| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,460,527 | C→G | 4.7% | D71H (GAC→CAC) | tufB ← | protein chain elongation factor EF‑Tu |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,460,527 | 0 | C→G | 4.7% | 8.1 0.0 ‑0.4 | 107 | D71H (GAC→CAC) | tufB | protein chain elongation factor EF‑Tu |
| Reads supporting (aligned to +/- strand): new base (3/2): ref base (54/48): total (57/50) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.91e-01 | ||||||||||
Only 100 of 108 total aligned reads displayed.
GGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCACCGCCGTAGGTTTTA > NC_007779/3460428‑3460627 | ggATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCg > 1:13194664/1‑101 (MQ=32) aTCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTa > 1:4168904/1‑101 (MQ=33) tCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTAt > 1:4151669/1‑101 (MQ=33) tCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTAt < 1:5313408/101‑1 (MQ=32) tCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTAt > 1:1825519/1‑101 (MQ=33) tCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTAt < 1:9197416/101‑1 (MQ=32) cgcgCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTAtt > 1:3416264/1‑101 (MQ=33) cgcgCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTAtt < 1:4180424/101‑1 (MQ=32) cgcgCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTAtt > 1:1687880/1‑101 (MQ=33) cgcgCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTAtt < 1:14258928/101‑1 (MQ=32) cgcgCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTAtt < 1:12669635/101‑1 (MQ=32) gcgcCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTATCATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTc < 1:12402767/101‑1 (MQ=17) gcgcCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTAttt > 1:7293302/1‑100 (MQ=18) gcgcCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTc < 1:3816259/101‑1 (MQ=32) gcgcCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTc > 1:8980720/1‑101 (MQ=33) gcgcCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTc > 1:8224250/1‑101 (MQ=33) cgcCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCa > 1:10374659/1‑101 (MQ=33) cgcCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCa > 1:9095500/1‑101 (MQ=33) gcCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCaa > 1:53077/1‑101 (MQ=32) gcCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCaa > 1:806332/1‑101 (MQ=32) ccGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAAc > 1:5395579/1‑101 (MQ=32) ccGTCCAGCTGCACAGCGCCGGTGATCATGTTTTTAACGTAGTCGGCGTGCCCCGGGCGGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAAc < 1:11266308/101‑1 (MQ=11) cGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACg > 1:4741910/1‑101 (MQ=32) cGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACg < 1:1880076/101‑1 (MQ=32) cGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACg > 1:13686715/1‑101 (MQ=32) gTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGt < 1:9685241/101‑1 (MQ=32) gTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGt > 1:5245685/1‑101 (MQ=32) gTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGt < 1:235096/101‑1 (MQ=32) gTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGt > 1:5803368/1‑101 (MQ=32) gTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGt > 1:581225/1‑101 (MQ=32) tCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTg > 1:7738670/1‑101 (MQ=32) tCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTg > 1:9026552/1‑101 (MQ=32) ccATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTga < 1:12558943/101‑1 (MQ=32) cATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTgag > 1:6720675/1‑101 (MQ=32) cATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGGCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGGGACGGGTCGGGGTGTCGTATTCAACGTgag < 1:4177405/101‑1 (MQ=255) tCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGaa < 1:10770205/101‑1 (MQ=32) tCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGaa < 1:9115679/101‑1 (MQ=32) tCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGaa < 1:7253990/101‑1 (MQ=32) cTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAg > 1:1656236/1‑101 (MQ=32) cTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAg < 1:13694847/101‑1 (MQ=32) cTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAg > 1:10489670/1‑101 (MQ=32) cTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGGCGGGGTGTCGTATTCAACGTGAGAAg > 1:2716497/1‑101 (MQ=17) tGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAgt < 1:2781936/101‑1 (MQ=32) tGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAgt > 1:557233/1‑101 (MQ=32) gcgcAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAgtg > 1:10474015/1‑101 (MQ=31) gcgcAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGGCGGGGTGTCGTATTCAACGTGAGAAgag > 1:641511/1‑99 (MQ=14) cgcAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAgtgt > 1:10083321/1‑101 (MQ=11) cgcAGCACCGGTGATCATGTTTTTAACATAATCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAgtgt > 1:8243787/1‑101 (MQ=11) agcaCCGGTGATCATGTTCTTGATGTAGTCGGCGTGGCCCGGAGCGTCGACGTGAGCGTAGTGACGCTTCTCGGTCTGGTACTCAACGTgcgagacgttga < 1:6113715/101‑9 (MQ=0) agcaCCGGTGATCATGTTCTTGATGTAGTCGGCGTGGCCCGGAGCGTCGACGTGAGCGTAGTGACGCTTCTCGGTCTGGTACTCAACGTgcgagacgttga > 1:8128718/1‑93 (MQ=0) agcaCCGGTGATCATGTTCTTGATGTAGTCGGCGTGGCCCGGAGCGTCGACGTGAGCGTAGTGACGCTTCTCGGTCTGGTACTCAACGTgcgagacgttga > 1:11776121/1‑93 (MQ=0) gcaCCGGTGATCATGTTCTTGATGTAGTCGGCGTGGCCCGGAGCGTCGACGTGAGCGTAGTGACGCTTCTCGGTCTGGTACTCAACGTGCGAGACGTTGAt < 1:7506146/101‑1 (MQ=0) gcaCCGGTGATCATGTTCTTGATGTAGTCGGCGTGGCCCGGAGCGTCGACGTGAGCGTAGTGACGCTTCTCGGTCTGGTACTCAACGTGCGAGACGTTGAt > 1:5258032/1‑101 (MQ=0) tgCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATgcgc < 1:10379056/101‑1 (MQ=31) tgCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATgcgc < 1:2823655/101‑1 (MQ=31) tgCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATgcgc < 1:2356005/101‑1 (MQ=31) gCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGcgcg > 1:1084120/1‑101 (MQ=32) gCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGcgcg > 1:11789051/1‑101 (MQ=32) cGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGa > 1:7990623/1‑101 (MQ=32) gTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGag < 1:9298572/101‑1 (MQ=32) gTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGag < 1:9440255/101‑1 (MQ=32) tAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGagc > 1:14129690/1‑101 (MQ=32) tAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGagc < 1:9095486/101‑1 (MQ=32) aGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGagca < 1:11218099/101‑1 (MQ=32) aGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGagca < 1:8901959/101‑1 (MQ=32) aGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGagca < 1:9581640/101‑1 (MQ=32) aGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGagca > 1:12336812/1‑101 (MQ=32) aGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGagca < 1:12402720/101‑1 (MQ=32) aGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGagca < 1:5175221/101‑1 (MQ=32) aGTGACGGGTCGGGGGGTCGTATTCAACGGGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGagca > 1:6835153/1‑101 (MQ=12) gTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGagcag < 1:4699529/101‑1 (MQ=32) gTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGagcag > 1:1842467/1‑101 (MQ=32) tGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGagcagc < 1:10270532/101‑1 (MQ=32) tGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGagcagc < 1:3174188/101‑1 (MQ=32) gACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAgcagca < 1:1867955/101‑1 (MQ=32) gACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAgcagca > 1:12795478/1‑101 (MQ=32) cGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCAcc < 1:11221820/101‑1 (MQ=32) cGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCAcc < 1:3284016/101‑1 (MQ=32) gggTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCAccg > 1:2082079/1‑101 (MQ=32) gggTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCAccg > 1:3186677/1‑101 (MQ=32) gggTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCAccg < 1:12748809/101‑1 (MQ=32) gTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCAccgcc < 1:3486763/101‑1 (MQ=33) tCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCAccgccg < 1:7409129/101‑1 (MQ=33) tCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCAccgccg < 1:8493788/101‑1 (MQ=33) cGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCACCGCCGt > 1:6263730/1‑101 (MQ=32) ggggTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCACCGCCGTa < 1:7791451/101‑1 (MQ=32) ggggTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCACCGCCGTa > 1:7580046/1‑101 (MQ=32) ggggTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCACCGCCGTa > 1:4084213/1‑101 (MQ=32) ggggTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCACCGCCGTa > 1:13287363/1‑101 (MQ=32) gggTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCACCGCCGTAg < 1:6017919/101‑1 (MQ=33) gggTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCACCGCCGTAg < 1:1451294/101‑1 (MQ=33) gggTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCACCGCCGTAg > 1:11798185/1‑101 (MQ=32) ggTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCACCGCCGTAgg > 1:8345714/1‑101 (MQ=32) gtgtCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCACCGCCGTAGGt > 1:6645731/1‑101 (MQ=32) gtgtCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCACCGCCGTAGGt > 1:12556741/1‑101 (MQ=32) tgtCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCACCGCCGTAGGtt < 1:6050467/101‑1 (MQ=33) tgtCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCACCGCCGTAGGtt > 1:10543338/1‑101 (MQ=32) gtCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTGTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCACCGCCGTAGGttt < 1:2989570/101‑1 (MQ=17) tCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCACCGCCGTAGGtttt < 1:8080668/101‑1 (MQ=32) cGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCAGCGCCGTAGGTTTTa > 1:10074961/1‑101 (MQ=17) | GGATCGCGCCGTCCATCTGCGCAGCACCGGTGATCATGTTTTTAACATAGTCGGCGTGCCCCGGGCAGTCTACGTGTGCGTAGTGACGGGTCGGGGTGTCGTATTCAACGTGAGAAGTGTTGATGGTGATACCACGAGCTTTTTCTTCCGGCGCGTTATCGATCTGGTCGAATGCGCGAGCAGCACCGCCGTAGGTTTTA > NC_007779/3460428‑3460627 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |