| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 4,051,642 | C→G | 3.8% | S136S (TCC→TCG) | ugpC → | glycerol‑3‑phosphate transporter subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 4,051,642 | 0 | C→G | 3.8% | 15.8 0.0 ‑0.0 | 236 | S136S (TCC→TCG) | ugpC | glycerol‑3‑phosphate transporter subunit |
| Reads supporting (aligned to +/- strand): new base (5/4): ref base (132/95): total (137/99) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.92e-01 | ||||||||||
Only 100 of 261 total aligned reads displayed.
TTCGCGGCATGGGCAAGCAGCAAATTGCCGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGCTCTCTAACCTCGATGCCAAGCTGC > NC_007779/4051542‑4051742 | ttCGCGGCATGGGCAAGCAGCAAATTGCCGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTcc > 1:8187437/1‑101 (MQ=255)ttCGCGGCATGGGCAAGCAGCAAATTGCCGAGCGCGTTAAAGAAGCGGCGCGCATTCCGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTcc < 1:4260208/101‑1 (MQ=255) tCGCGGCATGGGCAAGCAGCAAATTGCCGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCcg < 1:2089417/101‑1 (MQ=255) gcgGCATGGGCAAGCAGCAAATTGCCGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCcggc < 1:319737/101‑1 (MQ=255) gcgGCATGGGCAAGCAGCAAATTGCCGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCcggc < 1:258961/101‑1 (MQ=255) gcgGCATGGGCAAGCAGCAAATTGCCGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCcggc > 1:11282879/1‑101 (MQ=255) ggCATGGGCAAGCAGCAAATTGCCGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCcggcgg > 1:2173691/1‑101 (MQ=255) gCATGGGCAAGCAGCAAATTGCCGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGNGCTGGACGGTCNGCTCAAACGTCGCCCGCGCGAGCNTTCCGGCGGt > 1:12590892/1‑101 (MQ=255) gCATGGGCAAGCAGCAAATTGCCGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGt > 1:12386619/1‑101 (MQ=255) gCATGGGCAAGCAGCAAATTGCCGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGt < 1:7297433/101‑1 (MQ=255) cATGGGCAAGCAGCAAATTGCCGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTc > 1:9451379/1‑101 (MQ=255) cATGGGCAAGCAGCAAATTGCCGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTc < 1:77297/101‑1 (MQ=255) cAAGCAGCAAATTGCCGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGcc > 1:7903179/1‑101 (MQ=255) aaGCAGCAAATTGCCGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCa < 1:12928940/101‑1 (MQ=255) agcagcAAATTGCCGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAg > 1:10735075/1‑101 (MQ=255) agcagcAAATTGCCGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAg < 1:130293/101‑1 (MQ=255) gcaAATTGCCGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCgtg < 1:6456064/101‑1 (MQ=255) gcaAATTGCCGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGGCAGCGCCAGCgtg > 1:3610352/1‑101 (MQ=255) aaaTTGCCGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGtgtg < 1:11863675/101‑1 (MQ=255) aaaTTGCCGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGtgtg < 1:1877894/101‑1 (MQ=255) aaaTTGCCGAGCGCGTTAAAGAAGAGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGtgtg < 1:2732048/101‑1 (MQ=255) ccGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATg > 1:12294111/1‑101 (MQ=255) ccGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATg < 1:4320525/101‑1 (MQ=255) cGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATgg > 1:671308/1‑101 (MQ=255) cGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATgg < 1:685402/101‑1 (MQ=255) cGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATgg < 1:9842095/101‑1 (MQ=255) cGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATgg > 1:11072793/1‑101 (MQ=255) cGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATgg > 1:11462228/1‑101 (MQ=255) gAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATggg < 1:928437/101‑1 (MQ=255) gAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATggg > 1:12711722/1‑101 (MQ=255) aGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGc > 1:13108840/1‑101 (MQ=255) aGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGc < 1:6331208/101‑1 (MQ=255) aGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGc < 1:866332/101‑1 (MQ=255) gcgcGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGcc < 1:12580959/101‑1 (MQ=255) cgcgTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCcg > 1:5825945/1‑101 (MQ=255) gcgTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCcgc < 1:554400/101‑1 (MQ=255) cgTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCcgcg < 1:6001253/101‑1 (MQ=255) ttAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCcgcgcg < 1:3054074/101‑1 (MQ=255) ttAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCcgcgcg < 1:7263700/101‑1 (MQ=255) aaaGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGAt > 1:416761/1‑101 (MQ=255) cggcgCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTgcgc > 1:1942131/1‑101 (MQ=255) cggcgCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTgcgc < 1:626137/101‑1 (MQ=255) ggcgCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGCTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGcgcg > 1:10168974/1‑101 (MQ=255) gcgcgcATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGTGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGa > 1:4915770/1‑101 (MQ=255) cgcgcATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGAt < 1:4443921/101‑1 (MQ=255) gcgcATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATc > 1:6759286/1‑101 (MQ=255) cgcATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATcc > 1:9461167/1‑101 (MQ=255) gcATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCcg < 1:9547620/101‑1 (MQ=255) cATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCcgg > 1:3858958/1‑101 (MQ=255) cATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCcgg < 1:4837711/101‑1 (MQ=255) aTTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCcggc > 1:1119914/1‑101 (MQ=255) tCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCcggcgg > 1:8041536/1‑101 (MQ=255) tCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCcggcgg < 1:13414636/101‑1 (MQ=255) tGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGgtg < 1:547516/101‑1 (MQ=255) tGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGgtg > 1:3351589/1‑101 (MQ=255) ggAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGgtgt > 1:1067783/1‑101 (MQ=255) ggAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGgtgt < 1:14305823/101‑1 (MQ=255) aGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTc > 1:641581/1‑101 (MQ=255) gCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTcc > 1:5369401/1‑101 (MQ=255) cTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCt > 1:8378761/1‑101 (MQ=255) tGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTg < 1:2354807/101‑1 (MQ=255) ggACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGt < 1:8289934/101‑1 (MQ=255) gACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGtt > 1:13236218/1‑101 (MQ=255) ggTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTtga < 1:7520787/101‑1 (MQ=255) ggTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTtga > 1:6602652/1‑101 (MQ=255) gTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTtgat < 1:11488430/101‑1 (MQ=255) gTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTtgat > 1:347185/1‑101 (MQ=255) tCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTtgatg < 1:1169459/101‑1 (MQ=255) cTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTtgatga > 1:2937546/1‑101 (MQ=255) tGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAg < 1:11905800/101‑1 (MQ=255) tGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAg > 1:7657746/1‑101 (MQ=255) tGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTACTGTTTGATGAg < 1:9237922/101‑1 (MQ=255) gCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGc > 1:5942846/1‑101 (MQ=255) tCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCg > 1:3589503/1‑101 (MQ=255) aaaCGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGct > 1:2467870/1‑101 (MQ=255) aaaCGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGct > 1:11360512/1‑101 (MQ=255) aaaCGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGct > 1:3329064/1‑101 (MQ=255) aaCGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGctc < 1:13670814/101‑1 (MQ=255) cgcaagCCCGCGC‑ATCTCTCGGGTGGTCAGCGTCAGCGCGTGGCGATGGGCCGCGCCATCGTCCGCCGACCGAAGGTCTTCCTCATGGACGAGCCGctctc < 1:8726988/96‑1 (MQ=2) cGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGctctc < 1:14189712/101‑1 (MQ=255) gTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGctctct > 1:13968049/1‑101 (MQ=255) caagCCCGCGC‑ATCTCTCGGGTGGTCAGCGTCAGCGCGTGGCGATGGGCCGCGCCATCGTCCGCCGACCGAAGGTCTTCCTCATGGACGAGCCGctctcaa < 1:13519346/98‑3 (MQ=2) tCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGCTCTCTa > 1:11759660/1‑101 (MQ=255) gCCCGCGC‑ATCTCTCGGGTGGTCAGCGTCAGCGCGTGGCGATGGGCCGCGCCATCGTCCGCCGACCGAAGGTCTTCCTCATGGACGAGCCGCTCTCAAAcc > 1:1543053/1‑101 (MQ=2) cccGCGC‑ATCTCTCGGGTGGTCAGCGTCAGCGCGTGGCGATGGGCCGCGCCATCGTCCGCCGACCGAAGGTCTTCCTCATGGACGAGCCGCTCTCAAACCt < 1:9122707/101‑1 (MQ=2) ccGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGCTCTCTAACCt < 1:9648988/101‑1 (MQ=255) ccGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGCTCTCTAACCt > 1:5761232/1‑101 (MQ=255) gcgcgAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGCTCTCTAACCTCg < 1:3038305/101‑1 (MQ=255) gcgcgAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGCTCTCTAACCTCg > 1:203573/1‑101 (MQ=255) gcgAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGCTCTCTAACCTCGAt > 1:12061077/1‑101 (MQ=255) gcgAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGCTCTCTAACCTCGAt < 1:10469764/101‑1 (MQ=255) cgAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGCTCTCTAACCTCGATg > 1:10093608/1‑101 (MQ=255) gAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGCTCTCTAACCTCGATGc < 1:12166756/101‑1 (MQ=255) aGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGCTCTCTAACCTCGATGcc > 1:4592633/1‑101 (MQ=255) tttCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGCTCTCTAACCTCGATGCCAAg < 1:1712064/101‑1 (MQ=255) tCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGCTCTCTAACCTCGATGCCAAGCt < 1:10967180/101‑1 (MQ=255) tCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGCTCTCTAACCTCGATGCCAAGCt > 1:436798/1‑101 (MQ=255) tCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTACCTGTTTGATGAGCCGCTCTCTAACCTCGATGCCAAGCt > 1:9712520/1‑101 (MQ=255) ccGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGCTCTCTAACCTCGATGCCAAGCTg < 1:6074675/101‑1 (MQ=255) cggcggTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGCTCTCTAACCTCGATGCCAAGCTgc > 1:12866373/1‑101 (MQ=255) | TTCGCGGCATGGGCAAGCAGCAAATTGCCGAGCGCGTTAAAGAAGCGGCGCGCATTCTGGAGCTGGACGGTCTGCTCAAACGTCGCCCGCGCGAGCTTTCCGGCGGTCAGCGCCAGCGTGTGGCGATGGGCCGCGCGATTGTGCGCGATCCGGCGGTGTTCCTGTTTGATGAGCCGCTCTCTAACCTCGATGCCAAGCTGC > NC_007779/4051542‑4051742 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |