| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 846,334 | T→A | 5.8% | E184D (GAA→GAT) | glnQ ← | glutamine transporter subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 846,334 | 0 | T→A | 5.8% | 32.5 ‑0.5 ‑0.0 | 258 | E184D (GAA→GAT) | glnQ | glutamine transporter subunit |
| Reads supporting (aligned to +/- strand): new base (6/9): ref base (118/125): total (124/134) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.01e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.96e-01 | ||||||||||
Only 100 of 276 total aligned reads displayed.
CATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCA > NC_007779/846234‑846434 | tCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCttcttc > 1:8419182/1‑101 (MQ=255) cTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCa < 1:12028154/101‑1 (MQ=255) cTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCa < 1:2627252/101‑1 (MQ=255) ccGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGcc > 1:7950373/1‑101 (MQ=255) ccGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGcc < 1:2317309/101‑1 (MQ=255) cGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCa < 1:11562742/101‑1 (MQ=255) cGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCCTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCCGCCa < 1:13510554/101‑1 (MQ=255) cAATCCTGACTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGa < 1:2865096/101‑1 (MQ=255) aaTCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGAt > 1:14183432/1‑101 (MQ=255) aaTCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGAt < 1:12388807/101‑1 (MQ=255) aaTCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGAt < 1:3811986/101‑1 (MQ=255) aaTCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTACTTCAGCCAGAt > 1:6420663/1‑101 (MQ=255) aTCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATc > 1:6236229/1‑101 (MQ=255) aTCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATc > 1:1691137/1‑101 (MQ=255) aTCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATc > 1:880091/1‑101 (MQ=255) tCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATcc < 1:7236554/101‑1 (MQ=255) ccGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATTACCATCGTCAT‑CCCTTCTTCAGCCAGATCCt < 1:4331276/101‑1 (MQ=255) cGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTg < 1:7136957/101‑1 (MQ=255) ccTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCAt < 1:10999978/101‑1 (MQ=255) ccTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCAt < 1:9539949/101‑1 (MQ=255) ccTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCAt < 1:10130943/101‑1 (MQ=255) cTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATa > 1:12581072/1‑101 (MQ=255) cTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATa > 1:2413070/1‑101 (MQ=255) cTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGAACACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATa < 1:10926033/101‑1 (MQ=255) tttGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATaa > 1:14160735/1‑101 (MQ=255) ttGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAAc > 1:2938552/1‑101 (MQ=255) ttGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAAc < 1:12165821/101‑1 (MQ=255) tCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCtt < 1:2158469/101‑1 (MQ=255) tCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCtt > 1:10237408/1‑101 (MQ=255) cGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTc < 1:3391508/101‑1 (MQ=255) gATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCa < 1:7846239/101‑1 (MQ=255) gATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCa < 1:8122532/101‑1 (MQ=255) aTAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAg > 1:13976215/1‑101 (MQ=255) aTAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAg < 1:5420266/101‑1 (MQ=255) tAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGc < 1:1457487/101‑1 (MQ=255) tAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGc > 1:10512670/1‑101 (MQ=255) aGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACt > 1:268516/1‑101 (MQ=255) aGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACt > 1:11237580/1‑101 (MQ=255) gATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACtt < 1:3062884/101‑1 (MQ=255) gATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACtt < 1:3011242/101‑1 (MQ=255) aTCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTc > 1:6660275/1‑101 (MQ=255) aTCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTc < 1:8708526/101‑1 (MQ=255) aTCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTc < 1:13827909/101‑1 (MQ=255) tCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCa < 1:7401022/101‑1 (MQ=255) ccGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGgc > 1:5218838/1‑101 (MQ=255) gcgAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGgcgc > 1:9046653/1‑101 (MQ=255) cgAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCa > 1:4401752/1‑101 (MQ=255) gCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTc < 1:11832598/101‑1 (MQ=255) cTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTcc < 1:2557587/101‑1 (MQ=255) tACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCg < 1:1981944/101‑1 (MQ=255) aCTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCgg < 1:4904313/101‑1 (MQ=255) aCTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCgg > 1:3183687/1‑101 (MQ=255) aCTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCgg < 1:1913304/101‑1 (MQ=255) aCTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCgg < 1:1043258/101‑1 (MQ=255) tttCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGt < 1:2966343/101‑1 (MQ=255) ctcGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCaa > 1:5774588/1‑101 (MQ=255) gCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGc < 1:3982301/101‑1 (MQ=255) cAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCg > 1:4773994/1‑101 (MQ=255) cAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCg < 1:6926016/101‑1 (MQ=255) aaaCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGa > 1:6604587/1‑101 (MQ=255) aaaCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGa < 1:1825596/101‑1 (MQ=255) aaaCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGa < 1:5163609/101‑1 (MQ=255) aaCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGaa > 1:5845667/1‑101 (MQ=255) aaCCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCACCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGaa > 1:2380101/1‑101 (MQ=255) gcccctctCGTGCGTCACGACGACCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCA‑CCGACGAGCTCCGGGTCAAGAGCGGAAg < 1:9879105/94‑1 (MQ=255) cGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTc > 1:4966934/1‑101 (MQ=255) cGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTc < 1:9589778/101‑1 (MQ=255) cGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTc < 1:12428356/101‑1 (MQ=255) gATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCg < 1:7612156/101‑1 (MQ=255) gATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCg < 1:10083872/101‑1 (MQ=255) catctCGTGCGTCACGACGACCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCA‑CCGACGAGCTCCGGGTCAAGAGCGGAAATCg > 1:5099647/5‑101 (MQ=255) atctCGTGCGTCACGACGACCATGGTCATACCCTT‑ATCGGCCAGACCATGCATGACGTTGAGAACCTCA‑CCGACGAGCTCCGGGTCAAGAGCGGAAGTCgg > 1:10769565/4‑101 (MQ=255) aTTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCgg > 1:11687137/1‑101 (MQ=255) tttCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGt < 1:12338812/101‑1 (MQ=255) cGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtca < 1:9914318/101‑1 (MQ=255) cGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtca < 1:1204250/101‑1 (MQ=255) cGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCAGTtca > 1:163073/1‑101 (MQ=255) gTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtcat > 1:9710376/1‑101 (MQ=255) gTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtcat > 1:7680187/1‑101 (MQ=255) gTGCGTCACGACGACCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCACCGACG‑AGCTCCGGGTCAAGAGCGGAAGTCGGCtcat < 1:8782062/101‑1 (MQ=255) tGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTtcatc > 1:4655723/1‑101 (MQ=255) gcgTCACGACGACCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCA‑CCGACGAGCTCCGGGTCAAGAGCGGAAGTCGGCtcatcg < 1:5561886/99‑2 (MQ=255) ggTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCaa > 1:10878379/1‑101 (MQ=255) cACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACa > 1:12977862/1‑101 (MQ=255) cACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACa > 1:1328804/1‑101 (MQ=255) aCGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAg > 1:2712448/1‑101 (MQ=255) cgacgaCCATGGTCAT‑ACCCTTATCGGCCAGACCATGCATGACGTTGAGAACCTCA‑CCGACGAGCTCCGGGTCAAGAGCGGAAGTCGGCTCATCGAAGAGc < 1:10034095/96‑1 (MQ=255) cGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGc < 1:11354194/101‑1 (MQ=255) aCCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGcatcat > 1:6032599/1‑101 (MQ=255) aTCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCAtttt < 1:9477470/101‑1 (MQ=255) aTCGTCAT‑CCCTTCTTCAGCCAGATCCAGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCAtttt > 1:12860774/1‑101 (MQ=255) cAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCt < 1:7460893/101‑1 (MQ=255) cAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCt > 1:4558648/1‑101 (MQ=255) aT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCtt < 1:5285617/101‑1 (MQ=255) t‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTc < 1:11781632/101‑1 (MQ=255) t‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTc > 1:7000967/1‑101 (MQ=255) tcttcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGc < 1:407613/101‑1 (MQ=255) ttcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCa < 1:13742345/101‑1 (MQ=255) ttcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCa < 1:13162914/101‑1 (MQ=255) ttcAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCa < 1:6723791/101‑1 (MQ=255) | CATCTTCCGCAATCCGGCCTTTGTCGATAAAGATCAGCCGCGAAGCTACTTTCTCGGCAAAACCGATTTCGTGGGTCACGATCACCATCGTCAT‑CCCTTCTTCAGCCAGATCCTGCATAACCTTCAGCACTTCA‑TGGCGCAGTTCCGGGTCAAGAGCGGAAGTCGGTTCATCAAACAGCATCATTTTCGGCTTCACCGCCA > NC_007779/846234‑846434 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |