New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 = 274373NA (NA)94 (0.440) 60/180 NT 53.1% intergenic (‑32/‑176) insH/mmuP IS5 transposase and trans‑activator/S‑methylmethionine transporter
?NC_007779 = 657880 83 (0.380)coding (167/210 nt) cspE DNA‑binding transcriptional repressor

Only 100 of 101 total aligned reads displayed.

AAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_007779/274291‑274373
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGAACACGTCTTTGCTGCCGTCTT  <  NC_007779/657880‑657781
                                                                                                                                                                                       
AAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCT                                                                                    <  1:8402865/101‑1
AAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCT                                                                                    <  1:4038426/101‑1
AAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCT                                                                                    <  1:6431746/101‑1
 AGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTA                                                                                   >  1:6003223/1‑101
 AGTTGATGACTCATGATGAACCCTGTTCCATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTA                                                                                   <  1:3192260/101‑1
  GTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTAC                                                                                  <  1:11170742/101‑1
  GTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTAC                                                                                  <  1:6171108/101‑1
   TTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACG                                                                                 <  1:2650982/101‑1
    TGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGC                                                                                >  1:10570043/1‑101
     GATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCG                                                                               <  1:6823054/101‑1
     GATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCG                                                                               <  1:12305973/101‑1
     GATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCG                                                                               <  1:6435837/101‑1
       TGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCT                                                                             <  1:13958934/101‑1
       TGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCT                                                                             <  1:11115315/101‑1
       TGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCT                                                                             <  1:7917525/101‑1
       TGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCT                                                                             <  1:8114384/101‑1
       TGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCT                                                                             <  1:10023624/101‑1
         ACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGA                                                                           >  1:13575866/1‑101
          CTCATGATGAACCCTGTTCTTTGGCTCCAGATGACAAACATGATCTCATATCAGGGTCTTGTTCGCACCTTCCTTAGTGTTTTCGAACTCTACGCGCTGAC                                                                          >  1:13035952/1‑101
          CTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGAC                                                                          >  1:12728784/1‑101
           TCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACC                                                                         >  1:6727409/1‑101
            CATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCT                                                                        <  1:13365988/101‑1
              TGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTC                                                                      <  1:1085000/101‑1
               GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCA                                                                     >  1:4322823/1‑101
               GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCA                                                                     <  1:7442180/101‑1
               GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCA                                                                     <  1:13264486/101‑1
                ATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAG                                                                    <  1:7164314/101‑1
                ATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAG                                                                    <  1:7231536/101‑1
                  GAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCA                                                                  >  1:8207424/1‑101
                    ACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAG                                                                <  1:6868869/101‑1
                    ACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAG                                                                >  1:7378926/1‑101
                      CCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAG                                                              <  1:3062683/101‑1
                        TGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTT                                                            <  1:5009516/101‑1
                        TGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTT                                                            <  1:5135438/101‑1
                        TGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTT                                                            >  1:11528984/1‑101
                        TGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTT                                                            <  1:7058933/101‑1
                           TCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTA                                                         <  1:7809343/101‑1
                             TATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAA                                                       <  1:5133357/101‑1
                             TATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAA                                                       <  1:11710835/101‑1
                             TATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAA                                                       <  1:2054879/101‑1
                                 GCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCA                                                   >  1:631694/1‑101
                                 GCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCA                                                   >  1:6339774/1‑101
                                 GCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCA                                                   >  1:952421/1‑101
                                  CTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCAT                                                  <  1:13558886/101‑1
                                  CTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCAT                                                  <  1:898815/101‑1
                                  CTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCAT                                                  >  1:6720974/1‑101
                                   TCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATT                                                 <  1:6117265/101‑1
                                     CAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAG                                               >  1:6145874/1‑101
                                     CAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAG                                               >  1:12970468/1‑101
                                       GATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTC                                             >  1:5427128/1‑101
                                        ATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCT                                            <  1:3996387/101‑1
                                        ATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCT                                            <  1:10335851/101‑1
                                        ATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCT                                            <  1:964455/101‑1
                                         TGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTG                                           <  1:13911026/101‑1
                                           ACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGA                                         <  1:8037141/101‑1
                                             AAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATT                                       <  1:6052320/101‑1
                                             AAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATT                                       <  1:371905/101‑1
                                             AAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATT                                       >  1:3386652/1‑101
                                             AAACATGATCTCATAACAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATT                                       >  1:11912431/1‑101
                                              AACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTG                                      <  1:1065272/101‑1
                                                CATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCA                                    <  1:11554080/101‑1
                                                CATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCA                                    <  1:9820501/101‑1
                                                 ATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAG                                   >  1:174586/1‑101
                                                  TGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGA                                  <  1:1307871/101‑1
                                                  TGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGA                                  <  1:7277388/101‑1
                                                    ATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGA                                <  1:4947508/101‑1
                                                     TCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAA                               <  1:4081989/101‑1
                                                         ATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGT                           <  1:8654413/101‑1
                                                         ATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGT                           <  1:2287468/101‑1
                                                         ATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGT                           >  1:6822994/1‑101
                                                         ATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGT                           >  1:10434469/1‑101
                                                         ATATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGT                           <  1:12816912/101‑1
                                                          TATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTA                          <  1:861517/101‑1
                                                          TATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTA                          <  1:12357472/101‑1
                                                          TATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTA                          >  1:12368348/1‑101
                                                           ATCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTAC                         <  1:3954791/101‑1
                                                            TCAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACG                        >  1:700491/1‑101
                                                             CAGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGA                       >  1:3192197/1‑101
                                                              AGGGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGAA                      >  1:3974440/1‑101
                                                                GGACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGAACA                    <  1:2383249/101‑1
                                                                 GACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGAACAC                   <  1:4778535/101‑1
                                                                  ACTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGAACACG                  <  1:9548673/101‑1
                                                                   CTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGAACACGT                 >  1:10614992/1‑101
                                                                   CTTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGAACACGT                 >  1:12454991/1‑101
                                                                    TTGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGAACACGTC                >  1:9028080/1‑101
                                                                     TGTTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGAACACGTCT               >  1:11184603/1‑101
                                                                       TTCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGAACACGTCTTT             <  1:5500015/101‑1
                                                                        TCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGAACACGTCTTTG            <  1:6911351/101‑1
                                                                        TCGCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGAACACGTCTTTG            >  1:4905027/1‑101
                                                                          GCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGAACACGTCTTTGCT          >  1:9427759/1‑101
                                                                          GCACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGAACACGTCTTTGCT          >  1:3496227/1‑101
                                                                           CACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGAACACGTCTTTGCTG         <  1:4044837/101‑1
                                                                            ACCTTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGAACACGTCTTTGCTGC        >  1:7539686/1‑101
                                                                               TTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCATCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGAACACGTCTTTGCTGCCGT     <  1:8662067/101‑1
                                                                               TTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGAACACGTCTTTGCTGCCGT     >  1:10375276/1‑101
                                                                               TTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGAACACGTCTTTGCTGCCGT     >  1:7635619/1‑101
                                                                               TTCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGAACACGTCTTTGCTGCCGT     <  1:13276936/101‑1
                                                                                TCCTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGAACACGTCTTTGCTGCCGTC    >  1:13359033/1‑101
                                                                                  CTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGAACACGTCTTTGCTGCCGTCTT  <  1:2321888/101‑1
                                                                                  CTTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGAACACGTCTTTGCTGCCGTCTT  >  1:7574548/1‑101
                                                                                                                                                                                       
AAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_007779/274291‑274373
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTAGTGATTTCGAACTCTACGCGCTGACCTTCAGCAAGAGTTTTAAAACCATTAGTCTGGATTGCAGAGAAGTGTACGAACACGTCTTTGCTGCCGTCTT  <  NC_007779/657880‑657781

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.