| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,539,887 | C→G | 3.8% | P227P (CCG→CCC) | narY ← | nitrate reductase 2 (NRZ) subunit beta |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 1,539,887 | 0 | C→G | 3.8% | 14.5 ‑1.8 ‑0.0 | 238 | P227P (CCG→CCC) | narY | nitrate reductase 2 (NRZ) subunit beta |
| Reads supporting (aligned to +/- strand): new base (2/7): ref base (113/114): total (117/121) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.73e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.95e-01 | ||||||||||
Only 100 of 247 total aligned reads displayed.
TTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGG > NC_007779/1539787‑1539987 | tttCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTAc > 1:10055236/1‑101 (MQ=255) tCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACgg < 1:9343275/101‑1 (MQ=255) tCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACgg < 1:3211525/101‑1 (MQ=255) cTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGa < 1:3904680/101‑1 (MQ=255) cTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGa < 1:11694019/101‑1 (MQ=255) cTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGa > 1:1327955/1‑101 (MQ=255) cTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGa < 1:13407168/101‑1 (MQ=255) acacGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCg < 1:11504254/101‑1 (MQ=255) cggtcggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑tt > 1:113572/1‑101 (MQ=255) ggtcggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTa > 1:4899961/1‑101 (MQ=255) ggtcggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTa > 1:6898939/1‑101 (MQ=255) ggtcggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTa < 1:749781/101‑1 (MQ=255) cggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGc > 1:2087585/1‑101 (MQ=255) ggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGca < 1:5985391/101‑1 (MQ=255) ggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGca < 1:2972993/101‑1 (MQ=255) gtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGcac < 1:10573470/101‑1 (MQ=255) gtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGcac > 1:2657761/1‑101 (MQ=255) ttGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGcaca > 1:11915564/1‑101 (MQ=255) ttGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGcaca > 1:11576920/1‑101 (MQ=255) tGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTATGGACAACCGC‑TTATGCACaa > 1:7171134/1‑101 (MQ=255) tGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACaa < 1:4327354/101‑1 (MQ=255) gACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACaaa > 1:6063417/1‑101 (MQ=255) gACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACaaa > 1:13783005/1‑101 (MQ=255) aCCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAAc > 1:6277722/1‑101 (MQ=255) ccGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACg > 1:12622390/1‑101 (MQ=255) ccGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACg < 1:3228974/101‑1 (MQ=255) cGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACgc > 1:1689349/1‑101 (MQ=255) ggACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACgcc > 1:145630/1‑101 (MQ=255) gACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACgcca < 1:2460418/101‑1 (MQ=255) aCTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACgccag > 1:12798481/1‑101 (MQ=255) cTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTTGACCGACCACCCCTTTTTGCACAAAGgcaac > 1:2800967/1‑98 (MQ=21) cTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACgccagc > 1:512189/1‑101 (MQ=255) tCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACgccagcc > 1:9654894/1‑101 (MQ=255) aTTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACg > 1:4179311/1‑101 (MQ=255) ttCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACgg < 1:3389598/101‑1 (MQ=255) ttCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACgg < 1:1382296/101‑1 (MQ=255) ttCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACgg > 1:7235817/1‑101 (MQ=255) cGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCa < 1:10753340/101‑1 (MQ=255) gggTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTTCGGACAATCGC‑TTATGCACAAACGCCAGCCACGGCAttt > 1:12094714/1‑101 (MQ=255) gTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTAt > 1:11470523/1‑101 (MQ=255) tAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATc > 1:13641602/1‑101 (MQ=255) tAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATc < 1:6700310/101‑1 (MQ=255) aaCAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCGAGCCACGGCATTTATcc > 1:10098287/1‑101 (MQ=255) aaCAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATcc < 1:11102179/101‑1 (MQ=255) aCAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCt > 1:4428646/1‑101 (MQ=255) aCAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCt > 1:3568924/1‑101 (MQ=255) cAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTg > 1:12291687/1‑101 (MQ=255) agaagaTGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGa < 1:13980475/101‑1 (MQ=255) gaagaTGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGat < 1:12918031/101‑1 (MQ=255) gaagaTGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGat < 1:912884/101‑1 (MQ=255) aagaTGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGatc > 1:7568314/1‑101 (MQ=255) cATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAg < 1:1599641/101‑1 (MQ=255) aTTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGc < 1:11820388/101‑1 (MQ=255) aTTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGc < 1:1360444/101‑1 (MQ=255) tttCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGcaca > 1:8927182/1‑101 (MQ=255) tttCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGcaca > 1:6381007/1‑101 (MQ=255) ttCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACaa > 1:13928117/1‑101 (MQ=255) tCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAAt < 1:12879291/101‑1 (MQ=255) cTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATg > 1:7810532/1‑101 (MQ=255) tGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGc > 1:10454366/1‑101 (MQ=255) cTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGt < 1:13802265/101‑1 (MQ=255) cTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGt > 1:12501475/1‑101 (MQ=255) cTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGt > 1:1081269/1‑101 (MQ=255) ttGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGtc > 1:14269469/1‑101 (MQ=255) ttGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGtc > 1:5216053/1‑101 (MQ=255) ttGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGtc < 1:9479365/101‑1 (MQ=255) tGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGtct < 1:7456114/101‑1 (MQ=255) cTTTTCCAGTTGAAGTAGATTTTTTTGTCCGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCttcttc < 1:5650597/101‑1 (MQ=255) cTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCttcttc < 1:13485819/101‑1 (MQ=255) cTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCttcttc < 1:4999503/101‑1 (MQ=255) ttCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTcgcg < 1:2840017/101‑1 (MQ=255) ccAGTTGAAGTAGATTTTTTTGTACTGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGtt > 1:313728/1‑101 (MQ=255) ccAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGtt < 1:8234762/101‑1 (MQ=255) aGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTg < 1:6826055/101‑1 (MQ=255) ttGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTa > 1:9224065/1‑101 (MQ=255) gAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGa < 1:1754699/101‑1 (MQ=255) gAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGa > 1:6496252/1‑101 (MQ=255) gAAGTAGACCTTCTTGTAGGGGCAACCGG‑AGACGCACATGCGCCAACCGCGGCAGCGGTCCTGGTCGACCAGCACAATGCCGTCTTCTGTGCGTTTGTaca < 1:5889810/101‑3 (MQ=255) gAAGTAGACCTTCTTGTAGGGGCAACCGG‑AGACGCACATGCGCCAACCGCGGCAGCGGTCCTGGTCGACCAGCACAATGCCGTCTTCTGTGCGTTTGTaca < 1:5359370/101‑3 (MQ=255) gAAGTAGACCTTCTTGTAGGGGCAACCGG‑AGACGCACATGCGCCAACCGCGGCAGCGGTCCTGGTCGACCAGCACAATGCCGTCTTCTGTGCGTTTGTaca < 1:3350705/101‑3 (MQ=255) gTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAg < 1:1314175/101‑1 (MQ=255) gTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAg < 1:1563382/101‑1 (MQ=255) gTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAg < 1:10243207/101‑1 (MQ=255) gTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAg < 1:14152649/101‑1 (MQ=255) gTAAATTTTTTTGTACGG‑CAACCCG‑CTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAgc < 1:2427278/101‑1 (MQ=25) aGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAgcg > 1:8759608/1‑101 (MQ=255) aTTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGcgcc < 1:5479907/101‑1 (MQ=255) aTTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGcgcc > 1:5103381/1‑101 (MQ=255) tttttGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCt < 1:9754391/101‑1 (MQ=255) ttttGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCtt < 1:4650319/101‑1 (MQ=255) ttttGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGCCTTCTTCGCGTTTGTAGATAGCGCCGCtt < 1:4285866/101‑1 (MQ=255) tttGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTg > 1:13542449/1‑101 (MQ=255) cttGTAGGGGCAACCGG‑AGACGCACATGCGCCAACCGCGGCAGCGGTCCTGGTCGACCAGCACAATGCCGTCTTCTGTGCGTTTGTACATCGcgcccgatg < 1:8572484/100‑6 (MQ=255) ttGTAGGGGCAACCGG‑AGACGCACATGCGCCAACCGCGGCAGCGGTCCTGGTCGACCAGCACAATGCCGTCTTCTGTGCGTTTGTACATCGcgcccgatgg < 1:8981800/101‑7 (MQ=255) ttGTAGGGGCAACCGG‑AGACGCACATGCGCCAACCGCGGCAGCGGTCCTGGTCGACCAGCACAATGCCGTCTTCTGTGCGTTTGTACATCGcgcccgatgg < 1:6584987/101‑7 (MQ=255) ttGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTgg < 1:9785547/101‑1 (MQ=255) tGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTggg > 1:794569/1‑101 (MQ=255) gTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGc < 1:12603235/101‑1 (MQ=255) gTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGc > 1:6529080/1‑101 (MQ=255) cGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAgg < 1:3741152/101‑1 (MQ=255) | TTTCTGAGCACACGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGG > NC_007779/1539787‑1539987 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |