Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 3,460,423 T→A 2.5% V105V (GTA→GTT)  tufB ← protein chain elongation factor EF‑Tu

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0077793,460,4230T→A 2.5% 7.5 ‑0.4 ‑1.8199V105V (GTA→GTT) tufBprotein chain elongation factor EF‑Tu
Reads supporting (aligned to +/- strand):  new base (3/2):  ref base (83/111):  total (86/113)
Fisher's exact test strand distribution p-value = 6.54e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.44e-02

Only 100 of 205 total aligned reads displayed.

TGTACGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGG  >  NC_007779/3460347‑3460523
                                                                            |                                                                                                    
tgTACGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTgc                                                                              <  1:10865830/101‑1 (MQ=11)
 gTACGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCACGATAGCGCCGCCCACCTgcg                                                                             >  1:9217005/1‑101 (MQ=11)
  tACGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTgcgc                                                                            >  1:13584827/1‑101 (MQ=32)
   aCGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCgca                                                                           >  1:14131221/1‑101 (MQ=32)
   aCGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCgca                                                                           <  1:3901223/101‑1 (MQ=32)
   aCGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCgca                                                                           <  1:5738087/101‑1 (MQ=32)
    cGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCgcag                                                                          <  1:11935678/101‑1 (MQ=32)
    cGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCgcag                                                                          <  1:6964239/101‑1 (MQ=32)
    cGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCgcag                                                                          <  1:10094503/101‑1 (MQ=32)
      gAACGCCTCCCTGCCGCCCCAGCGGGATGTGCTCACGAGTCTG‑GGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCAc                                                                       <  1:2514393/101‑1 (MQ=11)
      gAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCgcagca                                                                        >  1:11955480/1‑101 (MQ=32)
       aaCGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCAc                                                                       <  1:5488766/101‑1 (MQ=32)
       aaCGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCAc                                                                       >  1:7812429/1‑101 (MQ=32)
        aCGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCAcc                                                                      <  1:10887871/101‑1 (MQ=32)
        aCGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCAcc                                                                      >  1:153502/1‑101 (MQ=32)
         cGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCg                                                                     >  1:5570706/1‑101 (MQ=32)
         cGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCg                                                                     >  1:4112830/1‑101 (MQ=32)
         cGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCg                                                                     <  1:3950570/101‑1 (MQ=32)
         cGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCg                                                                     <  1:3104508/101‑1 (MQ=32)
         cGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCg                                                                     >  1:9953280/1‑101 (MQ=32)
            ctgccTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTg                                                                  <  1:11052773/98‑1 (MQ=17)
            cTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTg                                                                  <  1:5438023/101‑1 (MQ=32)
            cTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTg                                                                  >  1:10583132/1‑101 (MQ=32)
             tACCTGACGACCCAGCAGGGTGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCACCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGa                                                                 <  1:2411032/101‑1 (MQ=12)
             tACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGa                                                                 <  1:6634268/101‑1 (MQ=33)
             tACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGa                                                                 >  1:12351997/1‑101 (MQ=32)
             tACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGa                                                                 <  1:206638/101‑1 (MQ=32)
             agccTGACGGCCCAGCAGGATTTGCTCACGAGTCTTCGGCATCGGGCCGTTAGGCGCAGCAACTACCAGGATCGCGACGTCCATCTGCGCAGCACCGGTGa                                                                 <  1:2277641/99‑1 (MQ=11)
                cTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCa                                                              >  1:13316788/1‑101 (MQ=32)
                 tGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCAt                                                             >  1:5165612/1‑101 (MQ=32)
                  gacgacCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATg                                                            <  1:12006955/101‑1 (MQ=33)
                  gacgacCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCACAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATg                                                            <  1:10294883/101‑1 (MQ=17)
                   acgacCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGt                                                           >  1:2351648/1‑101 (MQ=32)
                    cgacCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGtt                                                          <  1:11269082/101‑1 (MQ=33)
                     gacCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCTGCACCGGTGATCATGttt                                                         <  1:8496988/101‑1 (MQ=17)
                     gacCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGttt                                                         >  1:2927842/1‑101 (MQ=32)
                       cccAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGttttt                                                       <  1:4663034/101‑1 (MQ=32)
                        ccAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTa                                                      <  1:4562021/101‑1 (MQ=32)
                          agcagGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGCGATCATGTTTTTAAc                                                    >  1:475459/1‑101 (MQ=17)
                            cagGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACAt                                                  <  1:14271181/101‑1 (MQ=33)
                            cagGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACAt                                                  <  1:2818805/101‑1 (MQ=32)
                             agGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATa                                                 <  1:3879539/101‑1 (MQ=33)
                             agGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATa                                                 >  1:7730310/1‑101 (MQ=32)
                                acgtgCTCACGGGTCTGCGGCATCGGACCGTCGGTAGCGGCGACAACCAGAATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTCTTGATGTAGTc                                              <  1:14062938/99‑1 (MQ=2)
                                 tgtgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCg                                             >  1:9857885/1‑101 (MQ=32)
                                 tgtgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCg                                             <  1:11017440/101‑1 (MQ=33)
                                  gtgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCgg                                            <  1:12747789/101‑1 (MQ=33)
                                   tgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGc                                           >  1:11098554/1‑101 (MQ=32)
                                   tgCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGc                                           <  1:9659325/101‑1 (MQ=33)
                                    gCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCCGCACCGGTGATCATGTTTTTAACATAGTCGGCg                                          >  1:9764130/1‑101 (MQ=17)
                                    gCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCg                                          >  1:8421088/1‑101 (MQ=32)
                                     cTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGt                                         <  1:2476488/101‑1 (MQ=32)
                                     cTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGt                                         <  1:7296037/101‑1 (MQ=33)
                                     cTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGt                                         <  1:8760569/101‑1 (MQ=33)
                                      tCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTg                                        >  1:11326707/1‑101 (MQ=32)
                                      tCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTg                                        <  1:11670553/101‑1 (MQ=33)
                                         cGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGccc                                     >  1:2538304/1‑101 (MQ=32)
                                         cGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGccc                                     >  1:716395/1‑101 (MQ=32)
                                          gAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGcccc                                    >  1:12589360/1‑101 (MQ=32)
                                            gTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCgg                                  <  1:9390851/101‑1 (MQ=32)
                                            gTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCgg                                  <  1:12801146/101‑1 (MQ=32)
                                             tCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCggg                                 >  1:8319618/1‑101 (MQ=32)
                                              cTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGc                                <  1:4169388/101‑1 (MQ=32)
                                               tGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCa                               <  1:13110953/101‑1 (MQ=32)
                                                gCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAg                              <  1:7236762/101‑1 (MQ=32)
                                                gCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAg                              >  1:1885422/1‑101 (MQ=32)
                                                 cGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGt                             >  1:8613574/1‑101 (MQ=32)
                                                 cGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGCGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGt                             >  1:3030218/1‑101 (MQ=17)
                                                  ggCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTc                            >  1:13842390/1‑101 (MQ=32)
                                                   gCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCt                           <  1:4335061/101‑1 (MQ=32)
                                                   gCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCACCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCt                           <  1:8950702/101‑1 (MQ=17)
                                                    cATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTa                          <  1:6547656/101‑1 (MQ=32)
                                                     aTCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTAc                         <  1:10130337/101‑1 (MQ=32)
                                                     aTCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTAc                         >  1:1577835/1‑101 (MQ=32)
                                                     aTCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTAc                         <  1:10532310/101‑1 (MQ=32)
                                                       cGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACgt                       >  1:12887069/1‑101 (MQ=32)
                                                       cGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACgt                       >  1:6702285/1‑101 (MQ=32)
                                                        gggCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACgtg                      >  1:13294980/1‑101 (MQ=32)
                                                         ggCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACgtgt                     <  1:14206461/101‑1 (MQ=32)
                                                          accGTCGGTAGCGGCGACAACCAGAATCGCGCCGTCCATCTGAGCAGCACCGGTGATCATGTTCTTGATGTAGTCGGCGTGGCCCGGAGCGTCGACgtgag                    >  1:2737931/2‑99 (MQ=2)
                                                           ccGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGc                   <  1:4822863/101‑1 (MQ=32)
                                                            cGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCg                  >  1:338332/1‑101 (MQ=32)
                                                             gTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGt                 >  1:7449069/1‑101 (MQ=32)
                                                                aGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGt              <  1:9165241/101‑1 (MQ=32)
                                                                aGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGt              <  1:2881704/101‑1 (MQ=32)
                                                                aGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGt              <  1:6713589/101‑1 (MQ=32)
                                                                  tCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGa            <  1:1030432/101‑1 (MQ=32)
                                                                  gcGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGa            <  1:14319832/100‑1 (MQ=17)
                                                                    gcagcaACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACg          >  1:1688652/1‑101 (MQ=33)
                                                                      agcaACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACggg        >  1:2530598/1‑101 (MQ=32)
                                                                       gcaACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGt       >  1:12192084/1‑101 (MQ=33)
                                                                       gcaACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGt       <  1:13121790/101‑1 (MQ=32)
                                                                         aaCTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCg     >  1:3052739/1‑101 (MQ=33)
                                                                         aaCTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCg     <  1:587277/101‑1 (MQ=32)
                                                                         aaCTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCg     <  1:10830807/101‑1 (MQ=32)
                                                                          aCTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCgg    >  1:5590554/1‑101 (MQ=32)
                                                                          aCTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCgg    >  1:4925659/1‑101 (MQ=33)
                                                                            tACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCgggg  <  1:8812247/101‑1 (MQ=32)
                                                                            tACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCgggg  >  1:4544242/1‑101 (MQ=32)
                                                                            tACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCgggg  <  1:6231784/101‑1 (MQ=32)
                                                                            |                                                                                                    
TGTACGGAACGCCTACCTGACGACCCAGCAGGATGTGCTCACGAGTCTGCGGCATCGGGCCGTCAGTCGCAGCAACTACCAGGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGG  >  NC_007779/3460347‑3460523

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.