Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 2,731,858 T→C 4.8% E324E (GAA→GAG)  clpB ← protein disaggregation chaperone

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0077792,731,8580T→C 4.8% 23.2 ‑1.4 ‑0.1249E324E (GAA→GAG) clpBprotein disaggregation chaperone
Reads supporting (aligned to +/- strand):  new base (4/8):  ref base (127/109):  total (132/117)
Fisher's exact test strand distribution p-value = 2.37e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.95e-01

Only 100 of 271 total aligned reads displayed.

CGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGTCCATTGCGC  >  NC_007779/2731758‑2731958
                                                                                                    |                                                                                                    
 gTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCttttt                                                                                                     >  1:4380081/1‑101 (MQ=255)
  tAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTc                                                                                                    >  1:12147866/1‑101 (MQ=255)
  tAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTc                                                                                                    >  1:5857901/1‑101 (MQ=255)
  tAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTc                                                                                                    <  1:6408204/101‑1 (MQ=255)
   agcGTTCCTTCAGGCCACGCAGAATGCCAATGGCGTCCTCAACGCTCGGCTCACCGACAAAGACCTGCTGGAAACGACGCTCCAGCGCAGCATCCTTCTcg                                                                                                   <  1:10995276/99‑2 (MQ=255)
   aaCGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCa                                                                                                   >  1:12710216/1‑101 (MQ=255)
   aaCGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCa                                                                                                   >  1:5913413/1‑101 (MQ=255)
   aaCGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCa                                                                                                   >  1:7520298/1‑101 (MQ=255)
    gcGTTCCTTCAGGCCACGCAGAATGCCAATGGCGTCCTCAACGCTCGGCTCACCGACAAAGACCTGCTGGAAACGACGCTCCAGCGCAGCATCCTTCTcga                                                                                                  <  1:11992727/100‑3 (MQ=255)
    aCGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCaa                                                                                                  <  1:13937434/101‑1 (MQ=255)
     cGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAAt                                                                                                 <  1:7533151/101‑1 (MQ=255)
      gTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATg                                                                                                <  1:258664/101‑1 (MQ=255)
      gTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATg                                                                                                >  1:4980026/1‑101 (MQ=255)
        tccttCAGGCCACGCAGAATGCCAATGGCGTCCTCAACGCTCGGCTCACCGACAAAGACCTGCTGGAAACGACGCTCCAGCGCAGCATCCTTCTCGATGTa                                                                                              <  1:4802334/98‑1 (MQ=255)
         cTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTAc                                                                                             <  1:8564698/101‑1 (MQ=255)
          cttCAGGCCACGCAGAATGCCAATGGCGTCCTCAACGCTCGGCTCACCGACAAAGACCTGCTGGAAACGACGCTCCAGCGCAGCATCCTTCTCGATGTACt                                                                                            >  1:6842925/2‑101 (MQ=255)
           ttCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTg                                                                                           <  1:14291366/101‑1 (MQ=255)
           ttCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTg                                                                                           <  1:7612623/101‑1 (MQ=255)
            tCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTgg                                                                                          >  1:3565040/1‑101 (MQ=255)
            tCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTgg                                                                                          <  1:11195669/101‑1 (MQ=255)
            tCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTgg                                                                                          >  1:9094090/1‑101 (MQ=255)
            tCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTgc                                                                                          >  1:12400209/1‑100 (MQ=255)
             cAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGc                                                                                         >  1:11590043/1‑101 (MQ=255)
              aGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCg                                                                                        <  1:1349123/101‑1 (MQ=255)
              aGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCg                                                                                        <  1:5971258/101‑1 (MQ=255)
               ggCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGa                                                                                       >  1:10666420/1‑101 (MQ=255)
                gCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGat                                                                                      <  1:1640648/101‑1 (MQ=255)
                gCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGat                                                                                      <  1:14207921/101‑1 (MQ=255)
                 ccACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGata                                                                                     <  1:5559684/101‑1 (MQ=255)
                  cACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGatat                                                                                    >  1:7405954/1‑101 (MQ=255)
                   aCGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTGAATGTACTGGCGATAtt                                                                                   >  1:10108938/1‑101 (MQ=255)
                   aCGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATAtt                                                                                   >  1:985146/1‑101 (MQ=255)
                   aCGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATAtt                                                                                   <  1:2272297/101‑1 (MQ=255)
                     gCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCg                                                                                 >  1:1077439/1‑101 (MQ=255)
                      cAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGt                                                                                >  1:9488694/1‑101 (MQ=255)
                      cAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGt                                                                                >  1:1947675/1‑101 (MQ=255)
                      cAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGt                                                                                >  1:10248484/1‑101 (MQ=255)
                       aGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTc                                                                               <  1:3949151/101‑1 (MQ=255)
                       aGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTc                                                                               >  1:504093/1‑101 (MQ=255)
                          aTCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAg                                                                            <  1:13886380/101‑1 (MQ=255)
                          aTCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAg                                                                            >  1:382916/1‑101 (MQ=255)
                          aTCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAg                                                                            >  1:12083437/1‑101 (MQ=255)
                           tCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGc                                                                           <  1:2101272/101‑1 (MQ=255)
                            cGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGcg                                                                          >  1:8279901/1‑101 (MQ=255)
                             gCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGcgt                                                                         <  1:1202426/101‑1 (MQ=255)
                             gCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGcgt                                                                         >  1:8778110/1‑101 (MQ=255)
                              cAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGcgtc                                                                        >  1:8196213/1‑101 (MQ=255)
                               aaTGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGcgtcg                                                                       >  1:892622/1‑101 (MQ=255)
                                aTGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGAGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGcgtcgt                                                                      <  1:13770517/101‑1 (MQ=255)
                                 tGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTg                                                                     <  1:5245100/101‑1 (MQ=255)
                                   gTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGc                                                                   <  1:4256473/101‑1 (MQ=255)
                                    tATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCa                                                                  <  1:12703593/101‑1 (MQ=255)
                                       cTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCt                                                               >  1:7087687/1‑101 (MQ=255)
                                       cTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCt                                                               <  1:7036986/101‑1 (MQ=255)
                                       cTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCt                                                               <  1:12357821/101‑1 (MQ=255)
                                         tCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTGTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTAc                                                             >  1:10189581/1‑101 (MQ=255)
                                           aaCAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCATTGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGc                                                           <  1:407662/101‑1 (MQ=255)
                                            aCAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCa                                                          >  1:8084689/1‑101 (MQ=255)
                                            aCAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCa                                                          >  1:10372435/1‑101 (MQ=255)
                                             cAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAg                                                         <  1:7575417/101‑1 (MQ=255)
                                               gAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTg                                                       <  1:3008427/101‑1 (MQ=255)
                                               gAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTg                                                       >  1:3144117/1‑101 (MQ=255)
                                               gAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTg                                                       >  1:8332322/1‑101 (MQ=255)
                                                 aGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCa                                                     >  1:7842506/1‑101 (MQ=255)
                                                  ggCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCaa                                                    >  1:5121148/1‑101 (MQ=255)
                                                    cTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAAtt                                                  <  1:13146618/101‑1 (MQ=255)
                                                       ggCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTcac                                               >  1:2482691/1‑101 (MQ=255)
                                                       ggCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTcac                                               >  1:5481283/1‑101 (MQ=255)
                                                       ggCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTcac                                               <  1:9207237/101‑1 (MQ=255)
                                                           acaaacaCTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCAcg                                           >  1:6243887/1‑101 (MQ=255)
                                                           acaaacaCTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCAcg                                           >  1:8939804/1‑101 (MQ=255)
                                                            caaacaCTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCAcgc                                          >  1:3688602/1‑101 (MQ=255)
                                                            caaacaCTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCAcgc                                          >  1:4511736/1‑101 (MQ=255)
                                                             aaacaCTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCAcgcg                                         <  1:2839557/101‑1 (MQ=255)
                                                               acacTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATTTTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGcc                                       >  1:3177209/1‑101 (MQ=255)
                                                               acacTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGcc                                       <  1:2603083/101‑1 (MQ=255)
                                                               acacTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGcc                                       <  1:7677539/101‑1 (MQ=255)
                                                                   tttCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAgcg                                   <  1:3055472/101‑1 (MQ=255)
                                                                     tCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGcc                                 <  1:3268511/101‑1 (MQ=255)
                                                                     tCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGcc                                 <  1:13004648/101‑1 (MQ=255)
                                                                      cTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCg                                >  1:11743853/1‑101 (MQ=255)
                                                                      cTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCg                                <  1:8987979/101‑1 (MQ=255)
                                                                            acgacgTTCCAGCGCGGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCa                          >  1:1459248/1‑101 (MQ=255)
                                                                            acgacgTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCa                          <  1:8045658/101‑1 (MQ=255)
                                                                              gacgTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGc                        >  1:3724714/1‑101 (MQ=255)
                                                                               acgTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCa                       >  1:1288087/1‑101 (MQ=255)
                                                                                cgTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCAt                      >  1:1116059/1‑101 (MQ=255)
                                                                                cgTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCAt                      <  1:11791819/101‑1 (MQ=255)
                                                                                cgTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCAt                      <  1:9626190/101‑1 (MQ=255)
                                                                                   tCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGtt                   <  1:7149442/101‑1 (MQ=255)
                                                                                    ccAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGttt                  <  1:6529649/101‑1 (MQ=255)
                                                                                    ccAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGttt                  >  1:1253231/1‑101 (MQ=255)
                                                                                      aGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTcc                >  1:10908715/1‑101 (MQ=255)
                                                                                       gcgcAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCg               <  1:3446594/101‑1 (MQ=255)
                                                                                       gcgcAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCg               <  1:1055100/101‑1 (MQ=255)
                                                                                         gcagcaTCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGc             >  1:12233652/1‑101 (MQ=255)
                                                                                            gcaTCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGTc          >  1:11007860/1‑101 (MQ=255)
                                                                                                 tttttCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGTCCATTg     >  1:3328998/1‑101 (MQ=255)
                                                                                                  ttttCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGTCCATTgc    <  1:11453003/101‑1 (MQ=255)
                                                                                                    ttCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGTCCATTgcgc  <  1:464476/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
CGTAACGTTCTTTCAGGCCACGCAGAATCGCAATGGTATCTTCAACAGAAGGCTCGGCAACAAACACTTTCTGGAAACGACGTTCCAGCGCAGCATCTTTTTCAATGTACTGGCGATATTCGTCAAGCGTCGTGGCACCTACGCAGTGCAATTCACCACGCGCCAGCGCCGGTTTCAGCATGTTTCCGGCGTCCATTGCGC  >  NC_007779/2731758‑2731958

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.