| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,682,646 | A→G | 2.9% | R186R (CGT→CGC) | ilvD ← | dihydroxyacid dehydratase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,682,646 | 0 | A→G | 2.9% | 10.2 ‑0.8 ‑0.3 | 243 | R186R (CGT→CGC) | ilvD | dihydroxyacid dehydratase |
| Reads supporting (aligned to +/- strand): new base (2/5): ref base (111/125): total (113/130) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.54e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.19e-01 | ||||||||||
Only 100 of 249 total aligned reads displayed.
CCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGATGATCTGATCGGAAAGTTTGG > NC_007779/3682548‑3682746 | ccattGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGAGCg > 1:5504253/4‑101 (MQ=255) cGTTGGCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGt < 1:2858818/101‑1 (MQ=255) ttGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTc < 1:5980712/101‑1 (MQ=255) ttGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTc > 1:1918994/1‑101 (MQ=255) ttGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTc < 1:8239791/101‑1 (MQ=255) ttGCCCGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGAGCGCTc < 1:3506047/101‑1 (MQ=255) tGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCa > 1:14226480/1‑101 (MQ=255) gCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCaa > 1:625273/1‑101 (MQ=255) cccGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAAc > 1:5207937/1‑101 (MQ=255) cccGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAAc > 1:3950450/1‑101 (MQ=255) cccGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGAGCGCTcgat < 1:3580336/101‑4 (MQ=255) ccGGCAGGGACAGGCCGAGGGCCTCGGTCAGGCAGTTCATCGAGTTTGCGGTGAACATACCCGAGCAAGAACCACAGGTCGGGCACGCCGAGCGCTcgatg < 1:1072304/101‑5 (MQ=255) cGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGACCCGCAGGTCGGACACGCGGAACGTTCAACCt < 1:12580299/101‑1 (MQ=255) ggCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCATGAACCGCAGGTCGGACACGCGGAACGTTCAACCTg < 1:7142653/101‑1 (MQ=255) gCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGa > 1:5607520/1‑101 (MQ=255) aCAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGctc > 1:5795290/1‑101 (MQ=255) aCAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGctc > 1:12906107/1‑101 (MQ=255) cAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGctct < 1:1902444/101‑1 (MQ=255) cAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGctct > 1:4162675/1‑101 (MQ=255) ggCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTgg > 1:10539867/1‑101 (MQ=255) ccAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAg < 1:12440221/101‑1 (MQ=255) ccAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAg > 1:1359513/1‑101 (MQ=255) gcgcTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCa < 1:11284927/101‑1 (MQ=255) cgcTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAg > 1:4361274/1‑101 (MQ=255) cgcTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAg < 1:10548444/101‑1 (MQ=255) gcTTCGGTCAGGCAGTTCATTGAGTTATCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGa > 1:4624880/1‑101 (MQ=255) gcTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGa > 1:2613267/1‑101 (MQ=255) tCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATAc > 1:3706286/1‑101 (MQ=255) cGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACt < 1:10642424/101‑1 (MQ=255) cGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACt > 1:4792835/1‑101 (MQ=255) cGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACt > 1:5748656/1‑101 (MQ=255) ggTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACtt < 1:6681669/101‑1 (MQ=255) ggTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACtt < 1:10355225/101‑1 (MQ=255) gTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACttt > 1:297670/1‑101 (MQ=255) gTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACttt < 1:12798388/101‑1 (MQ=255) tCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTc < 1:82701/101‑1 (MQ=255) aGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCgg < 1:3209393/101‑1 (MQ=255) gCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGt < 1:4060276/101‑1 (MQ=255) cAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTc > 1:10838317/1‑101 (MQ=255) aGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCt < 1:2412580/101‑1 (MQ=255) aGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCt < 1:4445985/101‑1 (MQ=255) aGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCt < 1:3329163/101‑1 (MQ=255) aGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCt > 1:11126134/1‑101 (MQ=255) gTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACG‑GGAACGTTCAACCTGATCGCTCTGGGGGTCAGATACTTTCGGGGCttc > 1:12209349/1‑99 (MQ=255) ttCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTgc < 1:12018170/101‑1 (MQ=255) tCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTgcg < 1:1522332/101‑1 (MQ=255) tCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTgcg > 1:593880/1‑101 (MQ=255) tGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCt < 1:2020552/101‑1 (MQ=255) tGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCt > 1:13694439/1‑101 (MQ=255) gAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTg < 1:1631766/101‑1 (MQ=255) gAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTg > 1:14044243/1‑101 (MQ=255) gAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTg < 1:6811051/101‑1 (MQ=255) gAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTg > 1:8795925/1‑101 (MQ=255) gTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGa < 1:10427054/101‑1 (MQ=255) ttAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGat < 1:7838/101‑1 (MQ=255) tAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGatc < 1:13524465/101‑1 (MQ=255) tAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTACAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGatc < 1:7264879/101‑1 (MQ=255) aGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGatca > 1:1410992/1‑101 (MQ=255) aGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGatca > 1:7633549/1‑101 (MQ=255) aGCGCTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGatca > 1:10978760/1‑101 (MQ=255) cGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGatcatc > 1:8743732/1‑101 (MQ=255) ggTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCg > 1:9739779/1‑101 (MQ=255) gctAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCg < 1:11805685/99‑1 (MQ=255) gTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGc < 1:5357081/101‑1 (MQ=255) aaaCATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCAt > 1:6372089/1‑101 (MQ=255) aaCATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATc > 1:953302/1‑101 (MQ=255) aTCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCGAGGAGTGAGATACTTTCGGGTCTGCGCCCTGGCTCATCGCATCAAc > 1:11649466/1‑101 (MQ=255) tCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAAcc > 1:3871208/1‑101 (MQ=255) ccGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAg < 1:13168650/101‑1 (MQ=255) ccGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAg > 1:1553917/1‑101 (MQ=255) ggAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGAt > 1:8533862/1‑101 (MQ=255) gAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATc > 1:5515660/1‑101 (MQ=255) gAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATc > 1:8057869/1‑101 (MQ=255) aGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCg < 1:5134995/101‑1 (MQ=255) aGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCg < 1:5056522/101‑1 (MQ=255) cAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAg > 1:2201547/1‑101 (MQ=255) cAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAg > 1:8939365/1‑101 (MQ=255) cAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAg > 1:12633670/1‑101 (MQ=255) ggAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCt > 1:9112496/1‑101 (MQ=255) gAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCtt < 1:13276093/101‑1 (MQ=255) aaCCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTtg < 1:7917433/101‑1 (MQ=255) ccGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTtgat < 1:6208630/101‑1 (MQ=255) aGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGAtgatc > 1:926311/1‑101 (MQ=255) ggTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGAtgatct < 1:9067401/101‑1 (MQ=255) cGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGAtgatctgat < 1:9546240/101‑1 (MQ=255) ggACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGAtgatctgatc > 1:10109617/1‑101 (MQ=255) ggACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGAtgatctgatc > 1:6060332/1‑101 (MQ=255) acacGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGATGATCTGATCgg < 1:7373126/101‑1 (MQ=255) cgcgGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCTGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGATGATCTGATCGGaaa > 1:9428508/1‑101 (MQ=255) cgcgGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGATGATCTGATCGGaaa < 1:9613494/101‑1 (MQ=255) cgcgGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGATGATCTGATCGGaaa < 1:6548425/101‑1 (MQ=255) cgcgGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGATGATCTGATCGGaaa < 1:13774139/101‑1 (MQ=255) gcgGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGATGATCTGATCGGAAAg > 1:4941498/1‑101 (MQ=255) cgGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGATGATCTGATCGGAAAGt > 1:13946168/1‑101 (MQ=255) cgGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGATGATCTGATCGGAAAGt < 1:9330540/101‑1 (MQ=255) cgGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGATGATCTGATCGGAAAGt < 1:8509778/101‑1 (MQ=255) ggAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGATGATCTGATCGGAAAGtt < 1:13481592/101‑1 (MQ=255) ggAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGATGATCTGATCGGAAAGtt > 1:7707522/1‑101 (MQ=255) gAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGATGATCTGATCGGAAAGttt > 1:11708765/1‑101 (MQ=255) aaCGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGATGATCTGATCGGAAAGTTTg < 1:4563709/101‑1 (MQ=255) | CCGTTGCCCGGCTGCGACAGGCCCAGCGCTTCGGTCAGGCAGTTCATTGAGTTAGCGGTAAACATCCCGGAGCAGGAACCGCAGGTCGGACACGCGGAACGTTCAACCTGATCGCTCTGGGAGTCAGATACTTTCGGGTCTGCGCCCTGGATCATCGCATCAACCAGATCGAGCTTGATGATCTGATCGGAAAGTTTGG > NC_007779/3682548‑3682746 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |