| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,442,162 | G→A | 3.2% | A527A (GCG→GCA) | thiC → | thiamin (pyrimidine moiety) biosynthesis protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,442,162 | 0 | G→A | 3.2% | 10.1 ‑0.3 ‑0.1 | 248 | A527A (GCG→GCA) | thiC | thiamin (pyrimidine moiety) biosynthesis protein |
| Reads supporting (aligned to +/- strand): new base (4/4): ref base (134/106): total (138/110) | ||||||||||
| Fisher's exact test strand distribution p-value = 7.36e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.59e-01 | ||||||||||
Only 100 of 254 total aligned reads displayed.
GTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTA > NC_007779/3442062‑3442262 | tACGTCACGCCGAAGGAGCACCTGGGTCTGCCGAACCGCGACGACGTCAAGGTCGGCGTGATTACTTACAAGATTTCCGCGCACGCCGCTGACCTGGCAaa < 1:1674817/101‑1 (MQ=255) aCGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGaaa > 1:4648604/1‑101 (MQ=255) aCGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGaaa > 1:10826450/1‑101 (MQ=255) gTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAgg < 1:11685491/101‑1 (MQ=255) gTAACGACAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAGAgg > 1:10126802/1‑101 (MQ=255) aCGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCa > 1:6846032/1‑101 (MQ=255) cGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCAt > 1:5564053/1‑101 (MQ=255) gCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATc < 1:588818/101‑1 (MQ=255) ccAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATcc > 1:4277824/1‑101 (MQ=255) ccAAAAAAGCATCTGGGTCTGCCCAATAAAGAGGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATcc < 1:6512740/101‑1 (MQ=255) cAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCg > 1:10290999/1‑101 (MQ=255) aaaaGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCgg > 1:2825491/1‑101 (MQ=255) aaaaGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCgg > 1:7185527/1‑101 (MQ=255) aaaGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCggg > 1:11110333/1‑101 (MQ=255) aTCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCaa < 1:11046470/101‑1 (MQ=255) aTCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCaa > 1:2154157/1‑101 (MQ=255) tCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCaaa > 1:3385721/1‑101 (MQ=255) tGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAAtt > 1:11636059/1‑101 (MQ=255) tGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAAtt > 1:4167493/1‑101 (MQ=255) gggTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTc < 1:6251524/101‑1 (MQ=255) gggTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTc > 1:3797599/1‑101 (MQ=255) ggTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTcg < 1:14079175/101‑1 (MQ=255) ggTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTcg > 1:583331/1‑101 (MQ=255) gTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTcgc > 1:8532523/1‑101 (MQ=255) gTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTcgc > 1:10747550/1‑101 (MQ=255) tCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTcgcg < 1:10947597/101‑1 (MQ=255) tCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTcgcg < 1:13494253/101‑1 (MQ=255) cTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGa > 1:3486663/1‑101 (MQ=255) tGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGAt > 1:10335858/1‑101 (MQ=255) tGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGAt < 1:4778613/101‑1 (MQ=255) gCCCAATAAAGAAGATGTTAAGCAGGGTCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATa < 1:10416607/101‑1 (MQ=255) gCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATa < 1:1879455/101‑1 (MQ=255) ccAGTAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAAc > 1:7091558/1‑101 (MQ=255) ccAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAAc < 1:7016365/101‑1 (MQ=255) ccAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAAc < 1:14202820/101‑1 (MQ=255) ccAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAAc < 1:12898538/101‑1 (MQ=255) ccAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAAc > 1:259856/1‑101 (MQ=255) ccAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAAc < 1:7469543/101‑1 (MQ=255) aTAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGcc < 1:2358333/101‑1 (MQ=255) aaaGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCAt > 1:5703091/1‑101 (MQ=255) aagaagATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATg < 1:12733071/101‑1 (MQ=255) aagaagATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATg > 1:7594628/1‑101 (MQ=255) gaagaTGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCTCGCAAATTCGCGATAACGCCATGTc < 1:10313891/101‑1 (MQ=255) gaagaTGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTc < 1:13059540/101‑1 (MQ=255) aagaTGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCg > 1:12484459/1‑101 (MQ=255) aTGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGTTAACGCCATGTCGaaa < 1:11977002/101‑1 (MQ=255) aTGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGaaa > 1:13932359/1‑101 (MQ=255) tGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAg < 1:7353705/101‑1 (MQ=255) gTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGc > 1:12694015/1‑101 (MQ=255) gTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGc < 1:5152132/101‑1 (MQ=255) ttAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGcc > 1:2446728/1‑101 (MQ=255) tAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGccc < 1:1986904/101‑1 (MQ=255) aaGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCg > 1:3425706/1‑101 (MQ=255) aaGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCg > 1:669250/1‑101 (MQ=255) aaGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCg < 1:5329941/101‑1 (MQ=255) aGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGc > 1:13362849/1‑101 (MQ=255) cAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCtt < 1:5518294/101‑1 (MQ=255) cAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCtt < 1:4398292/101‑1 (MQ=255) aGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTc > 1:12472893/1‑101 (MQ=255) ggggCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCg < 1:3051424/101‑1 (MQ=255) ggCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGaa > 1:10003153/1‑101 (MQ=255) ttATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAAttt > 1:6286806/1‑101 (MQ=255) ttATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAAttt > 1:4007534/1‑101 (MQ=255) tATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTc < 1:11482295/101‑1 (MQ=255) aTCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCg < 1:140047/101‑1 (MQ=255) cACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCt < 1:11832511/101‑1 (MQ=255) cACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCt > 1:6545363/1‑101 (MQ=255) cACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCt > 1:4216621/1‑101 (MQ=255) aCCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTg > 1:452086/1‑101 (MQ=255) ataAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGaa < 1:8325302/101‑1 (MQ=255) ataAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGaa < 1:12147646/101‑1 (MQ=255) ataAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGaa < 1:5062547/101‑1 (MQ=255) acaaGATTTCCGCGCACGCCGCTGACCTGGCAAAGGGGCTGCCGCGCGCTCAGGAGCGTGACGACGCGCTGTCGAAGGCCCGTTTCGAGTTCCGTTggcat < 1:6073106/99‑4 (MQ=255) taAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAg > 1:6109699/1‑101 (MQ=255) taAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAg < 1:3906213/101‑1 (MQ=255) aaGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGa < 1:8989365/101‑1 (MQ=255) aaGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGa > 1:8706424/1‑101 (MQ=255) aTTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCa < 1:9162808/101‑1 (MQ=255) ttGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAg > 1:4049624/1‑101 (MQ=255) tgctgcCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGt > 1:1778934/1‑101 (MQ=255) tgcCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTa > 1:3302822/1‑101 (MQ=255) gcCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTaa > 1:2691683/1‑101 (MQ=255) cccACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAAt > 1:13862745/1‑101 (MQ=255) gcACGCCGCTGACCTGGCAAAGGGGCTGCCGCGCGCTCAGGAGCGTGACGACGCGCTGTCGAAGGCCCGTTTCGAGTTCCGTTGGCATGACCAGtttgcac < 1:2283231/100‑5 (MQ=255) aCGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTg < 1:9817250/101‑1 (MQ=255) aCGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCCCTGGGAAGACCAGTTTAATCTg < 1:11213037/101‑1 (MQ=255) gccgcTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGc > 1:7294018/1‑101 (MQ=255) gccgcTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGc > 1:12249535/1‑101 (MQ=255) ccgcTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGcc > 1:5766340/1‑101 (MQ=255) gcTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCt < 1:6636535/101‑1 (MQ=255) cTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTc < 1:890799/101‑1 (MQ=255) cTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTc < 1:10486459/101‑1 (MQ=255) tGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCg < 1:7927713/101‑1 (MQ=255) tGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCg > 1:8164303/1‑101 (MQ=255) tGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCg > 1:9338/1‑101 (MQ=255) tGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCg > 1:9506926/1‑101 (MQ=255) ccTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGAcc < 1:9229894/101‑1 (MQ=255) cTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGAccc < 1:6326844/101‑1 (MQ=255) tGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCg > 1:3729348/1‑101 (MQ=255) tGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCg < 1:10562109/101‑1 (MQ=255) | GTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTA > NC_007779/3442062‑3442262 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |