| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,682,571 | C→G | 6.6% | L211L (CTG→CTC) | ilvD ← | dihydroxyacid dehydratase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,682,571 | 0 | C→G | 6.6% | 45.2 ‑1.1 ‑0.4 | 256 | L211L (CTG→CTC) | ilvD | dihydroxyacid dehydratase |
| Reads supporting (aligned to +/- strand): new base (5/12): ref base (103/136): total (108/148) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.18e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.13e-01 | ||||||||||
Only 100 of 274 total aligned reads displayed.
GTTTGGTCAATTCAACAATGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGT > NC_007779/3682471‑3682671 | tGGTCAATTCAACAATGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAgc < 1:2211985/101‑1 (MQ=255) tGGTCAATTCAACAATGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAgc < 1:1511683/101‑1 (MQ=255) ggTCAATTCAACAATGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAgcg < 1:8448041/101‑1 (MQ=255) tCAATTCAACAATGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCt < 1:7749099/101‑1 (MQ=255) cAATTCAACAATGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCtt < 1:6045747/101‑1 (MQ=255) aaTTCAACAATGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTc > 1:10028339/1‑101 (MQ=255) aaTTCAACAATGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTc < 1:4164900/101‑1 (MQ=255) ttCAACAATGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCgg < 1:8067572/101‑1 (MQ=255) aacaaTGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCa > 1:11793589/1‑101 (MQ=255) acaaTGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAg < 1:1858560/101‑1 (MQ=255) caaTGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAgg > 1:6354585/1‑101 (MQ=255) aTGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCa > 1:11341018/1‑101 (MQ=255) aTGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCa < 1:1207025/101‑1 (MQ=255) aTGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCa < 1:6988876/101‑1 (MQ=255) aTGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCAACAGGCCCAGCGCTTCGGTCAGGCa < 1:1966278/101‑1 (MQ=255) aTGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGCGTGCGACAGGCCCAGCGCTTCGGTCAGGCa > 1:6141757/1‑101 (MQ=255) gCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGt > 1:10870197/1‑101 (MQ=255) cGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGtt > 1:2304253/1‑101 (MQ=255) tttACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCGGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGAAGTTCa < 1:12542414/101‑1 (MQ=255) tttACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCa < 1:2801608/101‑1 (MQ=255) ttACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCAt < 1:10363308/101‑1 (MQ=255) ttACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCAt > 1:2341605/1‑101 (MQ=255) tACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCAtt < 1:7470978/101‑1 (MQ=255) aCCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTg < 1:14150638/101‑1 (MQ=255) ccAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGa > 1:12971858/1‑101 (MQ=255) cAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAg > 1:7322530/1‑101 (MQ=255) aGCATTAAGGGACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGt > 1:4432025/1‑101 (MQ=255) gCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGtt > 1:12919436/1‑101 (MQ=255) gCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGtt < 1:13796007/101‑1 (MQ=255) cATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTa > 1:11661939/1‑101 (MQ=255) aTTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAg < 1:4524711/101‑1 (MQ=255) ttAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGc > 1:4789595/1‑101 (MQ=255) ttAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGc < 1:8346585/101‑1 (MQ=255) tAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCg > 1:7664585/1‑101 (MQ=255) aaGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCgg > 1:5998188/1‑101 (MQ=255) aaGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCgg < 1:118578/101‑1 (MQ=255) aGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGt < 1:12315611/101‑1 (MQ=255) ggAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTa > 1:9728727/1‑101 (MQ=255) gAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTaa < 1:9597938/101‑1 (MQ=255) gAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTaa < 1:13289034/101‑1 (MQ=255) aaCAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGATCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTaaa < 1:3155764/101‑1 (MQ=255) aaCAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTaaa < 1:13586003/101‑1 (MQ=255) aaCAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTaaa > 1:10909497/1‑101 (MQ=255) aCAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAAc < 1:7542483/101‑1 (MQ=255) cAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACa > 1:13633494/1‑101 (MQ=255) aGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACAt > 1:12162328/1‑101 (MQ=255) tgctTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATccc > 1:13471247/1‑101 (MQ=255) gctTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCg > 1:13397859/1‑101 (MQ=255) ttACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGa > 1:11283031/1‑101 (MQ=255) tCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGa < 1:10735613/101‑1 (MQ=255) ggCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAAc > 1:4323090/1‑101 (MQ=255) gCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAAcc < 1:305784/101‑1 (MQ=255) gCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAAcc < 1:181460/101‑1 (MQ=255) gCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAAcc < 1:13985975/101‑1 (MQ=255) cGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCg > 1:797399/1‑101 (MQ=255) cGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCg < 1:11173903/101‑1 (MQ=255) cGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCg < 1:1274515/101‑1 (MQ=255) gTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGc < 1:9031916/101‑1 (MQ=255) tGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCa < 1:6856979/101‑1 (MQ=255) gggTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAg < 1:3638412/101‑1 (MQ=255) gggTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAg > 1:11463272/1‑101 (MQ=255) ggTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAgg < 1:6651132/101‑1 (MQ=255) gatGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGt < 1:12099261/99‑1 (MQ=255) tGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCg < 1:11715377/101‑1 (MQ=255) tGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCg < 1:7080092/101‑1 (MQ=255) tGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCg < 1:5511683/101‑1 (MQ=255) tGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCg < 1:6706324/101‑1 (MQ=255) cagcagCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGac > 1:10186866/1‑101 (MQ=255) cgtagaaccattGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCAcg < 1:13909628/91‑1 (MQ=255) cagcGAGCCGTTGCCCGGCTGTGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACAcg < 1:9828875/101‑1 (MQ=255) agcGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACAcgc < 1:9188151/101‑1 (MQ=255) gcGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACAcgcg > 1:13187085/1‑101 (MQ=255) agaaccattGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCAcgccg > 1:9550953/8‑99 (MQ=255) agaaccattGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCAcgccg < 1:8586262/94‑3 (MQ=255) gaaccattGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGa < 1:11057559/95‑1 (MQ=255) gaaccattGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGa < 1:5412079/95‑1 (MQ=255) aaccattGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGag < 1:5277942/96‑2 (MQ=255) ttGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTc > 1:1918994/1‑101 (MQ=255) ttGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGAGCGCTc < 1:3506047/101‑1 (MQ=255) tGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCa > 1:14226480/1‑101 (MQ=255) gCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCaa < 1:14114053/101‑1 (MQ=255) cccGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAAc > 1:10431726/1‑101 (MQ=255) cccGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAAc < 1:9278145/101‑1 (MQ=255) cccGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGAGCGCTcgat < 1:3580336/101‑4 (MQ=255) ccGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAAcc > 1:3338612/1‑101 (MQ=255) cGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGACCCGCAGGTCGGACACGCGGAACGTTCAACCt < 1:12580299/101‑1 (MQ=255) cGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCGGGTCGGACACGCGGAACGTTCAACCt < 1:8204696/101‑1 (MQ=255) cGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCt > 1:389368/1‑101 (MQ=255) tccgatctcAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTg < 1:5004567/93‑1 (MQ=255) ggCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCATGAACCGCAGGTCGGACACGCGGAACGTTCAACCTg < 1:7142653/101‑1 (MQ=255) ggCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTg > 1:5143739/1‑101 (MQ=255) gCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGa > 1:5607520/1‑101 (MQ=255) gACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGct < 1:10811840/101‑1 (MQ=255) aCAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGctc > 1:6223213/1‑101 (MQ=255) aGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTg < 1:5952075/101‑1 (MQ=255) ggCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTgg < 1:82767/101‑1 (MQ=255) ggCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTgg > 1:10539867/1‑101 (MQ=255) ggCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTgg < 1:2536188/101‑1 (MQ=255) gCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTggg > 1:4875983/1‑101 (MQ=255) ccAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAg > 1:10669086/1‑101 (MQ=255) | GTTTGGTCAATTCAACAATGCGTTTACCAGCATTAAGGAACAGCTGCTTACGGTCGGCGTGGGTTGCCAGCAGCGAGCCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGT > NC_007779/3682471‑3682671 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |