| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,485,419 | G→T | 8.7% | E196D (GAG→GAT) | hrpA → | ATP‑dependent helicase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 1,485,419 | 0 | G→T | 8.7% | 47.5 0.0 ‑0.0 | 230 | E196D (GAG→GAT) | hrpA | ATP‑dependent helicase |
| Reads supporting (aligned to +/- strand): new base (10/10): ref base (101/109): total (111/119) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.60e-01 | ||||||||||
Only 100 of 247 total aligned reads displayed.
TCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAG > NC_007779/1485319‑1485519 | tCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAag‑ag < 1:8460591/101‑1 (MQ=255) ccAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGt < 1:2405848/101‑1 (MQ=255) ccAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGt > 1:1165247/1‑101 (MQ=255) cAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGtt < 1:4484096/101‑1 (MQ=255) aGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTAACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTtg > 1:6021222/1‑101 (MQ=255) gCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTtgc < 1:12541027/101‑1 (MQ=255) cAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTtgct > 1:7085609/1‑101 (MQ=255) aGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTtgctgc > 1:8770665/1‑101 (MQ=255) aCCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCcg < 1:6573505/101‑1 (MQ=255) cGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCcgcg < 1:1685885/101‑1 (MQ=255) gCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCgcgg > 1:4185144/1‑101 (MQ=255) ccggctgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTTAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCgcggc < 1:389220/98‑1 (MQ=255) ccTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCgcggc < 1:8969646/101‑1 (MQ=255) ctgctgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCgcggcg > 1:10359411/1‑101 (MQ=255) tgttgcgtgaGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCgcagcgc > 1:947470/10‑100 (MQ=255) tgctgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGt > 1:10156236/1‑101 (MQ=255) gctgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTc > 1:9104400/1‑101 (MQ=255) tgcgtgaGTAGGACACCATGATCATCGATGAGGCGCACGAACGCAGCCTGAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCcca < 1:13733812/95‑2 (MQ=255) tgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCt < 1:1297600/101‑1 (MQ=255) gATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTg < 1:4591834/101‑1 (MQ=255) aTGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGa > 1:9884238/1‑101 (MQ=255) aTGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGa > 1:11255415/1‑101 (MQ=255) tGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGAc > 1:12246987/1‑101 (MQ=255) gCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGAcc < 1:2545355/101‑1 (MQ=255) gCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGAcc < 1:12327147/101‑1 (MQ=255) cAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCt < 1:4683368/101‑1 (MQ=255) cAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCt < 1:13250012/101‑1 (MQ=255) aGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTa < 1:5003838/101‑1 (MQ=255) cGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTaaaaa > 1:1964739/1‑101 (MQ=255) gACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCCCAGATCTGAAGAt > 1:13081176/1‑101 (MQ=255) acacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAAta > 1:8204571/1‑100 (MQ=255) acacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATc > 1:3369969/1‑101 (MQ=255) acacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATc > 1:7400935/1‑101 (MQ=255) acacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATc > 1:10347842/1‑101 (MQ=255) cacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCa < 1:3446138/101‑1 (MQ=255) acTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCAt < 1:14278917/101‑1 (MQ=255) tATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTa < 1:10398723/101‑1 (MQ=255) aTCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTAt < 1:11321875/101‑1 (MQ=255) tCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATc < 1:769259/101‑1 (MQ=255) cATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCCCGGCGTCCTGACCTAAAAATAATTATcc > 1:780424/1‑100 (MQ=255) tGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcg < 1:11937513/101‑1 (MQ=255) aCGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcgcg < 1:226990/101‑1 (MQ=255) aCGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcgcg < 1:9688801/101‑1 (MQ=255) tgaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGa > 1:6151909/5‑101 (MQ=255) cGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGa > 1:11010295/1‑101 (MQ=255) gaggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGAc < 1:13126397/98‑1 (MQ=255) gAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGAc > 1:5439108/1‑101 (MQ=255) aggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGTGATATTTAAAGC‑ATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGAcg < 1:1473478/99‑2 (MQ=255) aggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGAcg < 1:8332963/99‑2 (MQ=255) aGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTa < 1:10451273/101‑1 (MQ=255) ggctcGAACGCATTCTGAATATCGATTTGTTGCTCGGGTATTTGAAAG‑AGTTGCTGCGGCGGCGGCGTGACCTAAAAAGCATTATCACTGCCTCGACTATc < 1:8322062/97‑1 (MQ=255) cgcACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATc > 1:5958377/1‑101 (MQ=255) cgcACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATc < 1:10880553/101‑1 (MQ=255) cgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTT‑AAAGCATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGACGAtt > 1:7761613/1‑100 (MQ=255) gcACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCg < 1:7675481/101‑1 (MQ=255) gcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGACGAttg > 1:10767205/1‑99 (MQ=255) cACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGa < 1:2771384/101‑1 (MQ=255) aCGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAc > 1:5908903/1‑101 (MQ=255) aCGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAc > 1:4133374/1‑101 (MQ=255) cGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAcc > 1:12805340/1‑101 (MQ=255) aaCGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCg > 1:7209837/1‑101 (MQ=255) aaCGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCg < 1:3827884/101‑1 (MQ=255) aCGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCgg < 1:2191070/101‑1 (MQ=255) aCGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCgg < 1:6763396/101‑1 (MQ=255) cGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGa > 1:4818771/1‑101 (MQ=255) gCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGaa > 1:11859002/1‑101 (MQ=255) cAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAAc < 1:1350946/101‑1 (MQ=255) gCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGc > 1:8697590/1‑101 (MQ=255) tGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCCCTTCCGCGACTATCGACCCGGAACGCttt < 1:1666208/101‑1 (MQ=255) tGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCttt < 1:1958141/101‑1 (MQ=255) tGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCttt < 1:1259595/101‑1 (MQ=255) gAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCtttt > 1:13238620/1‑101 (MQ=255) gAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCtttt < 1:635068/101‑1 (MQ=255) gAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCtttt > 1:6448814/1‑101 (MQ=255) tatCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTcgc > 1:8235622/1‑101 (MQ=255) atCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTcgcg < 1:6231760/101‑1 (MQ=255) atCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTcgcg < 1:463454/101‑1 (MQ=255) cGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGcc > 1:3065220/1‑101 (MQ=255) gATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCa > 1:3109216/1‑101 (MQ=255) ttttttGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACt > 1:10973188/1‑101 (MQ=255) tttttGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACtt > 1:4897578/1‑101 (MQ=255) tttttGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACtt < 1:3972389/101‑1 (MQ=255) ttttGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGGCCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACttt < 1:173777/101‑1 (MQ=255) tttGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTta < 1:1404412/101‑1 (MQ=255) tttGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTta < 1:213689/101‑1 (MQ=255) tttGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTta > 1:2493014/1‑101 (MQ=255) tttGCTCGCCTATTTGAAAG‑AGTGGCGGCCGCGGCGTCCTGACCTAAAAATCATTATCCCTTCCGCGATTA‑CCACCCGGAACGCTTTTCGCGCCACTTtaa < 1:12392007/101‑1 (MQ=255) ttGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaa < 1:9482048/101‑1 (MQ=255) tGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaat > 1:13962640/1‑101 (MQ=255) gCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaata < 1:6937323/101‑1 (MQ=255) gCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaata < 1:5834925/101‑1 (MQ=255) tCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTaataat > 1:1713050/1‑101 (MQ=255) tATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGcc > 1:1783127/1‑101 (MQ=255) aTTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCg > 1:11472901/1‑101 (MQ=255) gAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGatta < 1:2161207/101‑1 (MQ=255) aaaG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGattat < 1:9352145/101‑1 (MQ=255) aaG‑AGTTTCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACGATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGattatt < 1:5303600/101‑1 (MQ=255) ag‑agTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTg < 1:7947492/101‑1 (MQ=255) agTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGaa < 1:5631282/101‑1 (MQ=255) agTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGaa < 1:5213028/101‑1 (MQ=255) | TCCAGCAAGACCGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAG > NC_007779/1485319‑1485519 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |