| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 224,903 | G→C | 24.1% | noncoding (1133/1542 nt) | rrsH → | 16S ribosomal RNA |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 224,903 | 0 | G→C | 24.1% | 233.0 ‑0.1 ‑0.1 | 281 | noncoding (1133/1542 nt) | rrsH | 16S ribosomal RNA |
| Reads supporting (aligned to +/- strand): new base (38/29): ref base (112/92): total (160/121) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.88e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.25e-01 | ||||||||||
Only 100 of 287 total aligned reads displayed.
GGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAG > NC_007779/224803‑224990 | gAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑g‑g < 1:647435/101‑1 (MQ=37) aaCTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑Gt > 1:13344157/1‑101 (MQ=35) tgtgAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGCAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTccg > 1:1312535/1‑101 (MQ=18) tgtgAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTccg < 1:10461967/101‑1 (MQ=34) tgtgAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTccg > 1:12899017/1‑101 (MQ=33) gagaCAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTccggcc < 1:522069/101‑1 (MQ=33) gagaCAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTccggcc < 1:7361333/101‑1 (MQ=33) gagaCAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTccggcc > 1:5432812/1‑101 (MQ=32) gagaCAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTccggcc > 1:2522381/1‑101 (MQ=32) gagaCAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTccggcc < 1:11356984/101‑1 (MQ=33) cAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGa < 1:8869512/101‑1 (MQ=33) cAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGa < 1:608128/101‑1 (MQ=32) gTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACt > 1:10668583/1‑101 (MQ=32) gTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACt < 1:2569690/101‑1 (MQ=33) ctgcATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCaa < 1:9198170/101‑1 (MQ=33) tgcATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCaaa > 1:6355735/1‑101 (MQ=32) cATGGCTGTTGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAgg < 1:5976203/101‑1 (MQ=17) gCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGAc > 1:14159112/1‑101 (MQ=32) tGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTg > 1:7244659/1‑101 (MQ=32) gtcAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAg > 1:1173947/1‑101 (MQ=32) gtcAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAg > 1:8449163/1‑101 (MQ=32) tcAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGt > 1:1552467/1‑101 (MQ=32) cAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTg > 1:12570194/1‑101 (MQ=32) cAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTg < 1:14047240/101‑1 (MQ=32) aGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGa > 1:9007581/1‑101 (MQ=32) gCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGAt > 1:2862432/1‑101 (MQ=32) gCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGAt > 1:3285884/1‑101 (MQ=32) cTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATa > 1:6785074/1‑101 (MQ=32) cTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATa > 1:2381408/1‑101 (MQ=32) tCGTGTTGTGGAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATaa > 1:10476675/1‑101 (MQ=17) tCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATaa > 1:11480060/1‑101 (MQ=32) gtgtTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAAc < 1:12941789/101‑1 (MQ=32) gttgtGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑g < 1:5502753/101‑1 (MQ=32) ttgtGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑gg < 1:2355435/101‑1 (MQ=32) ttgtGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑gg > 1:4538466/1‑101 (MQ=33) ttgtGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑gg > 1:5644038/1‑101 (MQ=32) ttgtGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑gg < 1:5046771/101‑1 (MQ=32) ttgaGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑gg < 1:10126628/101‑1 (MQ=17) aaaTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGaa > 1:2729407/1‑101 (MQ=33) aaaTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGaa > 1:8642236/1‑101 (MQ=32) aaTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAg < 1:2181329/101‑1 (MQ=32) aTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAgg < 1:5328919/101‑1 (MQ=32) ttGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTgg > 1:176408/1‑101 (MQ=32) ttGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTgg < 1:3991599/101‑1 (MQ=32) gggTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTgggg > 1:10329019/1‑101 (MQ=33) gggTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTgggg < 1:10959057/101‑1 (MQ=32) gggTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTgggg < 1:3085996/101‑1 (MQ=32) gTTAAGTCCCGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGC‑ACGTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGa > 1:10790841/1‑101 (MQ=2) gTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGAt < 1:12084558/101‑1 (MQ=32) ttAAGTCCCGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGAt < 1:4789775/101‑1 (MQ=2) tAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGa < 1:13765061/101‑1 (MQ=32) tAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGa < 1:3603014/101‑1 (MQ=32) aaGTCCCGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGa > 1:6282535/1‑101 (MQ=2) aaGTCCCGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGa > 1:5155791/1‑101 (MQ=2) aaGTCCCGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGC‑ACGTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGa > 1:11225736/1‑101 (MQ=2) aaGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGTGATGAc > 1:6494202/1‑101 (MQ=17) aGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACg < 1:6891509/101‑1 (MQ=32) aGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACg > 1:4064472/1‑101 (MQ=33) gTCCCGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACg > 1:13264395/1‑101 (MQ=2) gTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGt < 1:1199420/101‑1 (MQ=32) tCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTc > 1:13477223/1‑101 (MQ=33) tCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTc > 1:9116962/1‑101 (MQ=33) tCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTc < 1:8726058/101‑1 (MQ=32) cccGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGC‑ACGTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTc > 1:12529578/1‑101 (MQ=2) cccGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCa > 1:7760696/1‑101 (MQ=33) cccGCAACGAGCGCAACCCTTATCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTT‑AACTCGGAGGAAGGTGGGGATGACGTc < 1:9839145/101‑1 (MQ=2) ccGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCa < 1:4553801/101‑1 (MQ=2) ccGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCa > 1:12670360/1‑101 (MQ=2) ccGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCa < 1:3007532/101‑1 (MQ=2) cGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCaa > 1:13059933/1‑101 (MQ=2) cGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCaa > 1:4423166/1‑101 (MQ=2) cGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCaa < 1:11627753/101‑1 (MQ=2) cGCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCC‑GGGGTTAACTCGGAGGAAGGTGGGGATGACGTCaa < 1:656266/101‑1 (MQ=2) cGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAg > 1:4639664/1‑101 (MQ=33) gCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCaaa > 1:2655674/1‑100 (MQ=2) gCAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCC‑GGGGTTAACTCGGAGGAAGGTGGGGATGACGTCaaa < 1:9540384/101‑2 (MQ=255) cAACGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCC‑GGGGTTAACTCGGAGGAAGGTGGGGATGACGTCaaat < 1:3157502/101‑3 (MQ=2) cAACGAGCGCAACCCTTGTCTTATGTTGCCAGC‑ACGTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCaaat > 1:2772573/1‑99 (MQ=2) cAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGtc > 1:4112276/1‑101 (MQ=33) aaCGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCAAAtc < 1:3402153/101‑1 (MQ=2) aaCGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCAAAtc < 1:8054046/101‑1 (MQ=255) aaCGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCAAAtc > 1:4221106/1‑101 (MQ=2) aaCGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGtca > 1:3499006/1‑101 (MQ=33) aCGAGCGCAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCAAAtca > 1:12312720/1‑101 (MQ=2) aCGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGtcat > 1:13748724/1‑101 (MQ=33) cGAGCGCAACCCTTGTCTTATGTTGCCAGC‑ACGTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCAAAtcat > 1:11655616/1‑101 (MQ=2) cGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGtcatc < 1:11831397/101‑1 (MQ=32) aGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTcatcat < 1:8272132/101‑1 (MQ=32) aGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTcatcat > 1:5363345/1‑101 (MQ=33) cgcAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCCGGGGTTAACTC‑GGAGGAAGGTGGGGATGACGTCAAATCATCATg > 1:13655212/1‑101 (MQ=2) gcAACCCTTGTCTTATGTTGCCAGCAC‑GTTGTGGTGGGGACTCGTAAGAAACTGCC‑GGGATTAACTCGGAGGAAGGTGGGGATGACGTCAAATCATCATgc > 1:11013387/1‑100 (MQ=2) cAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGcc > 1:6199676/1‑101 (MQ=32) cccTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCtt > 1:13388241/1‑101 (MQ=32) cccTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCtt < 1:9712954/101‑1 (MQ=32) ccTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTa < 1:2068801/101‑1 (MQ=32) ccTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTa > 1:3834356/1‑101 (MQ=32) cTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTAc < 1:8874460/101‑1 (MQ=32) cTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTAc < 1:1853418/101‑1 (MQ=32) cTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTAc > 1:1965204/1‑101 (MQ=32) ttttGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAg < 1:7480273/101‑1 (MQ=11) | GGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGC‑G‑GTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACT‑GGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAG > NC_007779/224803‑224990 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |