| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,485,362 | T→C | 13.0% | I177I (ATT→ATC) | hrpA → | ATP‑dependent helicase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 1,485,362 | 0 | T→C | 13.0% | 92.7 ‑0.3 ‑1.7 | 254 | I177I (ATT→ATC) | hrpA | ATP‑dependent helicase |
| Reads supporting (aligned to +/- strand): new base (17/16): ref base (102/118): total (119/135) | ||||||||||
| Fisher's exact test strand distribution p-value = 7.09e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.03e-02 | ||||||||||
Only 100 of 270 total aligned reads displayed.
ACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCG > NC_007779/1485262‑1485462 | aCGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCattatt < 1:7096348/101‑1 (MQ=255) gTAAGTGATAACACTATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGa < 1:2679294/101‑1 (MQ=255) gTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGa > 1:11259292/1‑101 (MQ=255) gTAAGTGATAACACGATGGTCAAGCTGACGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGa > 1:5984430/1‑101 (MQ=255) tAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGAc > 1:3944681/1‑101 (MQ=255) tAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGAc < 1:11199364/101‑1 (MQ=255) aaGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACg < 1:7232066/101‑1 (MQ=255) gTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGaa > 1:6083682/1‑101 (MQ=255) gTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGaa < 1:3358652/101‑1 (MQ=255) gATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAgc < 1:485568/101‑1 (MQ=255) gATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAgc < 1:10789044/101‑1 (MQ=255) tAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAgcgc < 1:9543337/101‑1 (MQ=255) aaCACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCa > 1:3725089/1‑101 (MQ=255) acacGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCAc < 1:4670088/101‑1 (MQ=255) cacGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACg < 1:7821079/101‑1 (MQ=255) cacGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACg > 1:12710418/1‑101 (MQ=255) cGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGaa < 1:6522608/101‑1 (MQ=255) gATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAAc > 1:8128554/1‑101 (MQ=255) gATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAAc > 1:10587552/1‑101 (MQ=255) tgcattaaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACg > 1:6902088/10‑101 (MQ=255) tgcattaaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACg < 1:4978027/92‑1 (MQ=255) tgcattaaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACg > 1:1901017/10‑101 (MQ=255) aTGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACg < 1:3219559/101‑1 (MQ=255) gcattaaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGc > 1:5059268/9‑101 (MQ=255) gcattaaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGc > 1:5420356/9‑101 (MQ=255) ggTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCa > 1:2748838/1‑101 (MQ=255) ttaaacTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGc > 1:2330640/6‑101 (MQ=255) tCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGc < 1:13586817/101‑1 (MQ=255) aaGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCt > 1:2027804/1‑101 (MQ=255) aaGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCt > 1:4148092/1‑101 (MQ=255) aaGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCt < 1:10130297/101‑1 (MQ=255) aaGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCt > 1:6817514/1‑101 (MQ=255) aaGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCt < 1:1288183/101‑1 (MQ=255) aaGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCt < 1:13124132/101‑1 (MQ=255) aGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTg < 1:7952648/101‑1 (MQ=255) gCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGa < 1:13922251/101‑1 (MQ=255) cTGATGACCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCaa > 1:14006862/1‑101 (MQ=255) tgatgaCCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAat < 1:12804700/101‑1 (MQ=255) tgatgaCCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAat > 1:289535/1‑101 (MQ=255) tgatgaCCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAat > 1:7030006/1‑101 (MQ=255) gatgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCaaca < 1:12507595/101‑3 (MQ=255) gatgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCaaca < 1:458712/101‑3 (MQ=255) atgaCCGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAacat > 1:12273039/1‑101 (MQ=255) gaCCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCg > 1:398942/1‑101 (MQ=255) gaCCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCg < 1:2594173/101‑1 (MQ=255) ccGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAt > 1:4711406/1‑101 (MQ=255) cGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAtt > 1:10730955/1‑101 (MQ=255) cGACGGTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGact > 1:4454649/1‑99 (MQ=255) aCGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAtttt < 1:7858453/101‑1 (MQ=255) cGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAttttt < 1:9771593/101‑1 (MQ=255) ggTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGAtttttt < 1:5021865/101‑1 (MQ=255) ggTATCCTGCTGGCCGAAATTGGCCGCGACCGACTGTTGCGTGAGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGActtcct < 1:581122/101‑4 (MQ=255) gTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTg < 1:10274891/101‑1 (MQ=255) gTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTg < 1:12625329/101‑1 (MQ=255) aTCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCt > 1:3487590/1‑101 (MQ=255) tCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTc > 1:13706884/1‑101 (MQ=255) tCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTc < 1:5283379/101‑1 (MQ=255) tCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACCATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTc > 1:12105040/1‑101 (MQ=255) ccTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTTCTCg < 1:6430791/101‑1 (MQ=255) ctgctgGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCgg < 1:1062501/101‑1 (MQ=255) ctgctgGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACCACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCgg < 1:14328955/101‑1 (MQ=255) tgctgGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGc < 1:1111373/101‑1 (MQ=255) tgctgGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGc > 1:5658746/1‑101 (MQ=255) tgGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTAt < 1:4267286/101‑1 (MQ=255) tgGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTAt > 1:5550871/1‑101 (MQ=255) ggCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTAtt > 1:1072308/1‑101 (MQ=255) cGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTg < 1:13825596/101‑1 (MQ=255) tCCAGCAAGACCGCCTGGTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAagag > 1:9037542/1‑101 (MQ=255) tCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAagag < 1:8460591/101‑1 (MQ=255) tCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAagag > 1:7768292/1‑101 (MQ=255) ccAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGt > 1:1165247/1‑101 (MQ=255) ccAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGt < 1:2405848/101‑1 (MQ=255) cAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGtt > 1:11457651/1‑101 (MQ=255) cAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTtgct < 1:8731172/101‑1 (MQ=255) gACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGcc < 1:10910840/101‑1 (MQ=255) aCCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCcg < 1:8408145/101‑1 (MQ=255) cGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCcgcg > 1:1651987/1‑101 (MQ=255) cGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCcgcg < 1:9930643/101‑1 (MQ=255) ccggctgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTTAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCgcggc < 1:389220/98‑1 (MQ=255) ccTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCgcggc < 1:8969646/101‑1 (MQ=255) ctgctgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCgcggcg > 1:10359411/1‑101 (MQ=255) ctgctgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCgcggcg > 1:2499697/1‑101 (MQ=255) tgttgcgtgaGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCgcagcgc > 1:947470/10‑100 (MQ=255) gctgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTc > 1:9104400/1‑101 (MQ=255) gATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTg < 1:12391479/101‑1 (MQ=255) tgaGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGCATATTCTGCCGCAGCGCCCAGatc > 1:1778138/3‑99 (MQ=255) gCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGAcc > 1:8267182/1‑101 (MQ=255) cAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCt < 1:13250012/101‑1 (MQ=255) aGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTa < 1:5380702/101‑1 (MQ=255) aCGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTaaaa > 1:12996960/1‑101 (MQ=255) cGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTaaaaa > 1:1964739/1‑101 (MQ=255) acacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATc > 1:7400935/1‑101 (MQ=255) cacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCa < 1:3446138/101‑1 (MQ=255) cacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCa < 1:11410267/101‑1 (MQ=255) tATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTa > 1:218801/1‑101 (MQ=255) tATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTa < 1:10398723/101‑1 (MQ=255) attGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTc < 1:7693170/101‑1 (MQ=255) attGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTACTGACCTAAAAATCATTATCACTTc > 1:6320237/1‑101 (MQ=255) ttGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTcc < 1:8839584/101‑1 (MQ=255) tGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcg < 1:11937513/101‑1 (MQ=255) | ACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTGGCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCG > NC_007779/1485262‑1485462 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |