| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,690,692 | C→T | 13.8% | noncoding (2286/2904 nt) | rrlC ← | 23S ribosomal RNA |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,690,692 | 0 | C→T | 13.8% | 25.2 ‑1.1 ‑0.0 | 87 | noncoding (2286/2904 nt) | rrlC | 23S ribosomal RNA |
| Reads supporting (aligned to +/- strand): new base (3/9): ref base (32/43): total (35/52) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.47e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.43e-01 | ||||||||||
TGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAAC > NC_007779/3690667‑3690792 | tGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATc < 1:10603409/101‑1 (MQ=11)tGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATc < 1:11351805/101‑1 (MQ=11) tgccaaCCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACTCTTTGGGAGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCTAACTCGGATCa > 1:624377/6‑101 (MQ=2) gTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCa < 1:7788057/101‑1 (MQ=31) gTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCACCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCa > 1:698724/1‑101 (MQ=14) tCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCAc < 1:5899676/101‑1 (MQ=32) tCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCAc < 1:605973/101‑1 (MQ=32) tCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCAc < 1:551568/101‑1 (MQ=32) tCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCAc > 1:10701177/1‑101 (MQ=32) tCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCAc < 1:12263441/101‑1 (MQ=32) tCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCAc < 1:13197022/101‑1 (MQ=32) tCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCAc < 1:11761384/101‑1 (MQ=32) tCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCAc < 1:12692953/101‑1 (MQ=32) gccaaCCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACTCTTTGGGAGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCTAACCCGGATCAc < 1:4801809/97‑1 (MQ=2) gccaaCCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACTCTTTGGGAGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCTAACCCGGATCAc < 1:11083907/97‑1 (MQ=2) gccaaCCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACTCTTTGGGAGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCTAACCCGGATCAc < 1:14284747/97‑1 (MQ=2) gccaaCCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACTCTTTGGGAGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCTAACCCGGATCAc < 1:2875789/97‑1 (MQ=2) ccGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACGCTGTCCGCAACCCGGATCACg > 1:12230546/1‑101 (MQ=17) ccGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACg < 1:13814883/101‑1 (MQ=32) ccGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACg < 1:275279/101‑1 (MQ=32) caaCCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACTCTTTGGGAGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCTAACCCGGATCACgg > 1:4760728/3‑101 (MQ=2) cGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACgg > 1:11600471/1‑101 (MQ=32) cGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACgg > 1:7428972/1‑101 (MQ=32) gACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACggg < 1:623883/101‑1 (MQ=32) gACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACggg < 1:14184396/101‑1 (MQ=32) aaCCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACTCTTTGGGAGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCTAACCCGGATCACggg < 1:2132112/100‑1 (MQ=2) aaCCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACTCTTTGGGAGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCTAACCCGGATCACggg < 1:11392411/100‑1 (MQ=2) aaCCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACTCTTTGGGAGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCTAACCCGGATCACggg < 1:11282016/100‑1 (MQ=2) aaCCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACTCTTTGGGAGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCTAACCCGGATCACggg < 1:4993576/100‑1 (MQ=2) aaCCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACTCTTTGGGAGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCTAACCCGGATCACggg < 1:9429745/100‑1 (MQ=2) aCCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGt < 1:11468777/101‑1 (MQ=32) ccAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACggggc > 1:9625322/1‑99 (MQ=17) ccAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTc > 1:2580015/1‑101 (MQ=32) cAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTcc < 1:9055766/101‑1 (MQ=33) cAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGACCGCAACCCGGATCACGGGTcc > 1:5672622/1‑101 (MQ=18) aGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTccc > 1:6736287/1‑100 (MQ=18) aGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCa < 1:1977420/101‑1 (MQ=34) ggATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCAc < 1:24118/101‑1 (MQ=35) ggATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCAc < 1:13247630/101‑1 (MQ=35) ggATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCAc > 1:9909284/1‑101 (MQ=35) ggATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCAc < 1:11669485/101‑1 (MQ=35) ggATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCAc < 1:11484198/101‑1 (MQ=35) ggATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCAc < 1:10806971/101‑1 (MQ=35) gATTAGCCACCCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTCCCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACg < 1:11321058/101‑1 (MQ=255) gATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACg > 1:4534304/1‑101 (MQ=35) aTTAGCCAACCTTCGTGCTCCTCCGTTCCTCTTTAGGAGGAGACCGCCCCAGTCAAACTTCCCCCCAGACACTGTCCGCAACCCGGATCACGGGTCCACGt < 1:2697860/101‑1 (MQ=255) aTTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGt > 1:13494670/1‑101 (MQ=35) aTTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGt < 1:8916525/101‑1 (MQ=35) aTTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGt > 1:11242962/1‑101 (MQ=35) aTTAGCCAACCTTCGTGCTCCTCCGTTACTCTTGAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGt < 1:7643929/101‑1 (MQ=25) ttAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGtt < 1:11483906/101‑1 (MQ=37) tgagggaaCCTTTGGGCGCCTCCGTTACTCTTTGGGAGGCAACCGCCCCAGTTAAACTACCCACCACGCACTGTCCCTAACCCGGACCACGGCCCCAGGtt > 1:3560106/7‑101 (MQ=2) tAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGGCCGACCCAGTCAAACTACCCACCAGACACTATCTGCAACCCGGATCACGGGACCACGTTa > 1:13813698/1‑101 (MQ=11) tAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTa < 1:3182578/101‑1 (MQ=35) tAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTa > 1:2087600/1‑101 (MQ=35) tAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTa > 1:4334454/1‑101 (MQ=35) gCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGa < 1:5451100/101‑1 (MQ=37) gCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGa < 1:10030795/101‑1 (MQ=37) gCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGa > 1:13593/1‑101 (MQ=35) ccAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGaa < 1:10159659/101‑1 (MQ=37) ccAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGaa > 1:10748849/1‑101 (MQ=35) ccAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGaa > 1:11590181/1‑101 (MQ=35) ccAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGaa < 1:11841460/101‑1 (MQ=35) ccAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGaa < 1:8079234/101‑1 (MQ=37) ccAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGaa < 1:7874073/101‑1 (MQ=35) ccAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGaa > 1:6193739/1‑101 (MQ=35) cAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAAc < 1:5190063/101‑1 (MQ=35) cAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAAc < 1:8674723/101‑1 (MQ=37) cAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAAc > 1:7899105/1‑101 (MQ=35) cAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAAc < 1:12812611/101‑1 (MQ=37) cAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAAc > 1:13301946/1‑101 (MQ=35) aaCCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACa > 1:14035885/1‑101 (MQ=35) aaCCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACa > 1:4326087/1‑101 (MQ=35) aaCCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACa > 1:2875458/1‑101 (MQ=35) aaCCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACa > 1:3652769/1‑101 (MQ=35) aCCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACAt < 1:12776279/101‑1 (MQ=37) aCCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACAt < 1:11974329/101‑1 (MQ=37) aCCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACAt > 1:2881165/1‑101 (MQ=35) ccTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATc > 1:13045590/1‑101 (MQ=35) ccTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATc > 1:12104119/1‑101 (MQ=35) ccTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATc < 1:902233/101‑1 (MQ=38) cTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCa < 1:7763592/101‑1 (MQ=37) cTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCa > 1:4886280/1‑101 (MQ=35) ttCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCaa < 1:13365226/101‑1 (MQ=38) ttCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCaa > 1:7391111/1‑101 (MQ=35) tCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCaaa > 1:9998156/1‑101 (MQ=35) tCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCaaa < 1:5149445/101‑1 (MQ=38) tCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCaaa < 1:5807047/101‑1 (MQ=35) cGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAAc > 1:1855895/1‑101 (MQ=35) cGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAAc < 1:397650/101‑1 (MQ=35) cGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAAc < 1:6937137/101‑1 (MQ=35) | TGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAAC > NC_007779/3690667‑3690792 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |