| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,485,365 | C→T | 18.7% | D178D (GAC→GAT) | hrpA → | ATP‑dependent helicase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 1,485,365 | 0 | C→T | 18.7% | 141.6 ‑0.4 ‑2.6 | 267 | D178D (GAC→GAT) | hrpA | ATP‑dependent helicase |
| Reads supporting (aligned to +/- strand): new base (25/25): ref base (117/100): total (142/125) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.40e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.52e-03 | ||||||||||
Only 100 of 276 total aligned reads displayed.
TAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCG > NC_007779/1485265‑1485464 | tAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGAc < 1:10382392/101‑1 (MQ=255) aaGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACg > 1:7726089/1‑101 (MQ=255) aGTGATAACACGATGGTCAAGCAGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGa > 1:12329696/1‑101 (MQ=255) gTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGaa > 1:9223554/1‑101 (MQ=255) gATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAgc < 1:14026046/101‑1 (MQ=255) aTAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAgcg < 1:4046499/101‑1 (MQ=255) aaCACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCa > 1:1193898/1‑101 (MQ=255) acacGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCAc < 1:762810/101‑1 (MQ=255) acacGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCAc > 1:8129983/1‑101 (MQ=255) acacGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCAc < 1:1017367/101‑1 (MQ=255) cacGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACg < 1:10026515/101‑1 (MQ=255) acGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGa > 1:1092001/1‑101 (MQ=255) cGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGaa > 1:6307052/1‑101 (MQ=255) gATGGTCAAGCTGGTGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAAc > 1:3386493/1‑101 (MQ=255) gATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAAc < 1:9423439/101‑1 (MQ=255) gATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAAc < 1:3957414/101‑1 (MQ=255) gATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAAc < 1:1670083/101‑1 (MQ=255) tGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGc > 1:9718466/1‑101 (MQ=255) tCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGCCGAAGCGCACGAACGCAGc > 1:4398591/1‑101 (MQ=255) tCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGc > 1:7476425/1‑101 (MQ=255) aaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑C‑GTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCt > 1:13636630/4‑101 (MQ=255) aaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑C‑GTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCt > 1:308764/4‑101 (MQ=255) aaGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCt > 1:8023807/1‑101 (MQ=255) aaGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCt < 1:172197/101‑1 (MQ=255) aacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCG‑TG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCtc < 1:7807041/99‑2 (MQ=255) gCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGa < 1:13869394/101‑1 (MQ=255) gCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGa > 1:11789124/1‑101 (MQ=255) gCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGa > 1:2914896/1‑101 (MQ=255) cTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGaa < 1:7060855/101‑1 (MQ=255) cTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGaa > 1:6234903/1‑101 (MQ=255) cTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGaa > 1:2243244/1‑101 (MQ=255) cTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑C‑GTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCaa > 1:13123256/1‑101 (MQ=255) tgatgaCCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAat > 1:4788245/1‑101 (MQ=255) tgatgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑CGTG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCaac < 1:5787573/101‑2 (MQ=255) gatgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑C‑GTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCaaca < 1:6467691/101‑3 (MQ=255) atgaCCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAatat > 1:6838311/1‑101 (MQ=255) atgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCG‑TG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAacat < 1:1531038/101‑1 (MQ=255) tgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCG‑TG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATc < 1:6332820/101‑1 (MQ=255) tgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCG‑TG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATc < 1:6391924/101‑1 (MQ=255) gaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCG‑TG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCg < 1:6760842/101‑1 (MQ=255) aCCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGa > 1:4144650/1‑101 (MQ=255) ccGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑CGTG‑AGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGac < 1:5294527/101‑2 (MQ=255) cGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAttttt < 1:10695431/101‑1 (MQ=255) cGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTG‑C‑GTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGActtcc < 1:13973033/101‑3 (MQ=255) ggTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAtttttt > 1:6367562/1‑101 (MQ=255) aTCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCt > 1:8401873/1‑101 (MQ=255) aTCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCt > 1:13346858/1‑101 (MQ=255) tCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTc > 1:13747336/1‑101 (MQ=255) tCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTc < 1:11185267/101‑1 (MQ=255) ccTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCg > 1:3006430/1‑101 (MQ=255) ctgctgGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCgg < 1:11440066/101‑1 (MQ=255) ctgctgGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCgg < 1:552005/101‑1 (MQ=255) ctgGCGGACATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTAAATATCGATTTTTTGCTCGGCTa < 1:6121179/101‑1 (MQ=255) gCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTAttt > 1:11622384/1‑101 (MQ=255) cGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTg > 1:7439870/1‑101 (MQ=255) cGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTg < 1:3840893/101‑1 (MQ=255) ggAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGTATATCGATTTTTTGCTCGGCTATTTGa < 1:2292028/101‑1 (MQ=255) gagaTCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGaa > 1:933012/1‑101 (MQ=255) agaTCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGaaa < 1:9632573/101‑1 (MQ=255) gaTCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAag < 1:5659244/101‑1 (MQ=255) cAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGtt > 1:3110569/1‑101 (MQ=255) cAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtgct > 1:11339144/1‑101 (MQ=255) cAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtgct < 1:9885857/101‑1 (MQ=255) gACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGcc > 1:10796120/1‑101 (MQ=255) aCCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCcg > 1:1613302/1‑101 (MQ=255) aCCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCcg < 1:12215007/101‑1 (MQ=255) ccGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCcgc > 1:2665460/1‑101 (MQ=255) ccGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCcgc > 1:9023644/1‑101 (MQ=255) ctgctg‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCgcggcg > 1:9567406/1‑101 (MQ=255) ctgctg‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCgcggcg < 1:5047408/101‑1 (MQ=255) gctg‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTc > 1:13597669/1‑101 (MQ=255) ctgttgcgtgaGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCgcagcg > 1:14274607/11‑101 (MQ=255) tg‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCt > 1:9763867/1‑101 (MQ=255) g‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTg > 1:8183926/1‑101 (MQ=255) g‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTg > 1:7159100/1‑101 (MQ=255) gcgtgaGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCccag > 1:13927677/6‑99 (MQ=255) a‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGa < 1:4929253/101‑1 (MQ=255) a‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGa < 1:10568080/101‑1 (MQ=255) a‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGa < 1:5860140/101‑1 (MQ=255) tGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGAc > 1:3610486/1‑101 (MQ=255) gTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTaa > 1:1187801/1‑101 (MQ=255) gTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTaa < 1:1906134/101‑1 (MQ=255) cGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCCCAGATCTgaaga > 1:6974424/1‑99 (MQ=255) gACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAGAt < 1:7893228/101‑1 (MQ=255) gACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAAt > 1:8809058/1‑101 (MQ=255) cacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCa < 1:8538206/101‑1 (MQ=255) cacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCa > 1:2614532/1‑101 (MQ=255) acTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCAt < 1:12459127/101‑1 (MQ=255) tATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTa > 1:798394/1‑101 (MQ=255) caTCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTa > 1:9529675/2‑101 (MQ=255) aTCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTAt > 1:8568819/1‑101 (MQ=255) aTCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTAt > 1:1256947/1‑101 (MQ=255) tCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATc > 1:5961525/1‑101 (MQ=255) tattGACGAAGCGCACGAACGCGGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACtt < 1:6072944/101‑1 (MQ=255) tattGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACtt > 1:5178823/1‑101 (MQ=255) tattGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACtt > 1:6609772/1‑101 (MQ=255) tGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcg < 1:14117746/101‑1 (MQ=255) gACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcgc > 1:539387/1‑101 (MQ=255) gACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcgc < 1:3846438/101‑1 (MQ=255) aCGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcgcg < 1:1276690/101‑1 (MQ=255) | TAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTG‑A‑TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCG > NC_007779/1485265‑1485464 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |