| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,441,358 | C→G | 11.8% | S259S (TCC→TCG) | thiC → | thiamin (pyrimidine moiety) biosynthesis protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,441,358 | 0 | C→G | 11.8% | 98.1 ‑1.0 ‑1.2 | 288 | S259S (TCC→TCG) | thiC | thiamin (pyrimidine moiety) biosynthesis protein |
| Reads supporting (aligned to +/- strand): new base (20/14): ref base (126/128): total (146/142) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.63e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.93e-02 | ||||||||||
Only 100 of 293 total aligned reads displayed.
TGATTATTGGTCGCAATTTCCTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGTGGATTTTGCGTAACAGCCCGGTGCCGATCGGTA > NC_007779/3441258‑3441458 | tgatTATTGGTCGCAATTTCCTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTcc < 1:1186817/101‑1 (MQ=255)tgatTATTGGTCGCAATTTCCTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTcc < 1:11198968/101‑1 (MQ=255) gatTATTGGTCGCAATTTCCTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCa > 1:356302/1‑101 (MQ=255) attattGGTCGCAATTTCCTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCAc > 1:3886809/1‑101 (MQ=255) ttattGGTCGCAATTTCCTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCAcg > 1:9973128/1‑101 (MQ=255) ttattGGTCGCAATTTCCTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCAcg < 1:7116203/101‑1 (MQ=255) ttattGGTCGCAATTTCCTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCAcg < 1:9057347/101‑1 (MQ=255) tattGGTCGCAATTTCCTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGGAGAAGTGGAAAAGCTGGTATGGTCCAcgc < 1:336707/101‑1 (MQ=255) attGGTCGCAATTTCCTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCAcgcg < 1:4324274/101‑1 (MQ=255) ggTCGCAATTTCCTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTg > 1:12807015/1‑101 (MQ=255) gTCGCAATTTCCTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTgg < 1:6607053/101‑1 (MQ=255) cGCAATTTCCTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTgggg > 1:12164271/1‑101 (MQ=255) cAATTTCCTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAg > 1:11286503/1‑101 (MQ=255) aaTTTCCTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGc < 1:2130133/101‑1 (MQ=255) aTTTCCTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCg < 1:833712/101‑1 (MQ=255) tttCCTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCgg < 1:7312497/101‑1 (MQ=255) ttCCTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGa > 1:4191742/1‑101 (MQ=255) ttCCTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGa < 1:469535/101‑1 (MQ=255) ttCCTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGa > 1:8732792/1‑101 (MQ=255) cTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATAc < 1:4584514/101‑1 (MQ=255) tGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACg > 1:9820763/1‑101 (MQ=255) ggTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATCCgg > 1:8577065/1‑101 (MQ=255) ggTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACgg > 1:9650010/1‑101 (MQ=255) gTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGt > 1:12693232/1‑101 (MQ=255) gTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGt < 1:494457/101‑1 (MQ=255) aaaaGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGa < 1:6956263/101‑1 (MQ=255) aaaGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGAt > 1:11972456/1‑101 (MQ=255) aaaGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGAt < 1:7026674/101‑1 (MQ=255) aaaGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGAt > 1:3114969/1‑101 (MQ=255) aaaGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGAt > 1:9192328/1‑101 (MQ=255) aGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGCGCGGATACGGTGATgg < 1:9591147/101‑1 (MQ=255) ttAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGAt > 1:2730682/1‑101 (MQ=255) ttAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGAt < 1:8821340/101‑1 (MQ=255) tAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGAtc < 1:3148032/101‑1 (MQ=255) tAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGAtc > 1:11017455/1‑101 (MQ=255) aaCGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGAtct < 1:7606978/101‑1 (MQ=255) aaCGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGAtct > 1:10455123/1‑101 (MQ=255) cGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGAtctct > 1:5483074/1‑101 (MQ=255) ccAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTcc > 1:4482548/1‑101 (MQ=255) cAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCa < 1:10142593/101‑1 (MQ=255) cAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCa > 1:9433634/1‑101 (MQ=255) cAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCa > 1:9241194/1‑101 (MQ=255) cAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCa > 1:7855138/1‑101 (MQ=255) cAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCa < 1:6901879/101‑1 (MQ=255) aaTATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCAc < 1:12459816/101‑1 (MQ=255) atatCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCAcc < 1:1419811/101‑1 (MQ=255) atCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCgg > 1:13476074/1‑101 (MQ=255) atCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCgg < 1:13347408/101‑1 (MQ=255) ggCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCg < 1:899729/101‑1 (MQ=255) gCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGGTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGc > 1:12101124/1‑101 (MQ=255) cAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCt < 1:2803231/101‑1 (MQ=255) aaCTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCta > 1:684274/1‑101 (MQ=255) cTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCtata > 1:6666469/1‑101 (MQ=255) cTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCtata < 1:4638899/101‑1 (MQ=255) cTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCtata < 1:7537819/101‑1 (MQ=255) cTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCtata < 1:1685407/101‑1 (MQ=255) ggcggTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTc < 1:5012446/101‑1 (MQ=255) gcggTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCa > 1:11450826/1‑101 (MQ=255) gcggTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCa < 1:8584691/101‑1 (MQ=255) cggTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCAc > 1:6246397/1‑101 (MQ=255) ggTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACg > 1:10808927/1‑101 (MQ=255) gTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCtagtgctgaag < 1:4140997/101‑10 (MQ=255) ccTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAAcc < 1:8897901/101‑1 (MQ=255) ctctTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAAccc < 1:8001414/101‑1 (MQ=255) ttCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCcgcg > 1:6169851/1‑101 (MQ=255) tCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGa < 1:10877885/101‑1 (MQ=255) tCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGa < 1:7726155/101‑1 (MQ=255) tCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTACACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGa < 1:1811766/101‑1 (MQ=255) ccatctccgaagaggTGGAGAAGATGGTGTGGGCGTCCCGTTGGGGCGCGGACACCATCATGGACCTGTCCACCGGTAAGGACATTCACGAAACCCGCGAg > 1:6557451/9‑101 (MQ=255) ccATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAg < 1:7266565/101‑1 (MQ=255) catctccgaagaggTGGAGAAGATGGTGTGGGCGACCCGTTGGGGCGCGGACACCATCATGGACCTGTCCACCGGTAAGGACATTCACGAAACCCGCGAgg > 1:13738428/8‑100 (MQ=255) cATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGt < 1:1528781/101‑1 (MQ=255) cATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGt < 1:13679159/101‑1 (MQ=255) tCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGTgg < 1:10394644/101‑1 (MQ=255) ctccgaagaggTGGAGAAGATGGTGTGGGCGACCCGTTGGGGCGCGGACACCATCATGGACCTGTCCACCGGTAAGGACATTCACGAAACCCGCGAGTGGa > 1:10765358/5‑101 (MQ=255) aagaagaagTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGTGGAtt > 1:12882687/1‑101 (MQ=255) aagaagaagTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGTGGAtt > 1:3586474/1‑101 (MQ=255) aagaagaagTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGTGGAtt > 1:3812737/1‑101 (MQ=255) aagaagaagTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGTGGAtt > 1:13769789/1‑101 (MQ=255) aagaagaagTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGTGGAtt < 1:11754605/101‑1 (MQ=255) agaagaagTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGTGGAttt < 1:950784/101‑1 (MQ=255) gaagaggTGGAGAAGATGGTGTGGGCGACCCGTTGGGGCGCGGACACCATCATGGACCTGTCCACCGGTAAGGACATTCACGAAACCCGCGAGTGGAttct > 1:5367111/1‑99 (MQ=255) agaggTGGAGAAGATGGTGTGGGCGACCCGTTGGGGCGCGGACACCATCATGGACCTGTCCACCGGTAAGGACATTCACGAAACCCGCGAGTGGATTCTGc > 1:161751/1‑101 (MQ=255) agaggTGGAGAAGATGGTGTGGGCGACCCGTTGGGGCGCGGACACCATCATGGACCTGTCCACCGGTAAGGACATTCACGAAACCCGCGAGTGGATTCTGc > 1:5242561/1‑101 (MQ=255) agaagTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGTGGATTTTGc > 1:12550274/1‑101 (MQ=255) agaagTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGTGGATTTTGc < 1:5127505/101‑1 (MQ=255) gaggTGGAGAAGATGGTGTGGGCGACCCGTTGGGGCGCGGACACCATCATGGACCTGTCCACCGGTAAGGACATTCACGAAACCCGCGAGTGGATTCTGCg > 1:2434578/4‑101 (MQ=255) ggTGGAGAAGATGGTGTGGGCGACCCGTTGGGGCGCGGACACCATCATGGACCTGTCCACCGGTAAGGACATTCACGAAACCCGCGAGTGGATTCTGCGTa > 1:1998057/2‑101 (MQ=255) ggTGGAGAAGATGGTGTGGGCGACCCGTTGGGGCGCGGACACCATCATGGACCTGTCCACCGGTAAGGACATTCACGAAACCCGCGAGTGGATTCTGCGTa < 1:4356787/100‑1 (MQ=255) ggAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGTGGATTTTGCGTAACa < 1:3766939/101‑1 (MQ=255) ggAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGTGGATTTTGCGTAACa < 1:10668443/101‑1 (MQ=255) aaaaGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGTGGATTTTGCGTAACAGc > 1:10003788/1‑101 (MQ=255) agatGGTGTGGGCGACCCGTTGGGGCGCGGACACCATCATGGACCTGTCCACCGGTAAGGACATTCACGAAACCCGCGAGTGGATTCTGCGTAACTCCCCg < 1:13064131/98‑1 (MQ=255) aGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGTGGATTTTGCGTAACAGCCCg > 1:5979394/1‑101 (MQ=255) ggTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGTGGATTTTGCGTAACAGACCGGTGc > 1:5778246/1‑101 (MQ=255) ggTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGATCGCTATATTCACGAAACCCGCGAGTGGATTTTGCGTAACAGCCCGGTGc < 1:10294207/101‑1 (MQ=255) tATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGTGGATTTTGCGTAACAGCCCGGTGCCg > 1:8097868/1‑101 (MQ=255) tATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGTGGATTTTGCGTAACAGCCCGGTGCCg > 1:1408884/1‑101 (MQ=255) aTGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGTGGATTTTGCGTAACAGCCCGGTGCCGa > 1:12334138/1‑101 (MQ=255) tCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGTGGATTTTGCGTAACAGCCCGGTGCCGATCgg < 1:2528705/101‑1 (MQ=255) | TGATTATTGGTCGCAATTTCCTGGTAAAAGTTAACGCCAATATCGGCAACTCGGCGGTCACCTCTTCCATCGAAGAAGAAGTGGAAAAGCTGGTATGGTCCACGCGCTGGGGAGCGGATACGGTGATGGATCTCTCCACCGGTCGCTATATTCACGAAACCCGCGAGTGGATTTTGCGTAACAGCCCGGTGCCGATCGGTA > NC_007779/3441258‑3441458 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |