| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,326,092 | A→G | 8.6% | V233V (GTT→GTC) | ftsH ← | protease, ATP‑dependent zinc‑metallo |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,326,092 | 0 | A→G | 8.6% | 54.2 ‑1.3 ‑0.0 | 269 | V233V (GTT→GTC) | ftsH | protease, ATP‑dependent zinc‑metallo |
| Reads supporting (aligned to +/- strand): new base (9/14): ref base (129/116): total (138/131) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.76e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.04e-01 | ||||||||||
Only 100 of 280 total aligned reads displayed.
CACCGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTTTCGCTTCGCCTGCAATCGCTTTCGCCAGC > NC_007779/3325992‑3326191 | caccGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACCGGGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGa > 1:9518960/1‑101 (MQ=255) accGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGaa < 1:10375480/101‑1 (MQ=255) ccAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACgg < 1:12850489/101‑1 (MQ=255) ccAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACgg > 1:11576038/1‑101 (MQ=255) aGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGa > 1:14134533/1‑101 (MQ=255) aGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGa < 1:12886154/101‑1 (MQ=255) gACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGAt < 1:2806021/101‑1 (MQ=255) ccAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGc > 1:223675/1‑101 (MQ=255) cAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCa < 1:976039/101‑1 (MQ=255) cAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCa > 1:8147947/1‑101 (MQ=255) cAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCa > 1:8075892/1‑101 (MQ=255) aGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCAc > 1:10376938/1‑101 (MQ=255) aGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCAc > 1:7146809/1‑101 (MQ=255) cgcCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCAccc < 1:7312993/101‑1 (MQ=255) cgcCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCAccc < 1:13643527/101‑1 (MQ=255) ccACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCcac < 1:4876268/101‑1 (MQ=255) ccACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCcac < 1:10032269/101‑1 (MQ=255) cACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCcaca > 1:11673391/1‑101 (MQ=255) cACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCcaca > 1:3775156/1‑101 (MQ=255) aCGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCacac > 1:505485/1‑101 (MQ=255) gCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACcg < 1:13922395/101‑1 (MQ=255) gCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACcg < 1:13485595/101‑1 (MQ=255) cTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACcga < 1:11849932/101‑1 (MQ=255) cTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACcga > 1:13328187/1‑101 (MQ=255) tGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACcgac < 1:14309633/101‑1 (MQ=255) ggcggcCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAGCATGTCACGAACACGGGATGCACCCACACcgacg > 1:13099385/1‑101 (MQ=255) cggcCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGaa < 1:7997373/101‑1 (MQ=255) cggcCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGaa < 1:6192026/101‑1 (MQ=255) cGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCt < 1:4395246/101‑1 (MQ=255) cGGCGTCAATCTCGTCGATGAAGATAATGCACGG‑GCTGTTTTCCTTGGCCTGATTAAACAAGTCACGGACACGAGAGGCTCCGACACCGACGAACATTTcg > 1:9845614/1‑100 (MQ=255) ggCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTa < 1:11562548/101‑1 (MQ=255) gTCAATCTCGTCGATGAAGATAATGCACGG‑GCTGTTTTCCTTGGCCTGATTAAACAAGTCACGGACACGAGAGGCACCGACACCGACGAACATTTCGACGa > 1:12015498/1‑101 (MQ=255) gTCAATCTCGTCGATGAAGATAATGCACGG‑GCTGTTTTCCTTGGCCTGATTAAACAAGTCACGGACACGAGAGGCACCGACACCGACGAACATTTCGACGa < 1:11604799/101‑1 (MQ=255) gTCAATCTCGTCGATGAAGATAATGCACGG‑GCTGTTTTCCTTGGCCTGATTAAACAAGTCACGGACACGAGAGGCACCGACACCGACGAACATTTCGACGa > 1:1503468/1‑101 (MQ=255) tcaatctcgtCGATGAAGATAATGCACGG‑GCTGTTTTCCTTGGCCTGATTAAACAAGTCACGGACACGAGAGGCACCGACACCGACGAACATTTCGACGaa < 1:195414/92‑1 (MQ=255) tCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGaa < 1:3242331/101‑1 (MQ=255) cGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAg < 1:10861826/101‑1 (MQ=255) gATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGt > 1:5266218/1‑101 (MQ=255) atctcgtCGATGAAGATAATGCACGG‑GCTGTTTTCCTTGGCCTGATTAAACAAGTCACGGACACGAGAGGCACCGACACCGACGAACATTTCGACGAAGTc < 1:5215341/95‑1 (MQ=255) atctcgtCGATGAAGATAATGCACGG‑GCTGTTTTCCTTGGCCTGATTAAACAAGTCACGGACACGAGAGGCACCGACACCGACGAACATTTCGACGAAGTc < 1:10298160/95‑1 (MQ=255) tttCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCa > 1:6553487/1‑101 (MQ=255) tttCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCa > 1:2253085/1‑101 (MQ=255) ttCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAg > 1:4105327/1‑101 (MQ=255) ttCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAg > 1:10873959/1‑101 (MQ=255) ttCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAg < 1:13807520/101‑1 (MQ=255) tCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGa > 1:8367208/1‑101 (MQ=255) tCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAAcc < 1:8449638/101‑1 (MQ=255) gATGAAGATAATGCACGG‑GCTGTTTTCCTTGGCCTGATTAAACAAGTCACGGACACGAGAGGCACCGACACCGACGAACATTTCGACGAAGTCCGAAcccg > 1:6812979/1‑99 (MQ=255) gATGAAGATAATGCACGG‑GCTGTTTTCCTTGGCCTGATTAAACAAGTCACGGACACGAGAGGCACCGACACCGACGAACATTTCGACGAAGTCCGAAcccg < 1:6728535/101‑3 (MQ=255) gATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCgg > 1:5328520/1‑101 (MQ=255) aTAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGga > 1:10063475/1‑101 (MQ=255) tgaaGATAATGCACGG‑GCTGTTTTCCTTGGCCTGATTAAACAAGTCACGGACACGAGAGGCACCGACACCGACGAACATTTCGACGAAGTCCGAACCCgag < 1:2022170/99‑1 (MQ=255) aaGATAATGCACGG‑GCTGTTTTCCTTGGCCTGATTAAACAAGTCACGGACACGAGAGGCACCGACACCGACGAACATTTCGACGAAGTCCGAACCCGAGAt < 1:1248837/101‑1 (MQ=255) gataatGCACGG‑GCTGTTTTCCTTGGCCTGATTAAACAAGTCACGGACACGAGAGGCACCGACACCGACGAACATTTCGACGAAGTCCGAACCCGAGAtgg < 1:5924906/101‑3 (MQ=255) ataatgCACGG‑GCTGTTTTCCTTGGCCTGATTAAACAAGTAACGGACACGAGAGGCACTGACACCGACGAACATTTCGACGAAGCCACAACCCgagacggt > 1:8795921/4‑97 (MQ=255) tgatgCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTa > 1:737980/1‑101 (MQ=255) tgatgCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTa > 1:4553777/1‑101 (MQ=255) tgatgCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTa > 1:2571776/1‑101 (MQ=255) tgatgCACGGTGCCGCTTT‑CTTCGCCTGTGCGAACAGGTCACGAACACGGGATGCACCCACACCGTCGAACATGTCTACGAAGTCAGAACCGGAGATAgaa < 1:7754915/101‑3 (MQ=255) gatgCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTaa < 1:10187883/101‑1 (MQ=255) atgCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTaaa > 1:9411716/1‑101 (MQ=255) atgCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTaaa < 1:12975584/101‑1 (MQ=255) atgCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTaaa < 1:10652706/101‑1 (MQ=255) atgCACGG‑GCTGTTTTCCTTGGCCTGATTAAACAAGTCACGGACACGAGAGGCACCGACACCGACGAACATTTCGACGAAGTCCGAACCCGAGAtggcgta < 1:2962477/101‑7 (MQ=255) tgCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAg > 1:12564343/1‑101 (MQ=255) tgCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAg > 1:2752944/1‑101 (MQ=255) cACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGaa < 1:5511404/101‑1 (MQ=255) cACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGaa > 1:6969373/1‑101 (MQ=255) aCGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAAc > 1:3876213/1‑101 (MQ=255) cGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACg > 1:6498973/1‑101 (MQ=255) ggTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACgg > 1:11210377/1‑101 (MQ=255) ggTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACgg > 1:11988310/1‑101 (MQ=255) gTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGa < 1:6348904/101‑1 (MQ=255) tGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGaa > 1:3559758/1‑101 (MQ=255) gCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAAc > 1:7909958/1‑101 (MQ=255) gCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAAc < 1:2883250/101‑1 (MQ=255) ctgttttccttgGCCTGATTAAACAAGTCACGGACACGAGAGGCACCGACACCGACGAACATTTCGACGAAGTCCGAACCCGAGATGGCGTAGAAAGGAAc > 1:10798674/9‑101 (MQ=255) gCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACttt < 1:1136136/101‑1 (MQ=255) gCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACttt > 1:6153034/1‑101 (MQ=255) cTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTttc > 1:5389038/1‑101 (MQ=255) ttt‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTttcg < 1:12335534/101‑1 (MQ=255) ttt‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTttcg > 1:6913122/1‑101 (MQ=255) t‑cttcGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTttcgct < 1:1831874/101‑1 (MQ=255) cttcGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTttcgctt < 1:12719363/101‑1 (MQ=255) cttcGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTttcgctt > 1:12075482/1‑101 (MQ=255) cGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTttcgcttcgc < 1:9927672/101‑1 (MQ=255) cGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTttcgcttcgc < 1:6115646/101‑1 (MQ=255) cGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTttcgcttcgc > 1:5771395/1‑101 (MQ=255) tCGAACATGTCACGAACCCGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTTTCGCTTCGCCTGCAAt < 1:10105467/101‑1 (MQ=255) cGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTTTCGCTTCGCCTGCAATc > 1:7717046/1‑101 (MQ=255) cGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTTTCGCTTCGCCTGCAATc < 1:9489172/101‑1 (MQ=255) gAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTTTCGCTTCGCCTGCAATCg < 1:13353747/101‑1 (MQ=255) cATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTTTCGCTTCGCCTGCAATCGCtt > 1:1262963/1‑101 (MQ=255) cATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTTTCGCTTCGCCTGCAATCGCtt < 1:5733666/101‑1 (MQ=255) aTGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTTTCGCTTCGCCTGCAATCGCttt > 1:3138978/1‑101 (MQ=255) tGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTTTCGCTTCGCCTGCAATCGCTTTc < 1:11031879/101‑1 (MQ=255) tGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGAAGATAGTAAAGAACGGAACTTTCGCTTCGCCTGCAATCGCTTTc < 1:2473342/101‑1 (MQ=255) gTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTTTCGCTTCGCCTGCAATCGCTTTCg < 1:10456440/101‑1 (MQ=255) tCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTTTCGCTTCGCCTGCAATCGCTTTCGc < 1:12797968/101‑1 (MQ=255) gAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTTTCGCTTCGCCTGCAATCGCTTTCGCcagc > 1:4197312/1‑101 (MQ=255) | CACCGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTTTCGCTTCGCCTGCAATCGCTTTCGCCAGC > NC_007779/3325992‑3326191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |