| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,690,713 | A→G | 8.4% | noncoding (2265/2904 nt) | rrlC ← | 23S ribosomal RNA |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,690,713 | 0 | A→G | 8.4% | 25.4 ‑1.0 ‑0.2 | 143 | noncoding (2265/2904 nt) | rrlC | 23S ribosomal RNA |
| Reads supporting (aligned to +/- strand): new base (3/9): ref base (54/77): total (57/86) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.63e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.22e-01 | ||||||||||
Only 100 of 148 total aligned reads displayed.
TGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAG > NC_007779/3690667‑3690813 | tGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATc < 1:11351805/101‑1 (MQ=11)tGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATc < 1:10603409/101‑1 (MQ=11) gTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCa < 1:7788057/101‑1 (MQ=31) gTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCACCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCa > 1:698724/1‑101 (MQ=14) tCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCAc < 1:605973/101‑1 (MQ=32) tCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCAc < 1:12263441/101‑1 (MQ=32) tCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCAc < 1:551568/101‑1 (MQ=32) tCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCAc < 1:11761384/101‑1 (MQ=32) tCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCAc < 1:13197022/101‑1 (MQ=32) tCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCAc < 1:5899676/101‑1 (MQ=32) gccaaCCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACTCTTTGGGAGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCTAACCCGGATCAc < 1:11083907/97‑1 (MQ=2) gccaaCCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACTCTTTGGGAGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCTAACCCGGATCAc < 1:14284747/97‑1 (MQ=2) gccaaCCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACTCTTTGGGAGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCTAACCCGGATCAc < 1:2875789/97‑1 (MQ=2) caaCCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACTCTTTGGGAGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCTAACCCGGATCACgg > 1:4760728/3‑101 (MQ=2) cGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACgg > 1:11600471/1‑101 (MQ=32) gACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACggg < 1:623883/101‑1 (MQ=32) aaCCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACTCTTTGGGAGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCTAACCCGGATCACggg < 1:2132112/100‑1 (MQ=2) aaCCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACTCTTTGGGAGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCTAACCCGGATCACggg < 1:9429745/100‑1 (MQ=2) aCCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGt < 1:11468777/101‑1 (MQ=32) ccAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACggggc > 1:9625322/1‑99 (MQ=17) cAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTcc < 1:9055766/101‑1 (MQ=33) cAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGACCGCAACCCGGATCACGGGTcc > 1:5672622/1‑101 (MQ=18) aGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTccc > 1:6736287/1‑100 (MQ=18) aGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCa < 1:1977420/101‑1 (MQ=34) ggATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCAc < 1:13247630/101‑1 (MQ=35) ggATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCAc < 1:11669485/101‑1 (MQ=35) ggATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCAc < 1:10806971/101‑1 (MQ=35) ggATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCAc > 1:9909284/1‑101 (MQ=35) gATTAGCCACCCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTCCCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACg < 1:11321058/101‑1 (MQ=255) gATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACg > 1:4534304/1‑101 (MQ=35) aTTAGCCAACCTTCGTGCTCCTCCGTTCCTCTTTAGGAGGAGACCGCCCCAGTCAAACTTCCCCCCAGACACTGTCCGCAACCCGGATCACGGGTCCACGt < 1:2697860/101‑1 (MQ=255) aTTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGt > 1:11242962/1‑101 (MQ=35) aTTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGt > 1:13494670/1‑101 (MQ=35) aTTAGCCAACCTTCGTGCTCCTCCGTTACTCTTGAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGt < 1:7643929/101‑1 (MQ=25) ttAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGtt < 1:11483906/101‑1 (MQ=37) tAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGGCCGACCCAGTCAAACTACCCACCAGACACTATCTGCAACCCGGATCACGGGACCACGTTa > 1:13813698/1‑101 (MQ=11) tAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTa > 1:4334454/1‑101 (MQ=35) tAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTa < 1:3182578/101‑1 (MQ=35) gCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGa > 1:13593/1‑101 (MQ=35) gCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGa < 1:5451100/101‑1 (MQ=37) gCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGa < 1:10030795/101‑1 (MQ=37) ccAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGaa > 1:6193739/1‑101 (MQ=35) ccAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGaa < 1:7874073/101‑1 (MQ=35) ccAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGaa < 1:8079234/101‑1 (MQ=37) ccAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGaa > 1:11590181/1‑101 (MQ=35) ccAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGaa > 1:10748849/1‑101 (MQ=35) ccAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGaa < 1:10159659/101‑1 (MQ=37) cAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAAc > 1:13301946/1‑101 (MQ=35) cAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAAc < 1:12812611/101‑1 (MQ=37) cAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAAc > 1:7899105/1‑101 (MQ=35) cAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAAc < 1:8674723/101‑1 (MQ=37) aaCCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACa > 1:4326087/1‑101 (MQ=35) aaCCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACa > 1:3652769/1‑101 (MQ=35) aaCCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACa > 1:2875458/1‑101 (MQ=35) aaCCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACa > 1:14035885/1‑101 (MQ=35) aCCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACAt > 1:2881165/1‑101 (MQ=35) aCCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACAt < 1:11974329/101‑1 (MQ=37) aCCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACAt < 1:12776279/101‑1 (MQ=37) ccTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATc > 1:12104119/1‑101 (MQ=35) ccTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATc < 1:902233/101‑1 (MQ=38) cTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCa > 1:4886280/1‑101 (MQ=35) ttCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCaa > 1:7391111/1‑101 (MQ=35) tCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCaaa < 1:5149445/101‑1 (MQ=38) cGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAAc > 1:1855895/1‑101 (MQ=35) cGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAAc < 1:397650/101‑1 (MQ=35) gTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACa < 1:12138271/101‑1 (MQ=38) gTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACa < 1:9172778/101‑1 (MQ=38) tGCTCCTCCGTTACTCTTTAGGAGGAGGCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACAt < 1:507380/101‑1 (MQ=37) tGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACAt < 1:1313409/101‑1 (MQ=35) tGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACAt < 1:6427863/101‑1 (MQ=37) tGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACAt < 1:14324521/101‑1 (MQ=35) tcctccGTTTCTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTaa < 1:10315056/101‑1 (MQ=25) tcctccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTaa < 1:4806705/101‑1 (MQ=38) tcctccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTaa < 1:2275095/101‑1 (MQ=37) tcctccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTaa < 1:13708530/101‑1 (MQ=38) cctccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTGCCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTaaa < 1:3394639/101‑1 (MQ=25) cctccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTaaa > 1:7619067/1‑101 (MQ=35) cctccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTaaa > 1:3518477/1‑101 (MQ=35) cctccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTaaa > 1:5774311/1‑101 (MQ=35) cctccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTaaa > 1:3479038/1‑101 (MQ=35) cctccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTaaa < 1:11926115/101‑1 (MQ=35) tccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTAAAgg > 1:2659798/1‑101 (MQ=35) tccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTAAAgg > 1:7286301/1‑101 (MQ=35) cGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTAAAGggt < 1:6946964/101‑1 (MQ=37) cGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTAAAGggt < 1:2053202/101‑1 (MQ=35) cGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTAAAGggt > 1:5307556/1‑101 (MQ=35) gTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTAAAGggtg > 1:12555810/1‑101 (MQ=35) gTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTAAAGggtg < 1:10238713/101‑1 (MQ=38) gTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTAAAGggtg < 1:4847172/101‑1 (MQ=38) ttACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTAAAGggtgg > 1:12861085/1‑101 (MQ=35) ttACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTAAAGggtgg > 1:8819242/1‑101 (MQ=35) ttACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACAGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTAAAGggtgg > 1:5581237/1‑101 (MQ=25) tACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTAAAGggtggt > 1:4940399/1‑101 (MQ=35) aCTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTAAAGGGTGGTa < 1:10021071/101‑1 (MQ=35) aCTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTAAAGGGTGGTa > 1:2440240/1‑101 (MQ=35) tctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTAAAGGGTGGTAtt > 1:13870298/1‑101 (MQ=35) ctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTAAAGGGTGGTAttt > 1:1050228/1‑101 (MQ=35) ttAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTAAAGGGTGGTATTTCa < 1:1994992/101‑1 (MQ=35) ttAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTAAAGGGTGGTATTTCa < 1:2573595/101‑1 (MQ=35) tAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTAAAGGGTGGTATTTCaa > 1:605285/1‑101 (MQ=35) | TGTCCGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAG > NC_007779/3690667‑3690813 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |