| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,306,732 | A→G | 5.2% | S328S (TCT→TCC) | deaD ← | ATP‑dependent RNA helicase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,306,732 | 0 | A→G | 5.2% | 26.5 ‑2.4 ‑2.3 | 248 | S328S (TCT→TCC) | deaD | ATP‑dependent RNA helicase |
| Reads supporting (aligned to +/- strand): new base (10/3): ref base (123/112): total (133/115) | ||||||||||
| Fisher's exact test strand distribution p-value = 9.49e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.10e-03 | ||||||||||
Only 100 of 259 total aligned reads displayed.
GTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCAACGTCGGTCGCAATCAGGATGTCCAGAC > NC_007779/3306632‑3306832 | gTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTaa < 1:569982/101‑1 (MQ=255) cAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGAc > 1:5376163/1‑101 (MQ=255) aaTGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACt > 1:9577599/1‑101 (MQ=255) aTGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTc > 1:10053138/1‑101 (MQ=255) gTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAg > 1:14278902/1‑101 (MQ=255) tGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGaa > 1:4318791/1‑101 (MQ=255) cgcAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATc < 1:1474916/101‑1 (MQ=255) gcagcaGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATcc > 1:11557313/1‑101 (MQ=255) cagcagACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGTCCGATACGGTGAACGTAAGACTCAGAATCCa < 1:8845099/101‑1 (MQ=255) cagcagACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCa < 1:10581222/101‑1 (MQ=255) cagcagACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCa > 1:3965659/1‑101 (MQ=255) cagcagACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCa < 1:381668/101‑1 (MQ=255) cagcagACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCa > 1:10916989/1‑101 (MQ=255) cagACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCg > 1:1426203/1‑101 (MQ=255) agACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCgg < 1:3714719/101‑1 (MQ=255) acgacgCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGa < 1:10790694/101‑1 (MQ=255) cgacgCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGat < 1:11990900/101‑1 (MQ=255) gacgCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGata < 1:4467108/101‑1 (MQ=255) gacgCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGata > 1:7509291/1‑101 (MQ=255) cgCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATc < 1:6228317/101‑1 (MQ=255) cgCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACAGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATc < 1:8182063/101‑1 (MQ=255) gCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCg < 1:10241682/101‑1 (MQ=255) cTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCTGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGt > 1:11446130/1‑101 (MQ=255) cTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCTGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGt > 1:11689387/1‑101 (MQ=255) cgcgGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAg < 1:1713801/101‑1 (MQ=255) gcgGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGt > 1:1121116/1‑101 (MQ=255) ggTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTa > 1:2701930/1‑101 (MQ=255) ggTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTa < 1:6952300/101‑1 (MQ=255) ggTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTa < 1:1338944/101‑1 (MQ=255) ttCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAAc > 1:5047112/1‑101 (MQ=255) tcAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTAc < 1:3319717/101‑1 (MQ=255) cAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTAcc > 1:4775836/1‑101 (MQ=255) aaCGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCa < 1:8775010/101‑1 (MQ=255) cGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAgg < 1:1388104/101‑1 (MQ=255) cGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAgg < 1:1896792/101‑1 (MQ=255) gAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGc > 1:8714865/1‑101 (MQ=255) agcagcGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGAt < 1:9086679/101‑1 (MQ=255) cagcGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATAc > 1:1392719/1‑101 (MQ=255) cagcGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATAc < 1:1623114/101‑1 (MQ=255) agcGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACg < 1:6518869/101‑1 (MQ=255) agcGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACg > 1:4601044/1‑101 (MQ=255) agcGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACg < 1:1787288/101‑1 (MQ=255) gcgcgcGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGc > 1:10228849/1‑101 (MQ=255) ggCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACg < 1:11139907/101‑1 (MQ=255) ggCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACg > 1:758330/1‑101 (MQ=255) ggCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACg < 1:4544477/101‑1 (MQ=255) gCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGt < 1:811554/101‑1 (MQ=255) gCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGt < 1:6831830/101‑1 (MQ=255) cAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTcc > 1:3281502/1‑101 (MQ=255) cAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTcc > 1:12585403/1‑101 (MQ=255) aGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCa > 1:9441403/1‑101 (MQ=255) aGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCa > 1:4660726/1‑101 (MQ=255) aGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCa > 1:12450049/1‑101 (MQ=255) gCACGACCCGCACGACCGGTACGACCGATACGATGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAg < 1:5899311/101‑1 (MQ=255) aCGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGc > 1:2133126/1‑101 (MQ=255) cGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGcc < 1:13743570/101‑1 (MQ=255) gACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCa > 1:12162735/1‑101 (MQ=255) gACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCa > 1:2567269/1‑101 (MQ=255) gACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCa > 1:13203798/1‑101 (MQ=255) gcccGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCAc < 1:5187791/100‑1 (MQ=255) gccagcgcGACCGGTACGACCAATGCGGTGGACGTAGGACTCGGTGTCGTGCGGAATGTCGTAGTTGACCACGTGGGAAATGCGGTCAACGTCCAGGCCAc < 1:7780642/94‑1 (MQ=255) aCCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCAc < 1:9186476/101‑1 (MQ=255) aCCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCAc < 1:13281379/101‑1 (MQ=255) ccagcgcGACCGGTACGACCAATGCGGTGGACGTAGGACTCGGTGTCGTGCGGAATGTCGTAGTTGACCACGTGGGAAATGCGGTCAACGTCCAGGCCACg < 1:3577651/95‑1 (MQ=255) ccGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGTGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACgg < 1:13130277/101‑1 (MQ=255) cGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACggg > 1:12869866/1‑101 (MQ=255) cGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACggg > 1:1495650/1‑101 (MQ=255) gCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGc < 1:6320013/101‑1 (MQ=255) cgcGACCGGTACGACCAATGCGGTGGACGTAGGACTCGGTGTCGTGCGGAATGTCGTAGTTGACCACGTGGGAAATGCGGTCAACGTCCAGGCCACGAGca > 1:3111163/3‑100 (MQ=255) gcGACCGGTACGACCAATGCGGTGGACGTAGGACTCGGTGTCGTGCGGAATGTCGTAGTTGACCACGTGGGAAATGCGGTCAACGTCCAGGCCACGAGcag > 1:5800197/2‑99 (MQ=255) aCGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTg < 1:10700014/101‑1 (MQ=255) aCGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTg > 1:11616808/1‑101 (MQ=255) gACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCa > 1:6873734/1‑101 (MQ=255) gACCGGTACGACCAATGCGGTGGACGTAGGACTCGGTGTCGTGCGGAATGTCGTAGTTGACCACGTGGGAAATGCGGTCAACGTCCAGGCCACGAGCAGcc > 1:11330086/1‑100 (MQ=255) aCCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCac > 1:11952256/1‑100 (MQ=255) ccGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCAAc < 1:13761571/101‑1 (MQ=255) ggTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCAACgt < 1:847140/101‑1 (MQ=255) gTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCAACgtc < 1:14021337/101‑1 (MQ=255) aCGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCAACgtcgg > 1:3470098/1‑101 (MQ=255) cGACCAATGCGGTGGACGTAGGACTCGGTGTCGTGCGGAATGTCGTAGTTGACCACGTGGGAAATGCGGTCAACGTCCAGGCCACGAGCAGCCACatcggt > 1:4008974/1‑101 (MQ=255) gACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCAACgtcggtc < 1:8503629/101‑1 (MQ=255) aCCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCAACgtcggtcg < 1:7048624/101‑1 (MQ=255) ccaatgcGGTGGACGTAGGACTCGGTGTCGTGCGGAATGTCGTAGTTGACCACGTGGGAAATGCGGTCAACGTCCAGGCCACGAGCAGCCACGTCGGTTGc < 1:13704726/95‑1 (MQ=255) ccGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCAACGTCGGTCGc > 1:4947344/1‑101 (MQ=255) cGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCAACGTCGGTCGCa > 1:11637847/1‑101 (MQ=255) cGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCTAGGCCACGGGCTGCAACGTCGGTCGCAATCAg > 1:2289396/1‑101 (MQ=255) cGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCAACGTCGGTCGCAATCAg < 1:6116838/101‑1 (MQ=255) ggTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCAACGTCGGTCGCAATCAgg > 1:1103262/1‑101 (MQ=255) tGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCAACTTCGGTCGCAATCAGGAt > 1:10100277/1‑101 (MQ=255) tGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCAACGTCGGTCGCAATCAGGAt < 1:7958103/101‑1 (MQ=255) tGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCAACGTCGGTCGCAATCAGGAt < 1:3416859/101‑1 (MQ=255) gAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCAACGTCGGTCGCAATCAGGATg > 1:13457027/1‑101 (MQ=255) cGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCAACGTCGGTCGCAATCAGGATGTcc < 1:7720533/101‑1 (MQ=255) cGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCAACGTCGGTCGCAATCAGGATGTcc < 1:3003200/101‑1 (MQ=255) gTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCAACGTCGGTCGCAATCAGGATGTCCa < 1:2779/101‑1 (MQ=255) gTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCAACGTCGGTCGCAATCAGGATGTCCa > 1:2932311/1‑101 (MQ=255) tAAGACTCAGAATCCCTCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCAACGTCGGTCGCAATCAGGATGTCCAg < 1:9785455/101‑1 (MQ=255) tAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCAACGTCGGTCGCAATCAGGATGTCCAg < 1:1956798/101‑1 (MQ=255) aaGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCAACGTCGGTCGCAATCAGGATGTCCAga < 1:4198299/101‑1 (MQ=255) aGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCAACGTCGGTCGCAATCAGGATGTCCAgac < 1:7523844/101‑1 (MQ=255) | GTTCAATGTTGCGCAGCAGACGACGCTCGCGGTTCTCAACGAACAGCAGCGCGCGGCCAGCACGACCCGCACGACCGGTACGACCGATACGGTGAACGTAAGACTCAGAATCCATCGGGATATCGTAGTTAACTACCAGGCTGATACGCTCAACGTCCAGGCCACGGGCTGCAACGTCGGTCGCAATCAGGATGTCCAGAC > NC_007779/3306632‑3306832 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |