| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,451,682 | C→G | 26.3% | S1252T (AGC→ACC) | rpoB ← | RNA polymerase subunit beta |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,451,682 | 0 | C→G | 26.3% | 292.2 ‑1.2 ‑0.3 | 323 | S1252T (AGC→ACC) | rpoB | RNA polymerase subunit beta |
| Reads supporting (aligned to +/- strand): new base (45/40): ref base (110/128): total (155/168) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.13e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.20e-01 | ||||||||||
Only 100 of 332 total aligned reads displayed.
GTATGCTGCGCCGTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTGTTC > NC_007779/3451582‑3451782 | tATGCTGCGCCGTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCt < 1:8090103/101‑1 (MQ=255) aTGCTGCGCCGTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTg < 1:6935498/101‑1 (MQ=255) tgctgcGCCGTATGTTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGt < 1:10080240/101‑1 (MQ=255) tgctgcGCCGTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGt < 1:8175806/101‑1 (MQ=255) gctgcGCCGTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTa > 1:11110954/1‑101 (MQ=255) cgcCGTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGaa < 1:3117909/101‑1 (MQ=255) gcCGTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAAc < 1:4001669/101‑1 (MQ=255) gcCGTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAAc > 1:10871125/1‑101 (MQ=255) cGTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCg > 1:7390733/1‑101 (MQ=255) cGTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCg < 1:7160528/101‑1 (MQ=255) gTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCgg < 1:2375321/101‑1 (MQ=255) tGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTgg > 1:2545882/1‑101 (MQ=255) gcctgcattgcCCACACCTCCATCTCACCGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGa < 1:11355403/92‑1 (MQ=255) ttCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAAc < 1:428171/101‑1 (MQ=255) tCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAAcg < 1:9444628/101‑1 (MQ=255) cAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAAcgcg > 1:4786918/1‑101 (MQ=255) ttgcCCACACCTCCATCTCACCGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAAcgagcg > 1:13981927/3‑101 (MQ=255) ttgcCCACACCTCCATCTCACCGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAAcgagcg > 1:12235822/3‑101 (MQ=255) cgcCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGt < 1:3775316/101‑1 (MQ=255) gcCTACACTTCCATCTCCCCGAAACGCTGACCAGCGAACTGTGGCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTg < 1:4179132/101‑1 (MQ=255) ccACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCa > 1:13623028/1‑101 (MQ=255) ccACACCTCCATCTCACCGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTgaa > 1:13249506/1‑99 (MQ=255) ccACACCTCCATCTCACCGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTgaa > 1:12768691/1‑99 (MQ=255) cacaCCTCCATCTCACCGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGGAATCATGGAGTACGGACCGGTGGAACGAGCGTGAAt > 1:10467200/1‑101 (MQ=255) cacTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCt > 1:2074035/1‑101 (MQ=255) cacTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCt > 1:6040389/1‑101 (MQ=255) cacCTCCATCTCACCGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCt > 1:1604873/1‑101 (MQ=255) acTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCAAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCtt < 1:7877318/101‑1 (MQ=255) ccATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTgtcg > 1:5349500/1‑101 (MQ=255) ccATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTgtcg < 1:12985426/101‑1 (MQ=255) ccATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTgtcg > 1:8573507/1‑101 (MQ=255) ccATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTgtcg < 1:704184/101‑1 (MQ=255) aTCTCCCCGAAACGCTAACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGGGGAACGCGCGTGCATCTTgtcgtc > 1:9580784/1‑101 (MQ=255) aTCTCACCGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTctcgtc > 1:10242954/1‑101 (MQ=255) tctcCCCGAAACGCTGACCACCGAACTGGGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGtcgtcg > 1:6715444/1‑101 (MQ=255) tcCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGAc > 1:12942468/1‑101 (MQ=255) ccccGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGAcc < 1:5182951/101‑1 (MQ=255) ccccGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGAcc > 1:14010071/1‑101 (MQ=255) accGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCa > 1:219381/2‑101 (MQ=255) ccGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAg < 1:12386328/101‑1 (MQ=255) ccGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAg < 1:1445591/101‑1 (MQ=255) ccGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGCAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAg > 1:5617697/1‑101 (MQ=255) gAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAggt < 1:394407/101‑1 (MQ=255) gAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAggt > 1:14201154/1‑101 (MQ=255) gAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAggt > 1:9159648/1‑101 (MQ=255) gAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAggt < 1:11235216/101‑1 (MQ=255) agcGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAggtgg < 1:173922/99‑1 (MQ=255) aaCGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAggtgg < 1:1858172/101‑1 (MQ=255) aaCGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAggtgg < 1:6236916/101‑1 (MQ=255) cGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGtt < 1:3851659/101‑1 (MQ=255) cGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGtt < 1:11974156/101‑1 (MQ=255) gCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTc > 1:6409027/1‑101 (MQ=255) gCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTc > 1:7503140/1‑101 (MQ=255) tGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAg > 1:8931879/1‑101 (MQ=255) tGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAg < 1:14249938/101‑1 (MQ=255) gACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGt > 1:14071838/1‑101 (MQ=255) gACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAgc > 1:6604200/1‑100 (MQ=255) ccaccGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGGGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGttc > 1:4564443/1‑100 (MQ=255) ccaccGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAggtgggccacctc > 1:12703807/1‑93 (MQ=255) accGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCa < 1:8901055/101‑1 (MQ=255) ccGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAg < 1:3314354/101‑1 (MQ=255) gAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCAGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGca > 1:9049752/1‑101 (MQ=255) aaCTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGcat < 1:12552436/101‑1 (MQ=255) cTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGcatgt > 1:7990466/1‑101 (MQ=255) cTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGcatgt > 1:1133298/1‑101 (MQ=255) cTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGcatgt > 1:5030945/1‑101 (MQ=255) tgagCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGcatgta < 1:1646116/98‑1 (MQ=255) tgagCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGcatgta < 1:8440592/98‑1 (MQ=255) gCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGcatgtacat < 1:9819563/101‑1 (MQ=255) ttACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGcatgtacatgta > 1:10539371/1‑101 (MQ=255) ttACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTACATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGcatgtacatgta < 1:13084466/101‑1 (MQ=255) tACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGcatgtacatgtag > 1:4053760/1‑100 (MQ=255) accaccCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAAc < 1:7114749/101‑1 (MQ=255) accaccCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAAc < 1:6555346/101‑1 (MQ=255) caccCAGCGGCTGGTGGGTAATCATGGAGTACGGACCGGTGGAACGATCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGCATGTACATGTAGccc < 1:3653803/101‑2 (MQ=255) caccCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGCATGTACATGTAGccc > 1:4243213/1‑100 (MQ=255) caccCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCa < 1:3410612/101‑1 (MQ=255) caccCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCa < 1:2812134/101‑1 (MQ=255) cccAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAAc < 1:11848960/101‑1 (MQ=255) ccAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGCATGTACATGTAGCCCAcc > 1:5932626/1‑100 (MQ=255) ccAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGTTGGTTCAGTTTCAGCATGTACATGTAACCAACg < 1:465748/101‑1 (MQ=255) aGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGCATGTACATGTAGCCCAccga > 1:7741964/1‑98 (MQ=255) cGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGCATGTACATGTAGCCCAccgaaa < 1:10661985/101‑6 (MQ=255) cGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTa < 1:10013960/101‑1 (MQ=255) cGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTa < 1:11654012/101‑1 (MQ=255) gctgctGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGCATGTACATGTAGCCCAccgaaacc < 1:8229951/101‑8 (MQ=255) tgctgAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCgg > 1:9668371/1‑101 (MQ=255) tgctgAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCgg > 1:5839343/1‑101 (MQ=255) gctgAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGa > 1:8734832/1‑101 (MQ=255) ctgAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGAc < 1:11523670/101‑1 (MQ=255) tgAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACg > 1:10185353/1‑101 (MQ=255) gAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGc > 1:8649224/1‑101 (MQ=255) aGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCt < 1:224612/101‑1 (MQ=255) aGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCt > 1:10982784/1‑101 (MQ=255) gTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTc < 1:4430484/101‑1 (MQ=255) tAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCg > 1:13464533/1‑101 (MQ=255) ccAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAAc > 1:7620123/1‑101 (MQ=255) aGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTg > 1:2649020/1‑101 (MQ=255) ggCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTGt > 1:13902832/1‑101 (MQ=255) cTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTGTTc > 1:13668135/1‑101 (MQ=255) | GTATGCTGCGCCGTATGCTTCCAGCGCCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTGTTC > NC_007779/3451582‑3451782 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |