑1 (MQ=255) tCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAagag > 1:7685877/1‑101 (MQ=255) tCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAagag < 1:6236081/101‑1 (MQ=255) ccAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGt > 1:13676248/1‑101 (MQ=255) aGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtg > 1:9539460/1‑101 (MQ=255) | GGGCGGTTGCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTG > NC_007779/1485224‑1485422 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |