| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,539,899 | T→G | 3.6% | I223I (ATA→ATC) | narY ← | nitrate reductase 2 (NRZ) subunit beta |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 1,539,899 | 0 | T→G | 3.6% | 14.9 ‑1.8 ‑0.0 | 246 | I223I (ATA→ATC) | narY | nitrate reductase 2 (NRZ) subunit beta |
| Reads supporting (aligned to +/- strand): new base (2/7): ref base (119/118): total (121/125) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.72e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.99e-01 | ||||||||||
Only 100 of 255 total aligned reads displayed.
CGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGC > NC_007779/1539799‑1539999 | ggtcggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTa > 1:8447160/1‑101 (MQ=255) ggtcggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTa < 1:749781/101‑1 (MQ=255) ggtcggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTa > 1:4899961/1‑101 (MQ=255) gtcggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTAt < 1:7825044/101‑1 (MQ=255) gtcggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTAt < 1:6556418/101‑1 (MQ=255) cggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGc < 1:14327844/101‑1 (MQ=255) cggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGc > 1:2087585/1‑101 (MQ=255) ggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGca < 1:2972993/101‑1 (MQ=255) ggtTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGca < 1:5985391/101‑1 (MQ=255) ttGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGcaca < 1:322465/101‑1 (MQ=255) cGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACgc > 1:1689349/1‑101 (MQ=255) cGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACgc > 1:6095765/1‑101 (MQ=255) ggACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACgcc > 1:10397753/1‑101 (MQ=255) gACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACgcca < 1:2460418/101‑1 (MQ=255) gACTCAATTCGTGGGCAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACgcca < 1:12180229/101‑1 (MQ=255) cTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTTGACCGACCACCCCTTTTTGCACAAAGgcaac > 1:2800967/1‑98 (MQ=21) cTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACgccagc > 1:512189/1‑101 (MQ=255) aaTTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCAc > 1:10220984/1‑101 (MQ=255) ttCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACgg < 1:1382296/101‑1 (MQ=255) ttCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACgg < 1:3389598/101‑1 (MQ=255) ttCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACgg > 1:7235817/1‑101 (MQ=255) ttCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACgg < 1:10722645/101‑1 (MQ=255) tCGTGGGTAACAGAAGATGCA‑TTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCa > 1:11628795/1‑101 (MQ=255) cGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCa < 1:9763837/101‑1 (MQ=255) tAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATc > 1:13641602/1‑101 (MQ=255) aaCAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATcc < 1:11102179/101‑1 (MQ=255) cAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCTTTTATCCTg > 1:7016338/1‑101 (MQ=255) gaagaTGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGat > 1:11538834/1‑101 (MQ=255) gaagaTGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGat < 1:13770436/101‑1 (MQ=255) gaagaTGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGat < 1:12918031/101‑1 (MQ=255) gaagaTGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGat > 1:7344888/1‑101 (MQ=255) gaagaTGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGat < 1:12634630/101‑1 (MQ=255) aagaTGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGatc < 1:5917579/101‑1 (MQ=255) agaTGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGatca < 1:11748025/101‑1 (MQ=255) gaTGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGatcaa > 1:3264962/1‑101 (MQ=255) gaTGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGatcaa < 1:13163858/101‑1 (MQ=255) gaTGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGAACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGatcaa > 1:8972710/1‑101 (MQ=255) gCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGatcaatca < 1:2194598/101‑1 (MQ=255) gCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGatcaatca < 1:14151333/101‑1 (MQ=255) cATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAg < 1:1599641/101‑1 (MQ=255) ttttCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGcac > 1:7665387/1‑101 (MQ=255) tttCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGcaca < 1:12747286/101‑1 (MQ=255) ttCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACaa > 1:13928117/1‑101 (MQ=255) tCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAAt > 1:11928571/1‑101 (MQ=255) tCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAAt < 1:12879291/101‑1 (MQ=255) tGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGc > 1:2595791/1‑101 (MQ=255) cTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGt < 1:1136220/101‑1 (MQ=255) cTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGt < 1:13802265/101‑1 (MQ=255) cTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGt > 1:12501475/1‑101 (MQ=255) ttGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGtc > 1:5216053/1‑101 (MQ=255) ttGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGtc < 1:9479365/101‑1 (MQ=255) tGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGtct > 1:3125971/1‑101 (MQ=255) ccGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGtcttc > 1:6745545/1‑101 (MQ=255) cGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGtcttct > 1:4342558/1‑101 (MQ=255) cGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGtcttct > 1:4379240/1‑101 (MQ=255) cTTTTCCAGTTGAAGTAGATTTTTTTGTCCGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCttcttc < 1:5650597/101‑1 (MQ=255) cTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCttcttc < 1:9416577/101‑1 (MQ=255) cTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCttcttc < 1:4999503/101‑1 (MQ=255) ttttCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTcg < 1:11912253/101‑1 (MQ=255) ttCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTcgcg < 1:2840017/101‑1 (MQ=255) aGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTg < 1:6826055/101‑1 (MQ=255) ttGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTa > 1:9224065/1‑101 (MQ=255) tGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAg < 1:8585698/101‑1 (MQ=255) tGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAg > 1:8115910/1‑101 (MQ=255) gAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGa > 1:6496252/1‑101 (MQ=255) gAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGa < 1:6315294/101‑1 (MQ=255) gAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGa < 1:1754699/101‑1 (MQ=255) gAAGTAGACCTTCTTGTAGGGGCAACCGG‑AGACGCACATGCGCCAACCGCGGCAGCGGTCCTGGTCGACCAGCACAATGCCGTCTTCTGTGCGTTTGTaca < 1:5359370/101‑3 (MQ=255) aaGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGAt < 1:10085256/101‑1 (MQ=255) aGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATa < 1:1506551/101‑1 (MQ=255) aGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAgcg > 1:8759608/1‑101 (MQ=255) aGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAgcg < 1:14255788/101‑1 (MQ=255) aGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAgcg < 1:7471357/101‑1 (MQ=255) aTTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGcgcc > 1:5103381/1‑101 (MQ=255) ttttGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCtt < 1:4650319/101‑1 (MQ=255) ttttGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGCCTTCTTCGCGTTTGTAGATAGCGCCGCtt < 1:4285866/101‑1 (MQ=255) tttGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTg > 1:13542449/1‑101 (MQ=255) tttGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTg > 1:9683719/1‑101 (MQ=255) tttGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTg < 1:9174565/101‑1 (MQ=255) ttGTAGGGGCAACCGG‑AGACGCACATGCGCCAACCGCGGCAGCGGTCCTGGTCGACCAGCACAATGCCGTCTTCTGTGCGTTTGTACATCGcgcccgatgg < 1:6584987/101‑7 (MQ=255) ttGTAGGGGCAACCGG‑AGACGCACATGCGCCAACCGCGGCAGCGGTCCTGGTCGACCAGCACAATGCCGTCTTCTGTGCGTTTGTACATCGcgcccgatgg < 1:8981800/101‑7 (MQ=255) gTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGc < 1:12603235/101‑1 (MQ=255) gTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGc > 1:4189516/1‑101 (MQ=255) tACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCa > 1:13415677/1‑101 (MQ=255) cGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAgg > 1:3861324/1‑101 (MQ=255) gACACCCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTc < 1:10622721/101‑1 (MQ=255) gACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTc < 1:3467626/101‑1 (MQ=255) aCAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCg < 1:13601691/101‑1 (MQ=255) aCAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCg > 1:12394769/1‑101 (MQ=255) aCAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCg < 1:10903644/101‑1 (MQ=255) cAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGc > 1:383908/1‑101 (MQ=255) cAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGc > 1:6421710/1‑101 (MQ=255) aaCCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGcc > 1:8065359/1‑101 (MQ=255) aCCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCa < 1:3531098/101‑1 (MQ=255) ccGC‑TTATGCACAAACGCCAGCCACTGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCAc > 1:6517619/1‑101 (MQ=255) ccGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCAc > 1:11368976/1‑101 (MQ=255) cGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACg < 1:10498978/101‑1 (MQ=255) cGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACg > 1:957351/1‑101 (MQ=255) gC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGc > 1:5514161/1‑101 (MQ=255) tATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGc > 1:11915170/1‑101 (MQ=255) | CGGTCGGTTGACCGGACTCAATTCGTGGGTAACAGAAGATGCATTTTTCTGACTTGCCGCTTTTCCAGTTGAAGTAGATTTTTTTGTACGGACAACCGC‑TTATGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGC > NC_007779/1539799‑1539999 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |