| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,485,440 | C→T | 6.9% | D203D (GAC→GAT) | hrpA → | ATP‑dependent helicase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 1,485,440 | 0 | C→T | 6.9% | 38.9 ‑2.0 ‑0.4 | 259 | D203D (GAC→GAT) | hrpA | ATP‑dependent helicase |
| Reads supporting (aligned to +/- strand): new base (13/5): ref base (124/117): total (137/122) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.40e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.16e-01 | ||||||||||
Only 100 of 264 total aligned reads displayed.
TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTATCCGG > NC_007779/1485340‑1485540 | aGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTa > 1:4304287/1‑101 (MQ=255) gTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTaa < 1:1906134/101‑1 (MQ=255) gTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTaa > 1:1187801/1‑101 (MQ=255) cGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTaaaaa > 1:7115978/1‑101 (MQ=255) gACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAAt < 1:11485035/101‑1 (MQ=255) gACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAAt > 1:2246341/1‑101 (MQ=255) gACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAAt > 1:79173/1‑101 (MQ=255) cacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCa > 1:5800604/1‑101 (MQ=255) cacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCa < 1:8538206/101‑1 (MQ=255) acTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCAt < 1:6488273/101‑1 (MQ=255) caTCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTa > 1:13104788/2‑101 (MQ=255) caTCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTa > 1:9529675/2‑101 (MQ=255) aTCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTAt > 1:12441760/1‑101 (MQ=255) aTCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTAt > 1:8568819/1‑101 (MQ=255) aTCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTAt > 1:14013319/1‑101 (MQ=255) tCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATc > 1:1551452/1‑101 (MQ=255) tattGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACtt > 1:5178823/1‑101 (MQ=255) catcgatgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACtt > 1:10732479/11‑101 (MQ=255) attGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTc > 1:10535725/1‑101 (MQ=255) atctatgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTc < 1:12544243/92‑1 (MQ=255) atcgatgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTc > 1:12570509/10‑101 (MQ=255) ttGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTcc < 1:8949986/101‑1 (MQ=255) ttGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTcc < 1:2766679/101‑1 (MQ=255) ttGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTcc < 1:13677196/101‑1 (MQ=255) tcgatgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATA‑TTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTcg > 1:10700176/9‑100 (MQ=255) tGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcg < 1:14117746/101‑1 (MQ=255) tGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcg < 1:556018/101‑1 (MQ=255) gACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcgc < 1:3846438/101‑1 (MQ=255) gACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcgc > 1:539387/1‑101 (MQ=255) aGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTa > 1:10802823/1‑101 (MQ=255) gcgcACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTAt < 1:7595305/101‑1 (MQ=255) gcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTT‑AAAGCATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGACGAttg > 1:9758639/1‑99 (MQ=255) cGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAcc < 1:7435543/101‑1 (MQ=255) cGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAcc < 1:2928474/101‑1 (MQ=255) gAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAccc > 1:6023040/1‑101 (MQ=255) gAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAccc < 1:5836149/101‑1 (MQ=255) aaCGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCg < 1:8262485/101‑1 (MQ=255) aCGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCgg < 1:7292642/101‑1 (MQ=255) gCAGCCTGAATATCGATTTTTTGCTAGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGaa > 1:10324551/1‑101 (MQ=255) cAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAAc < 1:4713421/101‑1 (MQ=255) cAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAAc < 1:6588786/101‑1 (MQ=255) aGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACg > 1:1983282/1‑101 (MQ=255) aGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACg < 1:14255248/101‑1 (MQ=255) aGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCGAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACg > 1:9691580/1‑101 (MQ=255) gCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGc < 1:6345790/101‑1 (MQ=255) ccTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCt > 1:9606920/1‑101 (MQ=255) tGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCttt < 1:10374987/101‑1 (MQ=255) gAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCtttt < 1:6428553/101‑1 (MQ=255) aaTATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTc > 1:4440450/1‑101 (MQ=255) tatCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTcgc < 1:3983307/101‑1 (MQ=255) atCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTcgcg < 1:9445974/101‑1 (MQ=255) tCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCgcgc < 1:3739827/101‑1 (MQ=255) cGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGcc > 1:10999841/1‑101 (MQ=255) gATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCa < 1:2960507/101‑1 (MQ=255) aTTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCAc < 1:13913247/101‑1 (MQ=255) ttttttGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACt < 1:6085140/101‑1 (MQ=255) tttttGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACtt > 1:11107638/1‑101 (MQ=255) tttttGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACtt > 1:7673133/1‑101 (MQ=255) tttGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTta < 1:6945046/101‑1 (MQ=255) tttGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTta < 1:8562717/101‑1 (MQ=255) ttGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaa > 1:12315631/1‑101 (MQ=255) ttGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaa < 1:11249740/101‑1 (MQ=255) ttGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaa < 1:11732606/101‑1 (MQ=255) ttGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaa > 1:181486/1‑101 (MQ=255) gCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaata < 1:3119927/101‑1 (MQ=255) cTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaataa < 1:7360041/101‑1 (MQ=255) cTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaataa < 1:8634134/101‑1 (MQ=255) cTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaataa > 1:9190163/1‑101 (MQ=255) cTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaataa < 1:7036693/101‑1 (MQ=255) tCGGCTATTTGAAATAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTaataat < 1:10068282/101‑1 (MQ=255) tCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTaataat < 1:8353172/101‑1 (MQ=255) cGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATg > 1:3881668/1‑101 (MQ=255) cGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATg < 1:8073841/101‑1 (MQ=255) aTTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCg > 1:9011316/1‑101 (MQ=255) tttGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGa < 1:9739878/101‑1 (MQ=255) gAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGatta > 1:2884222/1‑101 (MQ=255) gAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGatta < 1:7517254/101‑1 (MQ=255) aaGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGattatt < 1:10089895/101‑1 (MQ=255) aaGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGattatt > 1:5500701/1‑101 (MQ=255) agagT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCTCCACTTTAATAATGCGCCGATTATTg > 1:8611178/1‑101 (MQ=255) gagT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGa < 1:4828316/101‑1 (MQ=255) gagT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGa < 1:1570543/101‑1 (MQ=255) agT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGaa > 1:887138/1‑101 (MQ=255) t‑tGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGt > 1:4510374/1‑101 (MQ=255) ctgcCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGtctc > 1:2152079/1‑101 (MQ=255) gcCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGCCCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCg < 1:498336/101‑1 (MQ=255) gcCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCg < 1:13146995/101‑1 (MQ=255) ccGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCgg > 1:12580089/1‑101 (MQ=255) cgcgGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGt > 1:7864444/1‑101 (MQ=255) cggcgTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCg < 1:2588000/101‑1 (MQ=255) cggcgTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCg < 1:13555811/101‑1 (MQ=255) cggcgTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCg < 1:1731405/101‑1 (MQ=255) ggcgTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCgg < 1:3426009/101‑1 (MQ=255) gcgTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGa > 1:10864382/1‑101 (MQ=255) cgTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGAc < 1:12797199/101‑1 (MQ=255) tCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCt > 1:6671622/1‑101 (MQ=255) ccTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTa < 1:7993956/101‑1 (MQ=255) ccTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTa < 1:11640041/101‑1 (MQ=255) gACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTATcc > 1:3540766/1‑101 (MQ=255) ccTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTATCCgg > 1:5647664/1‑101 (MQ=255) | TGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGT‑TGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGGACCTATCCGG > NC_007779/1485340‑1485540 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |