| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,442,180 | G→T | 3.5% | A533A (GCG→GCT) | thiC → | thiamin (pyrimidine moiety) biosynthesis protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,442,180 | 0 | G→T | 3.5% | 12.0 0.0 ‑0.0 | 230 | A533A (GCG→GCT) | thiC | thiamin (pyrimidine moiety) biosynthesis protein |
| Reads supporting (aligned to +/- strand): new base (5/3): ref base (124/98): total (129/101) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.23e-01 | ||||||||||
Only 100 of 249 total aligned reads displayed.
AGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTATCACG > NC_007779/3442080‑3442280 | agCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGACATCCGGgcgcg > 1:7780445/1‑101 (MQ=255) gCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGgcgcgc > 1:10801827/1‑101 (MQ=255) aTCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCaa > 1:12798781/1‑101 (MQ=255) aTCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCaa < 1:11084405/101‑1 (MQ=255) tCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCaaa > 1:3385721/1‑101 (MQ=255) tGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAAtt > 1:4167493/1‑101 (MQ=255) gggTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTc < 1:534607/101‑1 (MQ=255) gTCTGCCGAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTcgc < 1:12079753/101‑1 (MQ=255) gTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTcgc < 1:11163865/101‑1 (MQ=255) tCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTcgcg < 1:10947597/101‑1 (MQ=255) tCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTcgcg > 1:6545153/1‑101 (MQ=255) tCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTcgcg > 1:6078037/1‑101 (MQ=255) tCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTcgcg < 1:13494253/101‑1 (MQ=255) cTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGa > 1:3486663/1‑101 (MQ=255) cTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGa < 1:11633996/101‑1 (MQ=255) tGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGAt > 1:9001605/1‑101 (MQ=255) gCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATa > 1:6590435/1‑101 (MQ=255) gCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATa > 1:13966219/1‑101 (MQ=255) ccAGTAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAAc > 1:7091558/1‑101 (MQ=255) ccAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAAc < 1:7023963/101‑1 (MQ=255) ccAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAAc > 1:2449433/1‑101 (MQ=255) ccAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAAc < 1:12898538/101‑1 (MQ=255) cAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACg > 1:9782484/1‑101 (MQ=255) aTAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGcc < 1:2358333/101‑1 (MQ=255) tAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCa > 1:4281909/1‑101 (MQ=255) aaaGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCAt > 1:5703091/1‑101 (MQ=255) aaaGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCAt < 1:11241613/101‑1 (MQ=255) aagaagATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATg < 1:4669787/101‑1 (MQ=255) aagaagATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATg < 1:12733071/101‑1 (MQ=255) aagaagATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATg > 1:13917747/1‑101 (MQ=255) aagaagATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATg > 1:7594628/1‑101 (MQ=255) agaagaTGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGt < 1:11028212/101‑1 (MQ=255) gaagaTGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTc < 1:13059540/101‑1 (MQ=255) aagaTGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCg > 1:12484459/1‑101 (MQ=255) aagaTGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCg < 1:8046296/101‑1 (MQ=255) agaTGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGa < 1:12310467/101‑1 (MQ=255) agaTGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGa > 1:11645944/1‑101 (MQ=255) aTGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGaaa > 1:9832794/1‑101 (MQ=255) aTGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGaaa > 1:1816768/1‑101 (MQ=255) gTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGc < 1:5152132/101‑1 (MQ=255) ttAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGcc > 1:624766/1‑101 (MQ=255) aaGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCg > 1:669250/1‑101 (MQ=255) aGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGc > 1:13362849/1‑101 (MQ=255) cAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCtt < 1:4398292/101‑1 (MQ=255) aGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTc < 1:10327064/101‑1 (MQ=255) aGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTc > 1:6263907/1‑101 (MQ=255) ggCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGaa > 1:10003153/1‑101 (MQ=255) gCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAAt > 1:4868446/1‑101 (MQ=255) cTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAAtt > 1:3431275/1‑101 (MQ=255) tATCACCTATAAGATTGCTGCCCACTCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTc > 1:10309996/1‑101 (MQ=255) tATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTc < 1:10642962/101‑1 (MQ=255) tATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTc < 1:375982/101‑1 (MQ=255) cACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCt < 1:11832511/101‑1 (MQ=255) ccTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTgg < 1:8756154/101‑1 (MQ=255) ataAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGaa < 1:8325302/101‑1 (MQ=255) ataAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGaa < 1:12147646/101‑1 (MQ=255) ataAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGaa < 1:10132710/101‑1 (MQ=255) ataAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGaa < 1:5062547/101‑1 (MQ=255) taAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAg < 1:3906213/101‑1 (MQ=255) caaGATTTCCGCGCACGCCGCTGACCTGGCAAAGGGGCTGCCGCGCGCTCAGGAGCGTGACGACGCGCTGTCGAAGGCCCGTTTCGAGTTCCGTTggcatg > 1:10463379/2‑97 (MQ=255) aaGATTTCCGCGCACGCCGCTGACCTGGCAAAGGGGCTGCCGCGCGCTCAGGAGCGTGACGACGCGCTGTCGAAGGCCCGTTTCGAGTTCCGTTggcatga > 1:5872673/1‑96 (MQ=255) aaGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGa > 1:5932530/1‑101 (MQ=255) aTTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCa < 1:3071458/101‑1 (MQ=255) tttccgcgcACGCCGCTGACCTGGCAAAGGGGCTGCCGCGCGCTCAGGAGCGTGACGACGCGCTGTCGAAGGCCCGTTTCGAGTTCCGTTGGCATGACCAg < 1:9185394/93‑1 (MQ=255) ttGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAg < 1:3810126/101‑1 (MQ=255) ttGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAg < 1:10541257/101‑1 (MQ=255) ccgcgcACGCCGCTGACCTGGCAAAGGGGCTGCCGCGCGCTCAGGAGCGTGACGACGCGCTGTCGAAGGCCCGTTTCGAGTTCCGTTGGCATGACCAGttt > 1:6300775/6‑101 (MQ=255) tgcCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTa > 1:6793547/1‑101 (MQ=255) tgcCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTa > 1:3543179/1‑101 (MQ=255) gcCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTaa > 1:2691683/1‑101 (MQ=255) cccACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAAt > 1:7424086/1‑101 (MQ=255) gccgcTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGc > 1:1933906/1‑101 (MQ=255) gccgcTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGc > 1:7294018/1‑101 (MQ=255) gccgcTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGc > 1:4192133/1‑101 (MQ=255) gccgcTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGc > 1:4019823/1‑101 (MQ=255) cgcTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGccc > 1:1428003/1‑101 (MQ=255) cgcTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGccc > 1:14071162/1‑101 (MQ=255) cgcTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGccc < 1:5483147/101‑1 (MQ=255) gcTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCt > 1:2022771/1‑101 (MQ=255) cTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACAAGTTTAATCTGGCCCTc < 1:6421371/101‑1 (MQ=255) tGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCg > 1:9338/1‑101 (MQ=255) tGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCg > 1:2196635/1‑101 (MQ=255) tGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCg > 1:4537856/1‑101 (MQ=255) tGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCg > 1:8164303/1‑101 (MQ=255) ccTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGAcc < 1:1704835/101‑1 (MQ=255) cTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGAccc > 1:3372017/1‑101 (MQ=255) cGAAAGGGCATACGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGttt > 1:5797350/1‑101 (MQ=255) aaaGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTAc > 1:103572/1‑101 (MQ=255) aaaGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTAc < 1:12569708/101‑1 (MQ=255) gCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTAccgccc > 1:12410790/1‑101 (MQ=255) cATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTAccgcccg > 1:14157818/1‑101 (MQ=255) aTCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTAccgcccgc > 1:283161/1‑101 (MQ=255) aTCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTAccgcccgc < 1:11784857/101‑1 (MQ=255) gggCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCtt < 1:5227467/101‑1 (MQ=255) ggCGCTCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTa > 1:8463108/1‑101 (MQ=255) gcgcAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTATCa < 1:5663406/101‑1 (MQ=255) gcgcAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTATCa > 1:9291134/1‑101 (MQ=255) cgcAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTATCAc < 1:8702113/101‑1 (MQ=255) cgcAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTATCAc > 1:3265297/1‑101 (MQ=255) cgcAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTATCAc < 1:11470722/101‑1 (MQ=255) | AGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATAAGATTGCTGCCCACGCCGCTGACCTGGCGAAAGGGCATCCGGGCGCGCAAATTCGCGATAACGCCATGTCGAAAGCCCGCTTCGAATTTCGCTGGGAAGACCAGTTTAATCTGGCCCTCGACCCGTTTACCGCCCGCGCTTATCACG > NC_007779/3442080‑3442280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |