New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_007779 3746911 =NA (NA)268 (1.240) 128/180 NT 100% intergenic (‑509/‑68) mdtL/insH multidrug efflux system protein/IS5 element protein
?NC_007779 = 3748646 0 (0.000)intergenic (+687/+425) insH/tnaA IS5 element protein/tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent

Only 100 of 678 total aligned reads displayed.

CGAACTTAACCACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCGATTAAATC  >  NC_007779/3748546‑3748746
                                                                                                    |                                                                                                    
 ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAt                                                                                                     >  1:3450965‑M2/97‑101 (MQ=255)
 ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAt                                                                                                     <  1:4566539‑M2/5‑1 (MQ=255)
 gAACTTAACCACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAg                                                                                                     <  1:4873364‑M2/101‑2 (MQ=255)
 gAACTTAACCACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAg                                                                                                     >  1:6889681‑M2/1‑100 (MQ=255)
  tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATg                                                                                                    <  1:6437119‑M2/6‑1 (MQ=255)
   caaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGa                                                                                                   <  1:2229399‑M2/7‑1 (MQ=255)
   caaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGa                                                                                                   >  1:4424557‑M2/95‑101 (MQ=255)
   aCTTAACCACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAgga                                                                                                   <  1:1224002‑M2/101‑4 (MQ=255)
   aCTTAACCACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAgga                                                                                                   >  1:11428655‑M2/1‑98 (MQ=255)
    aaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAACGAt                                                                                                  <  1:13700568‑M2/8‑1 (MQ=255)
     aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATc                                                                                                 >  1:5329776‑M2/93‑101 (MQ=255)
     aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATc                                                                                                 >  1:11693692‑M2/93‑101 (MQ=255)
       aaCCACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggt                                                                                               <  1:10004236‑M2/101‑8 (MQ=255)
         atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCAc                                                                                             >  1:4724904‑M2/89‑101 (MQ=255)
          tttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCAcc                                                                                            >  1:7753678‑M2/88‑101 (MQ=255)
           acaATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcga                                                                                           <  1:5500187‑M2/101‑12 (MQ=255)
               gggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAg                                                                                       >  1:6183184‑M2/83‑101 (MQ=255)
                 gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCa                                                                                     >  1:13390715‑M2/81‑101 (MQ=255)
                  gCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtc                                                                                    <  1:6918971‑M2/101‑19 (MQ=255)
                    aaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCagag                                                                                  <  1:9170959‑M2/24‑1 (MQ=255)
                     aaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAgaga                                                                                 <  1:3051390‑M2/25‑1 (MQ=255)
                       cAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctga                                                                               >  1:3878402‑M2/1‑78 (MQ=255)
                        aatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGatat                                                                              <  1:11353814‑M2/28‑1 (MQ=255)
                          tcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAg                                                                            <  1:4993504‑M2/30‑1 (MQ=255)
                          cGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatat                                                                            <  1:6517953‑M2/101‑27 (MQ=255)
                           gAAAATGGCTGTGCAGATCCCGACAATACGTGGATTGGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatg                                                                           <  1:4931464‑M2/101‑28 (MQ=255)
                             aaaTGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgag                                                                         >  1:9101620‑M2/1‑72 (MQ=255)
                              ctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCAt                                                                        >  1:371878‑M2/68‑101 (MQ=255)
                              ctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCAt                                                                        >  1:11991819‑M2/68‑101 (MQ=255)
                                 ggCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatca                                                                     <  1:12809699‑M2/101‑34 (MQ=255)
                                 aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAg                                                                     >  1:1975754‑M2/65‑101 (MQ=255)
                                   acatgaagaaatgaaataactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTg                                                                   <  1:875778‑M2/39‑1 (MQ=255)
                                    tgtgCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgt                                                                  >  1:4633588‑M2/1‑65 (MQ=255)
                                    catgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGa                                                                  >  1:9403339‑M2/62‑101 (MQ=255)
                                       gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGa                                                               >  1:8085965‑M2/59‑101 (MQ=255)
                                       gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGa                                                               <  1:10496665‑M2/43‑1 (MQ=255)
                                        cAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgt                                                              <  1:7666203‑M2/101‑41 (MQ=255)
                                        aagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGat                                                              <  1:279971‑M2/44‑1 (MQ=255)
                                           aTCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcat                                                           <  1:5080686‑M2/101‑44 (MQ=255)
                                              ccGACAATACGTGGATTAGCGTGATAACCCAAATTCATTTATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg                                                        >  1:2290123‑M2/1‑55 (MQ=255)
                                               gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAgaga                                                       <  1:3661864‑M2/51‑1 (MQ=255)
                                                 aatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAAc                                                     >  1:12773758‑M2/49‑101 (MQ=255)
                                                  atgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACg                                                    >  1:2610682‑M2/48‑101 (MQ=255)
                                                       tgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGc                                               >  1:10832896‑M2/43‑101 (MQ=255)
                                                        gTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccataga                                              >  1:6075287‑M2/1‑45 (MQ=255)
                                                          gtcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAAc                                            <  1:10399944‑M2/62‑1 (MQ=255)
                                                          ggATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaac                                            <  1:1617387‑M2/101‑59 (MQ=255)
                                                           tcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACg                                           <  1:5926194‑M2/63‑1 (MQ=255)
                                                           tcagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACg                                           >  1:9803827‑M2/39‑101 (MQ=255)
                                                            cagccgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACgg                                          <  1:10748408‑M2/64‑1 (MQ=255)
                                                                cgagaagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAAt                                      >  1:7921838‑M2/34‑101 (MQ=255)
                                                                 cGTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaccgggttc                                     <  1:12697901‑M2/101‑66 (MQ=255)
                                                                  gTGATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttca                                    <  1:7533501‑M2/101‑67 (MQ=255)
                                                                    gATAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc                                  >  1:5729797‑M2/1‑33 (MQ=255)
                                                                    aagaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCg                                  <  1:7172422‑M2/72‑1 (MQ=255)
                                                                     agaatttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGc                                 <  1:856883‑M2/73‑1 (MQ=255)
                                                                      tAACCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat                                <  1:13991975‑M2/101‑71 (MQ=255)
                                                                       aaCCCAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg                               >  1:2348194‑M2/1‑30 (MQ=255)
                                                                        atttccccgcttattcgcaccttccCTAATGATCGCACTATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGa                              >  1:10629626‑M2/26‑101 (MQ=255)
                                                                         tttccccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGAt                             <  1:2091895‑M2/77‑1 (MQ=255)
                                                                          ccAAATTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagt                            <  1:11898020‑M2/101‑75 (MQ=255)
                                                                              ccgcttattcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGt                        <  1:11173424‑M2/82‑1 (MQ=255)
                                                                              aTTCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatc                        <  1:9498683‑M2/101‑79 (MQ=255)
                                                                                tCATTGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa                      >  1:8258171‑M2/1‑21 (MQ=255)
                                                                                   ttGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt                   >  1:13296521‑M2/1‑18 (MQ=255)
                                                                                   ttGATATCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt                   <  1:8512055‑M2/101‑84 (MQ=255)
                                                                                     ttcgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGgt                 >  1:8834702‑M2/13‑101 (MQ=255)
                                                                                       tatCGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacct               >  1:13202565‑M2/1‑14 (MQ=255)
                                                                                       cgcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGgtgt               >  1:14209843‑M2/11‑101 (MQ=255)
                                                                                        gcaccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGtt              >  1:4272259‑M2/10‑101 (MQ=255)
                                                                                          cGTTTCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcg            >  1:2437036‑M2/1‑11 (MQ=255)
                                                                                          accttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTAc            >  1:866642‑M2/8‑101 (MQ=255)
                                                                                           ccttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTAcc           >  1:9897158‑M2/7‑101 (MQ=255)
                                                                                           aaatcacTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaagttaccttcgc           >  1:13883521‑M2/4‑10 (MQ=255)
                                                                                            cttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCg          <  1:6662464‑M2/96‑1 (MQ=255)
                                                                                            cttccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCg          >  1:1496554‑M2/6‑101 (MQ=255)
                                                                                            aatcaCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcc          >  1:1776667‑M2/3‑9 (MQ=255)
                                                                                              tccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCGAt        <  1:11108048‑M2/98‑1 (MQ=255)
                                                                                              tccCTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCGAt        >  1:7114570‑M2/4‑101 (MQ=255)
                                                                                              tCACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccga        >  1:6739754‑M2/1‑7 (MQ=255)
                                                                                                tctAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca      <  1:10242603‑M2/100‑97 (MQ=255)
                                                                                                aCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca      <  1:928658‑M2/101‑97 (MQ=255)
                                                                                                aCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca      >  1:329275‑M2/1‑5 (MQ=255)
                                                                                                 cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag     >  1:13075517‑M2/1‑4 (MQ=255)
                                                                                                 cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag     <  1:1298280‑M2/101‑98 (MQ=255)
                                                                                                 cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag     >  1:7290857‑M2/1‑4 (MQ=255)
                                                                                                  tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt    <  1:4089197‑M2/101‑99 (MQ=255)
                                                                                                  tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt    <  1:5641271‑M2/101‑99 (MQ=255)
                                                                                                  tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt    <  1:8948372‑M2/101‑99 (MQ=255)
                                                                                                  tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt    <  1:12134316‑M2/101‑99 (MQ=255)
                                                                                                  tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt    >  1:2901408‑M2/1‑3 (MQ=255)
                                                                                                  tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt    <  1:11807002‑M2/101‑99 (MQ=255)
                                                                                                   aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtg   >  1:5186805‑M2/1‑2 (MQ=255)
                                                                                                   aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtg   <  1:12574720‑M2/101‑100 (MQ=255)
                                                                                                   aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtg   <  1:12390672‑M2/101‑100 (MQ=255)
                                                                                                   aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtg   >  1:10313539‑M2/1‑2 (MQ=255)
                                                                                                   aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtg   <  1:9603280‑M2/101‑100 (MQ=255)
                                                                                                    aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtga  >  1:2494782‑M2/1‑1 (MQ=255)
                                                                                                    aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtga  >  1:1008515‑M2/1‑1 (MQ=255)
                                                                                                    aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtga  >  1:13497486‑M2/1‑1 (MQ=255)
                                                                                                    |                                                                                                    
CGAACTTAACCACAATACGCTGGCAACGAAAATGGCTGTGCAGATCCCGACAATACGTGGATTAGCGTGATAACCCAAATTCATTGATATCGTTTCACTAATGATCGCACCATTAGCAGAGATATAGGCATAAGTGAGGATATAGAGAACGAAGGCAACGGTAATACCGCTGATAATGTTCCAGGTGTTACCGATTAAATC  >  NC_007779/3748546‑3748746

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.