| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,539,877 | T→C | 2.7% | I231V (ATC→GTC) | narY ← | nitrate reductase 2 (NRZ) subunit beta |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 1,539,877 | 0 | T→C | 2.7% | 5.6 ‑0.4 ‑0.0 | 223 | I231V (ATC→GTC) | narY | nitrate reductase 2 (NRZ) subunit beta |
| Reads supporting (aligned to +/- strand): new base (2/4): ref base (105/112): total (107/116) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.85e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.84e-01 | ||||||||||
Only 100 of 242 total aligned reads displayed.
CCCACGCAGGTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCC > NC_007779/1539777‑1539976 | cccACGCAGGTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGAt > 1:1692954/1‑101 (MQ=255)cccACGCAGGTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGAt < 1:9110466/101‑1 (MQ=255) aCGCAGGTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGAtttt > 1:4136130/1‑101 (MQ=255) aCGCAGGTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGAtttt < 1:5489907/101‑1 (MQ=255) aCGCAGGTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGAtttt < 1:7193288/101‑1 (MQ=255) cGCAGGTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGAttttt < 1:4741335/101‑1 (MQ=255) gCAGGTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGAtttttt > 1:4521408/1‑101 (MQ=255) gCAGGTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGAtttttt > 1:5107347/1‑101 (MQ=255) cAGGTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGAttttttt < 1:8570078/101‑1 (MQ=255) cAGGTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGAttttttt > 1:7474924/1‑101 (MQ=255) aGGTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTg < 1:8878928/101‑1 (MQ=255) ggTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGt < 1:2686365/101‑1 (MQ=255) tttCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTAc > 1:10055236/1‑101 (MQ=255) tttCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTAc > 1:10988995/1‑101 (MQ=255) ttCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACg < 1:14124267/101‑1 (MQ=255) tCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACgg < 1:3211525/101‑1 (MQ=255) cTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGa < 1:11694019/101‑1 (MQ=255) tGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGAc > 1:13251714/1‑101 (MQ=255) acacGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCg < 1:11504254/101‑1 (MQ=255) cggtcggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑tt > 1:113572/1‑101 (MQ=255) ggtcggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTa > 1:6898939/1‑101 (MQ=255) gtcggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTAt < 1:7825044/101‑1 (MQ=255) cggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGc < 1:14327844/101‑1 (MQ=255) ggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGca < 1:2972993/101‑1 (MQ=255) ggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGca < 1:5985391/101‑1 (MQ=255) gtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGcac < 1:10573470/101‑1 (MQ=255) ttGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACGACCGC‑TTATGcaca > 1:12479706/1‑101 (MQ=255) ttGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGcaca > 1:11576920/1‑101 (MQ=255) ttGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGcaca > 1:11915564/1‑101 (MQ=255) ggcctggcTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACaaa < 1:3839989/94‑1 (MQ=255) gACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACaaa > 1:6063417/1‑101 (MQ=255) aCCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAAc > 1:6277722/1‑101 (MQ=255) aCCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAAc < 1:12905889/101‑1 (MQ=255) ccGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACg < 1:3228974/101‑1 (MQ=255) cGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACgc < 1:4326277/101‑1 (MQ=255) gACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACgcca < 1:4660191/101‑1 (MQ=255) gACTCAATTCGTGGGCAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACgcca < 1:12180229/101‑1 (MQ=255) aCTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACgccag > 1:12798481/1‑101 (MQ=255) cTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTTGACCGACCACCCCTTTTTGCACAAAGgcaac > 1:2800967/1‑98 (MQ=21) aaTTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCAc > 1:4997089/1‑101 (MQ=255) aTTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACg < 1:11764157/101‑1 (MQ=255) ttCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACgg < 1:3389598/101‑1 (MQ=255) ttCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACgg > 1:7235817/1‑101 (MQ=255) cGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCa < 1:9763837/101‑1 (MQ=255) cGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCa < 1:10753340/101‑1 (MQ=255) tGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTA‑GGACAACCGC‑CTTTTCACCAACCGCAACCACCGCCttt > 1:515364/1‑101 (MQ=21) gggTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCAttt > 1:89772/1‑101 (MQ=255) gTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTAt > 1:11470523/1‑101 (MQ=255) gTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTAt > 1:125750/1‑101 (MQ=255) tAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATc < 1:6700310/101‑1 (MQ=255) aaCAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCGAGCCACGGCATTTATcc > 1:10098287/1‑101 (MQ=255) aaCAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATcc > 1:13801777/1‑101 (MQ=255) aCAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCt > 1:3568924/1‑101 (MQ=255) aCAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCt > 1:2443656/1‑101 (MQ=255) cAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTg > 1:2550117/1‑101 (MQ=255) gaagaTGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGat < 1:12634630/101‑1 (MQ=255) aagaTGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGatc > 1:7568314/1‑101 (MQ=255) gCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGatcaatca < 1:2194598/101‑1 (MQ=255) cATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAg < 1:1599641/101‑1 (MQ=255) cATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTAGCCTGATCAATCAg < 1:7112681/101‑1 (MQ=255) ttttCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGcac > 1:7665387/1‑101 (MQ=255) tttCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGcaca > 1:13297577/1‑101 (MQ=255) tttCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGcaca > 1:6381007/1‑101 (MQ=255) ttCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACaa > 1:13928117/1‑101 (MQ=255) ttCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACaa < 1:1131575/101‑1 (MQ=255) ttCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACaa < 1:5346523/101‑1 (MQ=255) tCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAAt > 1:11928571/1‑101 (MQ=255) tCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAAt < 1:12879291/101‑1 (MQ=255) tGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGc > 1:10454366/1‑101 (MQ=255) cTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGt > 1:13552269/1‑101 (MQ=255) cTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGt > 1:1081269/1‑101 (MQ=255) tGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGtct < 1:7456114/101‑1 (MQ=255) gCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGTCACGGCATTTATCCTGATCAATCAGCACAATGCCGtctt > 1:9698414/1‑101 (MQ=255) cGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGtcttct > 1:4342558/1‑101 (MQ=255) ggtcttgtggTTGAAGTAGACCTTCTTGTAGGGGCAACCGG‑AGACGCACATGCGCCAACCGAGGCAGCGGTCCTGGTCGACCAGCACAATGCCGtcttctg > 1:13728520/10‑100 (MQ=255) cTTTTCCAGTTGAAGTAGATTTTTTTGTCCGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCttcttc < 1:5650597/101‑1 (MQ=255) cTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCttcttc < 1:13485819/101‑1 (MQ=255) cTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCttcttc < 1:9416577/101‑1 (MQ=255) ttttCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTcg < 1:9540493/101‑1 (MQ=255) ttttCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTcg < 1:6570632/101‑1 (MQ=255) ttttCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTcg > 1:1979732/1‑101 (MQ=255) cttgtggTTGAAGTAGACCTTCTTGTAGGGGCAACCGG‑AGACGCACATGCGCCAACCGCGGCAGCGGTCCTGGTCGACCAGCACAATGCCGtcttctgtgc > 1:5474064/7‑97 (MQ=255) ttCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTcgcg < 1:2840017/101‑1 (MQ=255) ccAGTTGAAGTAGATTTTTTTGTACTGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGtt > 1:313728/1‑101 (MQ=255) ccAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGtt < 1:8234762/101‑1 (MQ=255) aGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTg < 1:6826055/101‑1 (MQ=255) ttGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTa > 1:5047113/1‑101 (MQ=255) gAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGa < 1:1754699/101‑1 (MQ=255) gAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGa > 1:6496252/1‑101 (MQ=255) gAAGTAGACCTTCTTGTAGGGGCAACCGG‑AGACGCACATGCGCCAACCGCGGCAGCGGTCCTGGTCGACCAGCACAATGCCGTCTTCTGTGCGTTTGTaca < 1:5889810/101‑3 (MQ=255) gAAGTAGACCTTCTTGTAGGGGCAACCGG‑AGACGCACATGCGCCAACCGCGGCAGCGGTCCTGGTCGACCAGCACAATGCCGTCTTCTGTGCGTTTGTaca < 1:3350705/101‑3 (MQ=255) agtttttttttttGTAGGGACACCCTT‑TTATGCACAACCGCCAGCCACGTCTTTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATa < 1:9198226/95‑1 (MQ=255) aGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATa < 1:1506551/101‑1 (MQ=255) gTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAg < 1:1314175/101‑1 (MQ=255) gTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAg > 1:13804491/1‑101 (MQ=255) gTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAg < 1:10243207/101‑1 (MQ=255) gTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAg < 1:14152649/101‑1 (MQ=255) gTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAg < 1:1563382/101‑1 (MQ=255) aGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAgcg > 1:8759608/1‑101 (MQ=255) gATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAgcgc < 1:13637418/101‑1 (MQ=255) | CCCACGCAGGTTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCC > NC_007779/1539777‑1539976 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |