Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 1,486,073 G→C 5.1% L414L (CTG→CTC)  hrpA → ATP‑dependent helicase

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0077791,486,0730G→C 5.1% 29.6 ‑0.5 ‑1.0252L414L (CTG→CTC) hrpAATP‑dependent helicase
Reads supporting (aligned to +/- strand):  new base (8/5):  ref base (127/112):  total (135/117)
Fisher's exact test strand distribution p-value = 5.84e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.06e-01

Only 100 of 268 total aligned reads displayed.

GTGGTCGTGTGTCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGGCGTGC  >  NC_007779/1485973‑1486173
                                                                                                    |                                                                                                    
gtgGTCGTGTGTCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTg                                                                                                      >  1:1768259/1‑101 (MQ=255)
gtgGTCGTGTGTCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTg                                                                                                      <  1:471725/101‑1 (MQ=255)
 tgGTCGTGTGTCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTgg                                                                                                     >  1:2417835/1‑101 (MQ=255)
    tCGTGTGTCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCt                                                                                                  <  1:9393533/101‑1 (MQ=255)
    tCGTGTGTCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCt                                                                                                  <  1:12559083/101‑1 (MQ=255)
      gtgtgtCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCg                                                                                                <  1:2282407/101‑1 (MQ=255)
       tgtgtCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCgg                                                                                               >  1:13451509/1‑101 (MQ=255)
           tCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTAt                                                                                           >  1:11591809/1‑101 (MQ=255)
            ccGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTAtt                                                                                          <  1:5900654/101‑1 (MQ=255)
             cGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTAttt                                                                                         >  1:13801097/1‑101 (MQ=255)
              gAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTAtttt                                                                                        >  1:12394940/1‑101 (MQ=255)
               aaGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTTCGTACCAACCTGGCCTCGGTTATTTTg                                                                                       <  1:3650793/101‑1 (MQ=255)
               aaGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTg                                                                                       <  1:12142611/101‑1 (MQ=255)
                aGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGc                                                                                      <  1:1637994/101‑1 (MQ=255)
                 gggATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCa                                                                                     <  1:11012068/101‑1 (MQ=255)
                  ggATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAg                                                                                    <  1:8611089/101‑1 (MQ=255)
                    aTCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGAt                                                                                  <  1:7045023/101‑1 (MQ=255)
                     tCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTGTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATg                                                                                 >  1:13765472/1‑101 (MQ=255)
                      ggcgaTTCGTCTCTACAGCGAGGAGGAATTTCTCTCTCGCCCCGAGTTTACGGATCCGGAGATTCTGCGCACCAATCTCGCTTCGGTTGTACTGCAAATGa                                                                                <  1:10014330/97‑1 (MQ=255)
                      cTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGa                                                                                >  1:208309/1‑101 (MQ=255)
                       gcgaTTCGTCTCTACAGCGAGGAGGAATTTCTCTCTCGCCCCGAGTTTACGGATCCGGAGATTCTGCGCACCAATCTCGCTTCGGTTGTACTGCAAATGat                                                                               <  1:11587725/98‑2 (MQ=255)
                        gTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGAcc                                                                              >  1:12971493/1‑101 (MQ=255)
                         tATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACcg                                                                             >  1:4609922/1‑101 (MQ=255)
                          aTTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACcgc                                                                            <  1:8470025/101‑1 (MQ=255)
                          aTTCGTCTCTACAGCGAGGAGGAATTTCTCTCTCGCCCCGAGTTTACGGATCCGGAGATTCTGCGCACCAATCTCGCTTCGGTTGTACTGCAAATGatttc                                                                            >  1:11885205/1‑97 (MQ=255)
                           ttCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACcgcg                                                                           <  1:12891114/101‑1 (MQ=255)
                           ttCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACcgcg                                                                           >  1:7533902/1‑101 (MQ=255)
                             cGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCgct                                                                         >  1:317306/1‑101 (MQ=255)
                               tctcTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCgctgg                                                                       <  1:6112989/101‑1 (MQ=255)
                               tctcTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCgctgg                                                                       <  1:3896965/101‑1 (MQ=255)
                               tctcTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCgctgg                                                                       >  1:785448/1‑101 (MQ=255)
                                   tATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCgctggggct                                                                   >  1:9653584/1‑101 (MQ=255)
                                    aTTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCgctggggctg                                                                  <  1:4885331/101‑1 (MQ=255)
                                     ttCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCgctggggctgg                                                                 >  1:5676303/1‑101 (MQ=255)
                                      tCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCgctggggctggg                                                                <  1:3501581/101‑1 (MQ=255)
                                       ccGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGc                                                               >  1:12072624/1‑101 (MQ=255)
                                        cGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCg                                                              <  1:8976641/101‑1 (MQ=255)
                                          aaGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGat                                                            >  1:1116420/1‑101 (MQ=255)
                                             aCGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATc                                                         <  1:13040657/101‑1 (MQ=255)
                                               gATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGc                                                       >  1:3145148/1‑101 (MQ=255)
                                               gATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGc                                                       >  1:2602254/1‑101 (MQ=255)
                                                  ttCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATTACCGCGCTGGGGCTGGGCGATATCGCTGc                                                    <  1:10741681/101‑1 (MQ=255)
                                                  ttCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGc                                                    >  1:3525874/1‑101 (MQ=255)
                                                  ttCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGc                                                    >  1:3298488/1‑101 (MQ=255)
                                                  ttCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGc                                                    >  1:9839192/1‑101 (MQ=255)
                                                   tCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCg                                                   >  1:14195623/1‑101 (MQ=255)
                                                    ccTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGt                                                  >  1:7833785/1‑101 (MQ=255)
                                                     ctctCGCGCCCGGAGTTTACCGATCCGGAGATTCTGGGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGtt                                                 <  1:11662474/101‑1 (MQ=255)
                                                     ctctCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGtt                                                 >  1:12260559/1‑101 (MQ=255)
                                                      tctcGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTc                                                >  1:8565664/1‑101 (MQ=255)
                                                      tctcGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTc                                                <  1:1032849/101‑1 (MQ=255)
                                                        tcGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTccc                                              <  1:7416571/101‑1 (MQ=255)
                                                         cgcgCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCg                                             <  1:13232796/101‑1 (MQ=255)
                                                          gcgcCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGt                                            >  1:4169954/1‑101 (MQ=255)
                                                            gcCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGttt                                          >  1:6506548/1‑101 (MQ=255)
                                                               ccgAGTTTACGGATCCGGAGATTCTGCGCACCAATCTCGCTTCGGTTGTACTGCAAACGATTTCGTTGCGGCTTGGCGCGATTGAGGCCTTCCCCTTTGTc                                       >  1:13061072/3‑101 (MQ=255)
                                                                ggAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCg                                      >  1:11452193/1‑101 (MQ=255)
                                                                ggAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCg                                      >  1:11368995/1‑101 (MQ=255)
                                                                ggAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGATCCCGTTTGTCg                                      <  1:2699975/101‑1 (MQ=255)
                                                                cgAGTTTACGGATCCGGAGATTCTGCGCACCAATCTCGCTTCGGTTGTACTGCAAATGATTTCGTTGCGGCTTGGCGCGATTGAGGCCTTCCCCTTTGTcc                                      >  1:12724385/2‑100 (MQ=255)
                                                                 gAGTTTACGGATCCGGAGATTCTGCGCACCAATCTCGCTTCGGTTGTACTGCAAATGATTTCGTTGCGGCTTGGCGCGATTGAGGCCTTCCCCTTTGTcca                                     >  1:1191181/1‑99 (MQ=255)
                                                                 gAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGa                                     >  1:6885521/1‑101 (MQ=255)
                                                                  aGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGaa                                    <  1:5742522/101‑1 (MQ=255)
                                                                   gTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAg                                   <  1:5825314/101‑1 (MQ=255)
                                                                     ttACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCa                                 >  1:4082513/1‑101 (MQ=255)
                                                                       aCCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCAcc                               <  1:927109/101‑1 (MQ=255)
                                                                       aCCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCAcc                               >  1:10460305/1‑101 (MQ=255)
                                                                       aCCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCAcc                               >  1:1427428/1‑101 (MQ=255)
                                                                        ccGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCg                              >  1:4797085/1‑101 (MQ=255)
                                                                         cGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCgg                             <  1:4452727/101‑1 (MQ=255)
                                                                         cGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCgg                             <  1:656566/101‑1 (MQ=255)
                                                                         cGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCgg                             >  1:7358861/1‑101 (MQ=255)
                                                                          gATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGa                            >  1:7919797/1‑101 (MQ=255)
                                                                          gATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGAGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGa                            >  1:9111799/1‑101 (MQ=255)
                                                                           aTCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGAt                           >  1:8416592/1‑101 (MQ=255)
                                                                             ccGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATaa                         >  1:11323372/1‑101 (MQ=255)
                                                                             ccGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATaa                         >  1:5188338/1‑101 (MQ=255)
                                                                             ccGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATaa                         >  1:675631/1‑101 (MQ=255)
                                                                             ccGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATaa                         <  1:7729942/101‑1 (MQ=255)
                                                                              cGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATaaa                        >  1:10957811/1‑101 (MQ=255)
                                                                                gagaTTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACg                      <  1:6365021/101‑1 (MQ=255)
                                                                                 agaTTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGc                     <  1:14047698/101‑1 (MQ=255)
                                                                                      cTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAatat                >  1:3355012/1‑101 (MQ=255)
                                                                                       tGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATc               >  1:3784321/1‑101 (MQ=255)
                                                                                       tGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACAGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATc               <  1:13580099/101‑1 (MQ=255)
                                                                                        gCGCACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATcc              >  1:8035651/1‑101 (MQ=255)
                                                                                          gTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAg            >  1:10101424/1‑101 (MQ=255)
                                                                                          gTACCAACCTGGCCTCGGTTATCTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAg            >  1:6337342/1‑101 (MQ=255)
                                                                                           tACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAgg           <  1:2938123/101‑1 (MQ=255)
                                                                                             ccAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGAt         <  1:1533578/101‑1 (MQ=255)
                                                                                             ccAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGAt         >  1:8523113/1‑101 (MQ=255)
                                                                                              cAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATg        >  1:1960611/1‑101 (MQ=255)
                                                                                               aaCCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATgg       >  1:4937092/1‑101 (MQ=255)
                                                                                                aCCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGgc      <  1:8872800/101‑1 (MQ=255)
                                                                                                 ccTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGgcg     <  1:8225207/101‑1 (MQ=255)
                                                                                                 ccTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGgcg     >  1:5535342/1‑101 (MQ=255)
                                                                                                  cTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGgcgt    <  1:10581363/101‑1 (MQ=255)
                                                                                                  cTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGgcgt    <  1:9548280/101‑1 (MQ=255)
                                                                                                  cTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGgcgt    >  1:6003256/1‑101 (MQ=255)
                                                                                                    ggCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGgcgtgc  >  1:13348491/1‑101 (MQ=255)
                                                                                                    |                                                                                                    
GTGGTCGTGTGTCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGGCGTGC  >  NC_007779/1485973‑1486173

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.