| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,485,404 | C→G | 9.2% | L191L (CTC→CTG) | hrpA → | ATP‑dependent helicase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 1,485,404 | 0 | C→G | 9.2% | 64.9 ‑4.1 ‑0.2 | 250 | L191L (CTC→CTG) | hrpA | ATP‑dependent helicase |
| Reads supporting (aligned to +/- strand): new base (18/5): ref base (117/109): total (136/114) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.61e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.02e-01 | ||||||||||
Only 100 of 258 total aligned reads displayed.
TCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATG > NC_007779/1485304‑1485504 | ccTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCg > 1:3006430/1‑101 (MQ=255) ctgctgGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCgg < 1:11440066/101‑1 (MQ=255) gctgGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCt > 1:10716710/1‑101 (MQ=255) tgGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTAt > 1:1698918/1‑101 (MQ=255) gCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTAttt < 1:13182672/101‑1 (MQ=255) cGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTg > 1:8044942/1‑101 (MQ=255) cGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTg < 1:8217490/101‑1 (MQ=255) cGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTg < 1:6048684/101‑1 (MQ=255) cGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTg < 1:3840893/101‑1 (MQ=255) cGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTg > 1:7439870/1‑101 (MQ=255) gagaTCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGaa < 1:14131094/101‑1 (MQ=255) gagaTCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGaa < 1:8146920/101‑1 (MQ=255) agaTCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGaaa < 1:9632573/101‑1 (MQ=255) gaTCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAag < 1:5659244/101‑1 (MQ=255) aTCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAaga > 1:9689324/1‑101 (MQ=255) tCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAagag < 1:6236081/101‑1 (MQ=255) tCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAagag > 1:7685877/1‑101 (MQ=255) tCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAagag < 1:10941179/101‑1 (MQ=255) cAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGt‑t > 1:7422392/1‑101 (MQ=255) cAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑tgct > 1:11339144/1‑101 (MQ=255) aaGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑tgctg > 1:10195563/1‑101 (MQ=255) aaGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑tgctg > 1:13946378/1‑101 (MQ=255) aaGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑tgctg > 1:4132329/1‑101 (MQ=255) aGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑tgctgc < 1:12698040/101‑1 (MQ=255) gACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGcc < 1:12325681/101‑1 (MQ=255) gACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGcc > 1:10796120/1‑101 (MQ=255) ccGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCcgc > 1:2665460/1‑101 (MQ=255) ccGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCcgc > 1:9023644/1‑101 (MQ=255) cGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCcgcg > 1:6845397/1‑101 (MQ=255) gCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCgcgg > 1:2311683/1‑101 (MQ=255) ctgttgcgtgaGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATA‑TTCTGCCgcagcg > 1:12191235/11‑101 (MQ=255) ctgctgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCgcggcg > 1:4822295/1‑101 (MQ=255) ctgctgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCgcggcg < 1:7996966/101‑1 (MQ=255) ctgctgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCgcggcg > 1:9567406/1‑101 (MQ=255) tgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGCGT‑TGCTGCCGCGGCGTCCt > 1:5111056/1‑101 (MQ=255) gATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTg > 1:8183926/1‑101 (MQ=255) gATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTg > 1:7159100/1‑101 (MQ=255) aTGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGa < 1:4929253/101‑1 (MQ=255) aTGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGa < 1:5860140/101‑1 (MQ=255) gTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTaa < 1:1906134/101‑1 (MQ=255) aCGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTaaaa > 1:9336917/1‑101 (MQ=255) cGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGTTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTaaaaa > 1:11519723/1‑101 (MQ=255) cGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTaaaaa > 1:13632801/1‑101 (MQ=255) cGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATA‑TTCTGCCGCAGCGCCCAGATCTgaaga > 1:6974424/1‑99 (MQ=255) gACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAAt > 1:2246341/1‑101 (MQ=255) gACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAAt > 1:79173/1‑101 (MQ=255) cacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCa > 1:5800604/1‑101 (MQ=255) cacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCa < 1:637486/101‑1 (MQ=255) cacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCa < 1:8538206/101‑1 (MQ=255) acTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCAt < 1:6488273/101‑1 (MQ=255) acTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCAt < 1:12459127/101‑1 (MQ=255) caTCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTa > 1:9529675/2‑101 (MQ=255) aTCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTAt > 1:14013319/1‑101 (MQ=255) aTCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTAt > 1:1256947/1‑101 (MQ=255) tCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATc > 1:5961525/1‑101 (MQ=255) ttattGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACt < 1:442645/101‑1 (MQ=255) attGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTc < 1:3066516/101‑1 (MQ=255) attGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTc > 1:10535725/1‑101 (MQ=255) ttGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTcc < 1:13677196/101‑1 (MQ=255) tGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcg < 1:556018/101‑1 (MQ=255) tGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcg < 1:7605098/101‑1 (MQ=255) gACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcgc > 1:539387/1‑101 (MQ=255) gACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcgc > 1:10629122/1‑101 (MQ=255) atgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCggcg < 1:9858845/96‑1 (MQ=255) gaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGAc > 1:3270229/4‑101 (MQ=255) aaGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACt < 1:13099925/101‑1 (MQ=255) gcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTT‑AAAGCATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGACGAttg > 1:9758639/1‑99 (MQ=255) aCGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAc > 1:7326263/1‑101 (MQ=255) cGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAcc < 1:2928474/101‑1 (MQ=255) cGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAcc > 1:7539695/1‑101 (MQ=255) cGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAcc < 1:12227652/101‑1 (MQ=255) gAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAccc > 1:8292949/1‑101 (MQ=255) gCAGCCTGAATATCGATTTTTTGCTAGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGaa > 1:10324551/1‑101 (MQ=255) cAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAAc < 1:4713421/101‑1 (MQ=255) ccTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCt < 1:14304889/101‑1 (MQ=255) gAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCtttt < 1:6428553/101‑1 (MQ=255) aaTATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTc < 1:9744759/101‑1 (MQ=255) aaTATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTc > 1:5312239/1‑101 (MQ=255) aaTATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTc < 1:2923860/101‑1 (MQ=255) atatCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTcg > 1:13413851/1‑101 (MQ=255) tatCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTcgc < 1:3983307/101‑1 (MQ=255) atCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTcgcg < 1:9445974/101‑1 (MQ=255) tCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCgcgc < 1:3739827/101‑1 (MQ=255) cGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGcc > 1:14196310/1‑101 (MQ=255) aTTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCAc < 1:13913247/101‑1 (MQ=255) ttttttGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACt > 1:8582899/1‑101 (MQ=255) ttttttGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACt < 1:6085140/101‑1 (MQ=255) tttttGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACtt > 1:11107638/1‑101 (MQ=255) ttttGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACttt > 1:1564368/1‑101 (MQ=255) tttGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTta < 1:8562717/101‑1 (MQ=255) ttGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaa < 1:11732606/101‑1 (MQ=255) ttGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaa > 1:181486/1‑101 (MQ=255) ttGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaa < 1:11249740/101‑1 (MQ=255) gCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaata < 1:3119927/101‑1 (MQ=255) cTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaataa > 1:9190163/1‑101 (MQ=255) cTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaataa > 1:6603607/1‑101 (MQ=255) cTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaataa < 1:7036693/101‑1 (MQ=255) tCGGCTATTTGAAATAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTaataat < 1:10068282/101‑1 (MQ=255) tCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTaataat < 1:8927265/101‑1 (MQ=255) cGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATg > 1:3881668/1‑101 (MQ=255) | TCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATG > NC_007779/1485304‑1485504 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |