| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,485,430 | G→A | 8.2% | R200Q (CGG→CAG) | hrpA → | ATP‑dependent helicase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 1,485,430 | 0 | G→A | 8.2% | 37.7 ‑0.2 ‑0.4 | 217 | R200Q (CGG→CAG) | hrpA | ATP‑dependent helicase |
| Reads supporting (aligned to +/- strand): new base (8/10): ref base (95/104): total (103/114) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.11e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.16e-01 | ||||||||||
Only 100 of 252 total aligned reads displayed.
CGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGG > NC_007779/1485330‑1485530 | gCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCgcgg > 1:4185144/1‑101 (MQ=255) ccggctgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTTAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCgcggc < 1:389220/98‑1 (MQ=255) ctgctgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCgcggcg > 1:10359411/1‑101 (MQ=255) ctgctgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCgcggcg > 1:2499697/1‑101 (MQ=255) tgttgcgtgaGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCgcagcgc > 1:947470/10‑100 (MQ=255) tgctgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGt > 1:12448213/1‑101 (MQ=255) gttgcgtgaGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCgcagcgcc > 1:11912476/9‑99 (MQ=255) gctgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTc > 1:9104400/1‑101 (MQ=255) tgcgtgaGTAGGACACCATGATCATCGATGAGGCGCACGAACGCAGCCTGAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCcca < 1:13733812/95‑2 (MQ=255) tgATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCt > 1:11596995/1‑101 (MQ=255) gATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTg < 1:4591834/101‑1 (MQ=255) aTGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGa > 1:9884238/1‑101 (MQ=255) tgaGTACGACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCCCAGatc > 1:1778138/3‑99 (MQ=255) gCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGAcc < 1:12327147/101‑1 (MQ=255) cAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCt < 1:4683368/101‑1 (MQ=255) aGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTa < 1:10393885/101‑1 (MQ=255) aGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTa < 1:5380702/101‑1 (MQ=255) aGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTa < 1:5003838/101‑1 (MQ=255) tACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTaaa < 1:8203966/101‑1 (MQ=255) aCGACACTATCATTATAGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTaaaa < 1:6041995/101‑1 (MQ=255) gACACCATCATCATCGATGAGGCGCACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCCCAGATCTGAAGAt > 1:13081176/1‑101 (MQ=255) acacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATc > 1:12007162/1‑101 (MQ=255) acacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATc > 1:7400935/1‑101 (MQ=255) acacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATc < 1:6156072/101‑1 (MQ=255) cacTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCa < 1:3446138/101‑1 (MQ=255) acTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCAt < 1:14278917/101‑1 (MQ=255) gtATCATTAATGACTAAGCGCGCCATGACATAATTAATCTCGGCTTCTTGCCAGGCTATTTTAAAG‑AGTTTCTTCCGCGGCGTCCTGACCGAAAAATCAtt < 1:6538454/100‑1 (MQ=255) aTCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTAt < 1:11321875/101‑1 (MQ=255) tCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATc < 1:769259/101‑1 (MQ=255) tattGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACtt > 1:6404124/1‑101 (MQ=255) aCGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcgcg < 1:9688801/101‑1 (MQ=255) aCGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcgcg < 1:226990/101‑1 (MQ=255) aCGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCcgcg < 1:10166025/101‑1 (MQ=255) cGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGa > 1:11010295/1‑101 (MQ=255) aggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGTGATATTTAAAGC‑ATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGAcg < 1:1473478/99‑2 (MQ=255) aggcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGAcg < 1:8332963/99‑2 (MQ=255) aaGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACt < 1:1906045/101‑1 (MQ=255) aGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTa < 1:10451273/101‑1 (MQ=255) gcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGACGAt < 1:3158456/101‑1 (MQ=255) gcgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTT‑AAAGCATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGACGAt > 1:9412782/1‑101 (MQ=255) cgcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTT‑AAAGCATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGACGAtt > 1:7761613/1‑100 (MQ=255) gcACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCg < 1:7675481/101‑1 (MQ=255) gcACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCg > 1:4388424/1‑101 (MQ=255) gcACGAACGCAGCCTCAACATCGACTTCCTGCTGGGATATTTAAAGC‑ATATTCTGCCGCAGCGCCCAGATCTGAAGATCATTATCACTTCGGCGACGAttg > 1:10767205/1‑99 (MQ=255) cACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGa > 1:801529/1‑101 (MQ=255) cACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGa < 1:1096495/101‑1 (MQ=255) aCGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAc > 1:4133374/1‑101 (MQ=255) cGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAcc > 1:12805340/1‑101 (MQ=255) gAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAccc > 1:1298576/1‑101 (MQ=255) gAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGAccc > 1:6308553/1‑101 (MQ=255) aaCGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCg > 1:243654/1‑101 (MQ=255) aaCGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCg < 1:3827884/101‑1 (MQ=255) aaCGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCg > 1:7209837/1‑101 (MQ=255) aCGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCgg < 1:6763396/101‑1 (MQ=255) aCGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCgg < 1:2191070/101‑1 (MQ=255) cGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGa > 1:4818771/1‑101 (MQ=255) cGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGa > 1:5947309/1‑101 (MQ=255) cAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAAc < 1:13203588/101‑1 (MQ=255) aGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACg < 1:1719308/101‑1 (MQ=255) aGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACg > 1:13259980/1‑101 (MQ=255) aGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACg < 1:7857152/101‑1 (MQ=255) agcTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGc < 1:8289692/99‑1 (MQ=255) tGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCCCTTCCGCGACTATCGACCCGGAACGCttt < 1:1666208/101‑1 (MQ=255) aaTATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTc < 1:13249684/101‑1 (MQ=255) tatCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTcgc > 1:8235622/1‑101 (MQ=255) atCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTcgcg < 1:463454/101‑1 (MQ=255) cGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGcc < 1:9503053/101‑1 (MQ=255) cGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGcc > 1:3065220/1‑101 (MQ=255) aTTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCAc > 1:1694727/1‑101 (MQ=255) aTTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCAc < 1:259200/101‑1 (MQ=255) tttttGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACtt > 1:4897578/1‑101 (MQ=255) tttttGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACtt < 1:3972389/101‑1 (MQ=255) tttGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTta < 1:1404412/101‑1 (MQ=255) tGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaat > 1:13962640/1‑101 (MQ=255) gCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaata < 1:6937323/101‑1 (MQ=255) gCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTtaata > 1:1961279/1‑101 (MQ=255) cGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATg < 1:5880585/101‑1 (MQ=255) cTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATgcgc > 1:2827722/1‑101 (MQ=255) gAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGatta < 1:2161207/101‑1 (MQ=255) aaaG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGattat < 1:9352145/101‑1 (MQ=255) aaaG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGattat > 1:11061166/1‑101 (MQ=255) aaG‑AGTTTCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACGATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGattatt < 1:5303600/101‑1 (MQ=255) aaG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGattatt < 1:12572441/101‑1 (MQ=255) ag‑agTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTg < 1:2084737/101‑1 (MQ=255) agTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGaa < 1:5631282/101‑1 (MQ=255) agTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGaa < 1:5213028/101‑1 (MQ=255) gctgcCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCCCCGATTATTGAAGtct > 1:12274229/1‑101 (MQ=255) ctgcCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGtctc < 1:13521061/101‑1 (MQ=255) gcCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCg < 1:8858696/101‑1 (MQ=255) gcCGCGGCGTCCTGACCTAAAAATCATCATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCg > 1:8476566/1‑101 (MQ=255) ccGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCgg < 1:11287490/101‑1 (MQ=255) cgcgGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGt > 1:10690146/1‑101 (MQ=255) gcggcgTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTc < 1:11696770/101‑1 (MQ=255) gcggcgTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTc > 1:1620367/1‑101 (MQ=255) gcggcgTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTc < 1:2143524/101‑1 (MQ=255) cggcgTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCg < 1:100778/101‑1 (MQ=255) cggcgTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCg > 1:706044/1‑101 (MQ=255) cggcgTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCg < 1:127386/101‑1 (MQ=255) ggcgTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCgg < 1:8699794/101‑1 (MQ=255) ggcgTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCgg > 1:3361400/1‑101 (MQ=255) | CGCCTGCTGATGCAGTACGACACTATCATTATTGACGAAGCGCACGAACGCAGCCTGAATATCGATTTTTTGCTCGGCTATTTGAAAG‑AGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCGACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTCGG > NC_007779/1485330‑1485530 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |