Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 13,402 A→C 6.1% K414Q (AAA→CAA)  dnaK → chaperone Hsp70, co‑chaperone with DnaJ

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_00777913,4020A→C 6.1% 40.7 0.0 ‑0.2229K414Q (AAA→CAA) dnaKchaperone Hsp70, co‑chaperone with DnaJ
Reads supporting (aligned to +/- strand):  new base (8/6):  ref base (115/100):  total (123/106)
Fisher's exact test strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.04e-01

Only 100 of 244 total aligned reads displayed.

TGTTCTGACTGGTGACGTAAAAGACGTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGTGCTGCAGGGTGAACGTAAACG  >  NC_007779/13302‑13502
                                                                                                    |                                                                                                    
tgtTCTGACTGGTGACGTAAAAGACGTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGa                                                                                                      <  1:6715313/101‑1 (MQ=255)
  ttCTGACTGGTGACGTAAAAGACGTACTGCTGCTGGACGTTTCCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGaaa                                                                                                    <  1:3709286/101‑1 (MQ=255)
  ttCTGACTGGTGACGTAAAAGACGTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGaaa                                                                                                    >  1:1369504/1‑101 (MQ=255)
   tCTGACTGGTGACGTAAAAGACGTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGaaaa                                                                                                   <  1:4579888/101‑1 (MQ=255)
       aCTGGTGACGTAAAAGACGTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAacac                                                                                               <  1:12568620/101‑1 (MQ=255)
        cTGGTGACGTAAAAGACGTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAAcacc                                                                                              <  1:13448598/101‑1 (MQ=255)
         tGGTGACGTAAAAGACGTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAAcacca                                                                                             >  1:637037/1‑101 (MQ=255)
         tGGTGACGTAAAAGACGTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAAcacca                                                                                             <  1:12157651/101‑1 (MQ=255)
           gTGACGTAAAAGACGTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACt                                                                                           <  1:10748144/101‑1 (MQ=255)
            tGACGTAAAAGACGTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTa                                                                                          >  1:14250713/1‑101 (MQ=255)
            tGACGTAAAAGACGTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTa                                                                                          >  1:1103415/1‑101 (MQ=255)
             gACGTAAAAGACGTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTAt                                                                                         >  1:11432596/1‑101 (MQ=255)
             gACGTAAAAGACGTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTAt                                                                                         <  1:2924375/101‑1 (MQ=255)
             gACGTAAAAGACGTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTAt                                                                                         <  1:6574683/101‑1 (MQ=255)
               cGTAAAAGACGTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATcc                                                                                       >  1:11337613/1‑101 (MQ=255)
               cGTAAAAGACGTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATcc                                                                                       >  1:7415675/1‑101 (MQ=255)
                gTAAAAGACGTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATccc                                                                                      <  1:6507437/101‑1 (MQ=255)
                       aCGTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAg                                                                               <  1:9406615/101‑1 (MQ=255)
                       aCGTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAg                                                                               >  1:2350360/1‑101 (MQ=255)
                        cGTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGc                                                                              <  1:12292872/101‑1 (MQ=255)
                        cGTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGc                                                                              <  1:9780702/101‑1 (MQ=255)
                         gTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGca                                                                             <  1:1877167/101‑1 (MQ=255)
                          tACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGcac                                                                            >  1:2321527/1‑101 (MQ=255)
                           gctgctgctcGACGTTACCCCGCTGTCGCTGGGTATTGAGACCAAGGGCGGTGTCATGACCAAGCTGATCGAGCGCAACACCACTATCCCGACCAAGcgtt                                                                           <  1:11601029/100‑4 (MQ=255)
                           aCTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGcaca                                                                           <  1:5188014/101‑1 (MQ=255)
                            ctgctgctgGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAg                                                                          <  1:9177022/101‑1 (MQ=255)
                            ctgctgctgGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAg                                                                          >  1:7515959/1‑101 (MQ=255)
                            ctgctgctgGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAg                                                                          >  1:7192022/1‑101 (MQ=255)
                            ctgctgctcGACGTTACCCCGCTGTCGCTGGGTATTGAGACCAAGGGCGGTGTCATGACCAAGCTGATCGAGCGCAACACCACTATCCCGACCAAGcgttc                                                                          <  1:13331415/101‑5 (MQ=255)
                               ctgctgGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCa                                                                       <  1:9619543/101‑1 (MQ=255)
                                tgctgGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAg                                                                      >  1:12206992/1‑101 (MQ=255)
                                tgctgGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAg                                                                      <  1:5451502/101‑1 (MQ=255)
                                tgctcGACGTTACCCCGCTGTCGCTGGGTATTGAGACCAAGGGCGGTGTCATGACCAAGCTGATCGAGCGCAACACCACTATCCCGACCAAGcgttcggag                                                                      >  1:7818699/1‑93 (MQ=255)
                                 gctgGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAgg                                                                     >  1:11709306/1‑101 (MQ=255)
                                     gACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGtt                                                                 >  1:7980481/1‑101 (MQ=255)
                                      aCGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTtc                                                                >  1:9873677/1‑101 (MQ=255)
                                       cGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTtct                                                               <  1:7768360/101‑1 (MQ=255)
                                       cGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTtct                                                               >  1:1443620/1‑101 (MQ=255)
                                       cGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTtct                                                               >  1:3385333/1‑101 (MQ=255)
                                         ttACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTctct                                                             <  1:2679623/101‑1 (MQ=255)
                                         ttACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTctct                                                             <  1:5668362/101‑1 (MQ=255)
                                         ttACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTctct                                                             >  1:6318838/1‑101 (MQ=255)
                                           aCCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGTCAGGTGTTCTCTAc                                                           >  1:13809417/1‑101 (MQ=255)
                                           aCCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTAc                                                           <  1:10037783/101‑1 (MQ=255)
                                           aCCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTAc                                                           >  1:2140792/1‑101 (MQ=255)
                                            ccccGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTAcc                                                          <  1:11982460/101‑1 (MQ=255)
                                             cccGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCg                                                         >  1:10072331/1‑101 (MQ=255)
                                               cGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCt                                                       <  1:5409387/101‑1 (MQ=255)
                                               cGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCt                                                       >  1:7087821/1‑101 (MQ=255)
                                                gCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTg                                                      <  1:4902725/101‑1 (MQ=255)
                                                gCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTg                                                      <  1:1854207/101‑1 (MQ=255)
                                                 cTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGa                                                     >  1:5300143/1‑101 (MQ=255)
                                                    tctcTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGa                                                  >  1:13587705/1‑101 (MQ=255)
                                                    tctcTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGa                                                  >  1:10362033/1‑101 (MQ=255)
                                                    tatctGGGTATCGAAACCACGGGCGGTGTGATGAAGACGCTGATCCCGAAAAACGCCACTATCCCGACCAAGCTCAGCCAGGTGCTCTCTACCGCTGAAGa                                                  <  1:888346/99‑1 (MQ=255)
                                                     ctgtGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCCCTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGAc                                                 <  1:5029795/98‑1 (MQ=255)
                                                     ctctGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGAc                                                 >  1:14110929/1‑101 (MQ=255)
                                                      tctGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACa                                                <  1:13217048/101‑1 (MQ=255)
                                                        tGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAAc                                              >  1:9581522/1‑101 (MQ=255)
                                                          ggTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCa                                            <  1:11079124/101‑1 (MQ=255)
                                                             aTCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTc                                         >  1:5560987/1‑101 (MQ=255)
                                                              tCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCt                                        <  1:8236432/101‑1 (MQ=255)
                                                                 aaaCCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCg                                     <  1:2997825/101‑1 (MQ=255)
                                                                 aaaCCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCg                                     >  1:11840085/1‑101 (MQ=255)
                                                                 aaaCCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCg                                     >  1:2011305/1‑101 (MQ=255)
                                                                 aaaCCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCg                                     >  1:13634542/1‑101 (MQ=255)
                                                                  aaCCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCgg                                    >  1:5070243/1‑101 (MQ=255)
                                                                   aCCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGt                                   >  1:9446914/1‑101 (MQ=255)
                                                                    ccATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTa                                  >  1:9522195/1‑101 (MQ=255)
                                                                      aTGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAAc                                <  1:9651651/101‑1 (MQ=255)
                                                                      aTGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAAc                                >  1:3909459/1‑101 (MQ=255)
                                                                         ggCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAAccat                             <  1:12699425/101‑1 (MQ=255)
                                                                           cGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAAccatcc                           >  1:9935490/1‑101 (MQ=255)
                                                                              tgtgATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCAtg                        >  1:8947951/1‑101 (MQ=255)
                                                                               gtgATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCAtgt                       <  1:8774226/101‑1 (MQ=255)
                                                                                tgatgaCGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCAtgtg                      >  1:12247211/1‑101 (MQ=255)
                                                                                 gatgaCGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGtgc                     <  1:4725980/101‑1 (MQ=255)
                                                                                  atgaCGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGtgct                    >  1:13090643/1‑101 (MQ=255)
                                                                                   tgaCGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGtgctg                   <  1:3169846/101‑1 (MQ=255)
                                                                                    gacgacGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGtgctgc                  >  1:5727809/1‑101 (MQ=255)
                                                                                    gacgacGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGtgctgc                  >  1:7112276/1‑101 (MQ=255)
                                                                                    gacgacGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGtgctgc                  >  1:4304489/1‑101 (MQ=255)
                                                                                     acgacgCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGTGCTGCa                 <  1:4510978/101‑1 (MQ=255)
                                                                                      cgacgCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGTGCTGCAg                >  1:6443665/1‑101 (MQ=255)
                                                                                       gacgCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGTGCTGCAgg               <  1:10139934/101‑1 (MQ=255)
                                                                                       gacgCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGTGCTGCAgg               <  1:812653/101‑1 (MQ=255)
                                                                                         cgCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGTGCTGCAGGGt             >  1:8361050/1‑101 (MQ=255)
                                                                                         cgCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGTGCTGCAGGGt             <  1:2599156/101‑1 (MQ=255)
                                                                                          gCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGTGCTGCAGGGTg            >  1:5806693/1‑101 (MQ=255)
                                                                                            tGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGTGCTGCAGGGTGaa          >  1:4095318/1‑101 (MQ=255)
                                                                                            tGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGTGCTGCAGGGTGaa          >  1:12385076/1‑101 (MQ=255)
                                                                                            tGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGTGCTGCAGGGTGaa          >  1:5364070/1‑101 (MQ=255)
                                                                                              aTCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGTGCTGCAGGGTGAACg        >  1:11208468/1‑101 (MQ=255)
                                                                                                cgcgAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGTGCTGCAGGGTGAACGTa      >  1:10828732/1‑101 (MQ=255)
                                                                                                cgcgAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGTGCTGCAGGGTGAACGTa      >  1:10412811/1‑101 (MQ=255)
                                                                                                 gcgAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGTGCTGCAGGGTGAACGTaa     <  1:5740867/101‑1 (MQ=255)
                                                                                                  cgAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGTGCTGCAGGGTGAACGTaaa    >  1:1684851/1‑101 (MQ=255)
                                                                                                   gAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGTGCTGCGGGGGGACCGAaaag   >  1:765163/1‑100 (MQ=255)
                                                                                                   gAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGTGCTGCAGGGTGAACGTAAAc   <  1:2573878/101‑1 (MQ=255)
                                                                                                   gAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGTGCTGCAGGGTGAACGTAAAc   <  1:3522191/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
TGTTCTGACTGGTGACGTAAAAGACGTACTGCTGCTGGACGTTACCCCGCTGTCTCTGGGTATCGAAACCATGGGCGGTGTGATGACGACGCTGATCGCGAAAAACACCACTATCCCGACCAAGCACAGCCAGGTGTTCTCTACCGCTGAAGACAACCAGTCTGCGGTAACCATCCATGTGCTGCAGGGTGAACGTAAACG  >  NC_007779/13302‑13502

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.