Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 3,460,411 A→G 3.5% T109T (ACT→ACC)  tufB ← protein chain elongation factor EF‑Tu

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0077793,460,4110A→G 3.5% 8.4 ‑0.9 ‑0.4173T109T (ACT→ACC) tufBprotein chain elongation factor EF‑Tu
Reads supporting (aligned to +/- strand):  new base (4/2):  ref base (70/97):  total (74/99)
Fisher's exact test strand distribution p-value = 4.04e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.31e-01

Only 100 of 180 total aligned reads displayed.

GTCGCATTTGTTCAGGAACACGATGATGTACGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGT  >  NC_007779/3460321‑3460511
                                                                                          |                                                                                                    
                          tgTACGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTgc                                                                  <  1:16635/101‑1 (MQ=11)
                          tgTACGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTgc                                                                  <  1:10865830/101‑1 (MQ=11)
                          tgTACGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGCCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTgc                                                                  >  1:1513554/1‑101 (MQ=11)
                           gTACGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCACGATAGCGCCGCCCACCTgcg                                                                 >  1:9217005/1‑101 (MQ=11)
                           gTACGGAACGCCTACCCGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTgcg                                                                 <  1:2985554/101‑1 (MQ=14)
                            tACGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTgcgc                                                                >  1:13115759/1‑101 (MQ=32)
                             aCGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCgca                                                               <  1:13314867/101‑1 (MQ=32)
                             aCGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCgca                                                               <  1:7054284/101‑1 (MQ=32)
                              cGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCgcag                                                              <  1:11935678/101‑1 (MQ=32)
                              cGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCgcag                                                              <  1:6964239/101‑1 (MQ=32)
                              cGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCgcag                                                              <  1:10094503/101‑1 (MQ=32)
                               ggAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCgcagc                                                             <  1:6673736/101‑1 (MQ=32)
                                gAACGCCTCCCTGCCGCCCCAGCGGGATGTGCTCACGAGTCTG‑GGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCAc                                                           <  1:2514393/101‑1 (MQ=11)
                                gAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCgcagca                                                            <  1:11057002/101‑1 (MQ=32)
                                gAACCCCTACCGGACGCCCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCgcagca                                                            <  1:8521687/101‑1 (MQ=255)
                                 aaCGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCGGTCCATCTGCGCAGCAc                                                           >  1:10104119/1‑101 (MQ=17)
                                 aaCGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCAc                                                           <  1:5488766/101‑1 (MQ=32)
                                 aaCGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCAc                                                           >  1:5468987/1‑101 (MQ=32)
                                 aaCGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCAc                                                           >  1:7812429/1‑101 (MQ=32)
                                  aCGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCAcc                                                          <  1:2916375/101‑1 (MQ=32)
                                  aCGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCAcc                                                          >  1:9960317/1‑101 (MQ=32)
                                   cGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCg                                                         >  1:5570706/1‑101 (MQ=32)
                                   cGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCg                                                         <  1:3104508/101‑1 (MQ=32)
                                     ccTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGt                                                       >  1:10639575/1‑101 (MQ=32)
                                      cTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTg                                                      >  1:8139907/1‑101 (MQ=32)
                                      cTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTg                                                      >  1:10583132/1‑101 (MQ=32)
                                       tACCTGACGACCCAGCAGGGTGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCACCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGa                                                     <  1:2411032/101‑1 (MQ=12)
                                       tACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGa                                                     <  1:6420087/101‑1 (MQ=32)
                                       tACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGa                                                     <  1:837475/101‑1 (MQ=33)
                                       tACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGa                                                     <  1:206638/101‑1 (MQ=32)
                                       agccTGACGGCCCAGCAGGATTTGCTCACGAGTCTTCGGCATCGGGCCGTTAGGCGCAGCAACTACCAGGATCGCGACGTCCATCTGCGCAGCACCGGTGa                                                     <  1:2277641/99‑1 (MQ=11)
                                         ccTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATc                                                   >  1:7168528/1‑101 (MQ=32)
                                         ccTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATc                                                   <  1:14230781/101‑1 (MQ=33)
                                          cTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCa                                                  <  1:5210296/101‑1 (MQ=32)
                                           tGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGAATCGGGCCGTCAGTCGCAGCAACTCCCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCAt                                                 <  1:216239/101‑1 (MQ=12)
                                            gacgacCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATg                                                <  1:12006955/101‑1 (MQ=33)
                                             acgacCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGt                                               >  1:2351648/1‑101 (MQ=32)
                                              cgacCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGtt                                              <  1:11269082/101‑1 (MQ=33)
                                              cgacCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGtt                                              >  1:408835/1‑101 (MQ=32)
                                              cgacCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGtt                                              >  1:12937700/1‑101 (MQ=32)
                                               gacCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGttt                                             <  1:10901521/101‑1 (MQ=33)
                                                acCCAGTAGGATGTGGTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGtttt                                            <  1:3933082/101‑1 (MQ=12)
                                                 cccAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGttttt                                           <  1:4663034/101‑1 (MQ=32)
                                                  ccAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTa                                          <  1:4562021/101‑1 (MQ=32)
                                                    agcagGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGCGATCATGTTTTTAAc                                        >  1:475459/1‑101 (MQ=17)
                                                      cagGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACAt                                      <  1:12395432/101‑1 (MQ=33)
                                                      cagGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACAt                                      <  1:2818805/101‑1 (MQ=32)
                                                       agGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATa                                     >  1:7730310/1‑101 (MQ=32)
                                                        ggATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAg                                    >  1:4143176/1‑101 (MQ=32)
                                                         gATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGt                                   <  1:14319387/101‑1 (MQ=33)
                                                          acgtgCTCACGGGTCTGCGGCATCGGACCGTCGGTAGCGGCGACAACCAGAATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTCTTGATGTAGTc                                  <  1:8423480/99‑1 (MQ=2)
                                                          acgtgCTCACGGGTCTGCGGCATCGGACCGTCGGTAGCGGCGACAACCAGAATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTCTTGATGTAGTc                                  <  1:14062938/99‑1 (MQ=2)
                                                          aTGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTc                                  <  1:14108168/101‑1 (MQ=32)
                                                          aTGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTc                                  <  1:3387498/101‑1 (MQ=33)
                                                           tgtgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCg                                 >  1:9857885/1‑101 (MQ=32)
                                                           tgtgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCg                                 <  1:12864913/101‑1 (MQ=33)
                                                            gtgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCgg                                <  1:3050726/101‑1 (MQ=32)
                                                             tgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGc                               >  1:11017790/1‑101 (MQ=32)
                                                             tgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGc                               >  1:11098554/1‑101 (MQ=32)
                                                             tgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGc                               <  1:9659325/101‑1 (MQ=33)
                                                             tgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGACCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGc                               >  1:12333985/1‑101 (MQ=17)
                                                              gCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCCGCACCGGTGATCATGTTTTTAACATAGTCGGCg                              >  1:9764130/1‑101 (MQ=17)
                                                              gCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCg                              <  1:3898591/101‑1 (MQ=33)
                                                              gCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCg                              <  1:14204452/101‑1 (MQ=33)
                                                              gCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCg                              >  1:9064540/1‑101 (MQ=32)
                                                               cTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGt                             <  1:2476488/101‑1 (MQ=32)
                                                               cTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGt                             <  1:8760569/101‑1 (MQ=33)
                                                               cTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGt                             <  1:7296037/101‑1 (MQ=33)
                                                                tCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTg                            >  1:11326707/1‑101 (MQ=32)
                                                                tCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTg                            <  1:11670553/101‑1 (MQ=33)
                                                                 cACGAGTCTGCGGCGTCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGc                           >  1:86359/1‑101 (MQ=17)
                                                                 cACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGc                           <  1:11942475/101‑1 (MQ=33)
                                                                  aCGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGcc                          <  1:2515462/101‑1 (MQ=32)
                                                                   cGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGccc                         >  1:2538304/1‑101 (MQ=32)
                                                                    gAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGcccc                        >  1:12589360/1‑101 (MQ=32)
                                                                     aGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTTCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCg                       <  1:10299155/101‑1 (MQ=17)
                                                                     aGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCg                       >  1:5069497/1‑101 (MQ=32)
                                                                      gTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCgg                      <  1:9390851/101‑1 (MQ=32)
                                                                      gTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCgg                      <  1:13272433/101‑1 (MQ=32)
                                                                       tCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCggg                     >  1:5855122/1‑101 (MQ=32)
                                                                        cTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGc                    <  1:4169388/101‑1 (MQ=32)
                                                                         tGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCa                   <  1:13447620/101‑1 (MQ=32)
                                                                         tGCGGAATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCa                   <  1:12797691/101‑1 (MQ=17)
                                                                          gCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAg                  >  1:1885422/1‑101 (MQ=32)
                                                                          gCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAg                  <  1:7236762/101‑1 (MQ=32)
                                                                          gCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAg                  <  1:1548087/101‑1 (MQ=32)
                                                                            ggCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTc                >  1:10242610/1‑101 (MQ=32)
                                                                            ggCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTc                >  1:13842390/1‑101 (MQ=32)
                                                                             gCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCt               <  1:4335061/101‑1 (MQ=32)
                                                                               aTCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTAc             <  1:10532310/101‑1 (MQ=32)
                                                                                tCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTACGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACg            <  1:8942136/101‑1 (MQ=17)
                                                                                 cGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACgt           >  1:6702285/1‑101 (MQ=32)
                                                                                    accGTCGGTAGCGGCGACAACCAGAATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTCTTGATGTAGTCGGCGTGGCCCGGAGCGTCGACgtgag        >  1:2737931/2‑99 (MQ=2)
                                                                                     ccGTCGGTAGCGGCGACAACCAGAATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTCTTGATGTAGTCGGCGTGGCCCGGAGCGTCGACGTGAGc       >  1:12723464/1‑101 (MQ=2)
                                                                                     ccGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGc       <  1:4822863/101‑1 (MQ=32)
                                                                                      cGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCg      >  1:338332/1‑101 (MQ=32)
                                                                                       gTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGt     >  1:7449069/1‑101 (MQ=32)
                                                                                          aGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGt  <  1:6713589/101‑1 (MQ=32)
                                                                                          aGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGt  >  1:659387/1‑101 (MQ=33)
                                                                                          aGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGt  <  1:2881704/101‑1 (MQ=32)
                                                                                          |                                                                                                    
GTCGCATTTGTTCAGGAACACGATGATGTACGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGT  >  NC_007779/3460321‑3460511

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.