Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 1,486,085 T→A 4.8% I418I (ATT→ATA)  hrpA → ATP‑dependent helicase

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0077791,486,0850T→A 4.8% 26.3 ‑0.5 0.0264I418I (ATT→ATA) hrpAATP‑dependent helicase
Reads supporting (aligned to +/- strand):  new base (8/5):  ref base (130/120):  total (139/125)
Fisher's exact test strand distribution p-value = 5.78e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00

Only 100 of 279 total aligned reads displayed.

CCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGGCGTGCGTCTGCTCGAAG  >  NC_007779/1485985‑1486185
                                                                                                    |                                                                                                    
 cGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTAttt                                                                                                     >  1:10915019/1‑101 (MQ=255)
  gAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTAtttt                                                                                                    <  1:7082115/101‑1 (MQ=255)
   aaGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTTCGTACCAACCTGGCCTCGGTTATTTTg                                                                                                   <  1:3650793/101‑1 (MQ=255)
     gggATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCa                                                                                                 <  1:12044859/101‑1 (MQ=255)
       gATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGa                                                                                               >  1:7044603/1‑101 (MQ=255)
        aTCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGAt                                                                                              >  1:9352222/1‑101 (MQ=255)
        aTCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGAt                                                                                              <  1:10988611/101‑1 (MQ=255)
        aTCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGAt                                                                                              <  1:1578471/101‑1 (MQ=255)
         tCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTGTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATg                                                                                             >  1:13765472/1‑101 (MQ=255)
         tCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATg                                                                                             <  1:1499317/101‑1 (MQ=255)
          ggcgaTTCGTCTCTACAGCGAGGAGGAATTTCTCTCTCGCCCCGAGTTTACGGATCCGGAGATTCTGCGCACCAATCTCGCTTCGGTTGTACTGCAAATGa                                                                                            <  1:10014330/97‑1 (MQ=255)
          cTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGa                                                                                            >  1:208309/1‑101 (MQ=255)
           tGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGAc                                                                                           <  1:11591447/101‑1 (MQ=255)
            cgaTTCATCTCTACGGCGAGGAGGAATTTCTCTCTCGCCCCGAGTGTACGGATCCGGAGATTCTGCGCACCAATCTCGCTTCGGTTGTACTGCAAATGatt                                                                                          <  1:2723697/99‑3 (MQ=255)
             gaTTCGTCTCTACAGCGAGGAGGAATTTCTCTCTCGCCCCGAGTTTACGGATCCGGAGATTCTGCGCACCAATCTCGCTTCGGTTGTACTGCAAATGattt                                                                                         >  1:627486/2‑98 (MQ=255)
               ttCGTCTCTACAGCGAGGAGGAATTTCTCTCTCGCCCCGAGTTTACGGATCCGGAGATTCTGCGCACCAATCTCGCTTCGGTTGTACTGCAAATGatttcg                                                                                       >  1:3476298/1‑96 (MQ=255)
                   tctcTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCgctgg                                                                                   <  1:3896965/101‑1 (MQ=255)
                   tctcTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCgctgg                                                                                   >  1:785448/1‑101 (MQ=255)
                       tATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCgctggggct                                                                               >  1:1173250/1‑101 (MQ=255)
                       tATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCgctggggct                                                                               >  1:9653584/1‑101 (MQ=255)
                        aTTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCgctggggctg                                                                              <  1:4885331/101‑1 (MQ=255)
                          tCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCgctggggctggg                                                                            <  1:8145777/101‑1 (MQ=255)
                           ccGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGc                                                                           <  1:6561177/101‑1 (MQ=255)
                           ccGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGc                                                                           <  1:13889510/101‑1 (MQ=255)
                             gAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGa                                                                         >  1:10413038/1‑101 (MQ=255)
                                  cggtttCCTCTCGCGCCCGGAGTTTACCGATGCGGAGATTCTGCGTTCCACCCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCg                                                                    <  1:468353/98‑1 (MQ=255)
                                  cGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCg                                                                    <  1:11098793/101‑1 (MQ=255)
                                   gATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGc                                                                   >  1:3145148/1‑101 (MQ=255)
                                    aTTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCt                                                                  >  1:12920907/1‑101 (MQ=255)
                                      ttCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGc                                                                >  1:9839192/1‑101 (MQ=255)
                                      ttCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGc                                                                >  1:3525874/1‑101 (MQ=255)
                                      ttCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGc                                                                >  1:3298488/1‑101 (MQ=255)
                                       tCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCg                                                               <  1:6446696/101‑1 (MQ=255)
                                        ccTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGt                                                              <  1:4738072/101‑1 (MQ=255)
                                        ccTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGt                                                              <  1:8792170/101‑1 (MQ=255)
                                        ccTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGt                                                              >  1:7833785/1‑101 (MQ=255)
                                         ctctCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGtt                                                             >  1:12260559/1‑101 (MQ=255)
                                         ctctCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGtt                                                             <  1:7549896/101‑1 (MQ=255)
                                          tctcGCGCCCGGAGTTTACCGATCCGGAGATTTTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTc                                                            >  1:5711678/1‑101 (MQ=255)
                                            tcGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTccc                                                          >  1:8620304/1‑101 (MQ=255)
                                             cgcgCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCg                                                         >  1:12506429/1‑101 (MQ=255)
                                             cgcgCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCg                                                         <  1:13232796/101‑1 (MQ=255)
                                              gcgcCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGt                                                        >  1:4169954/1‑101 (MQ=255)
                                              gcgcCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGt                                                        <  1:4852037/101‑1 (MQ=255)
                                                gcCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGttt                                                      <  1:12348925/101‑1 (MQ=255)
                                                   cGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTc                                                   >  1:5813548/1‑101 (MQ=255)
                                                   cGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTc                                                   >  1:5408853/1‑101 (MQ=255)
                                                    ggAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCg                                                  >  1:11452193/1‑101 (MQ=255)
                                                     gAGTTTACGGATCCGGAGATTCTGCGCACCAATCTCGCTTCGGTTGTACTGCAAATGATTTCGTTGCGGCTTGGCGCGATTGAGGCCTTCCCCTTTGTcca                                                 >  1:1191181/1‑99 (MQ=255)
                                                     gAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGa                                                 <  1:5015250/101‑1 (MQ=255)
                                                      aGTTTACGGATCCGGAGATTCTGCGCACCAATCTCGCTTCGGTTGTACTGCAAATGATTTCGTTGCGGCTTGGCGCGATTGAGGCCTTCCCCTTTGTccag                                                <  1:4598961/101‑4 (MQ=255)
                                                      aGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGaa                                                >  1:8489811/1‑101 (MQ=255)
                                                         ttACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCa                                             >  1:4082513/1‑101 (MQ=255)
                                                          tACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCAc                                            >  1:13043233/1‑101 (MQ=255)
                                                          tACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCAc                                            >  1:5559369/1‑101 (MQ=255)
                                                          tACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCAc                                            >  1:12985620/1‑101 (MQ=255)
                                                          tACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCAc                                            <  1:8607540/101‑1 (MQ=255)
                                                          tACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCAc                                            >  1:14142725/1‑101 (MQ=255)
                                                           aCCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCAcc                                           <  1:927109/101‑1 (MQ=255)
                                                            ccGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCg                                          >  1:1985907/1‑101 (MQ=255)
                                                              gATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACTGGa                                        >  1:7526783/1‑101 (MQ=255)
                                                              gATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGa                                        >  1:10068753/1‑101 (MQ=255)
                                                              gATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGa                                        >  1:11281660/1‑101 (MQ=255)
                                                              gATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGa                                        >  1:7919797/1‑101 (MQ=255)
                                                              gATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGAGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGa                                        >  1:9111799/1‑101 (MQ=255)
                                                               aTCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGAt                                       <  1:8937631/101‑1 (MQ=255)
                                                               aTCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGAt                                       >  1:8416592/1‑101 (MQ=255)
                                                                  cGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATaaa                                    <  1:1860550/101‑1 (MQ=255)
                                                                    gagaTTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACg                                  <  1:6365021/101‑1 (MQ=255)
                                                                     agaTTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGc                                 >  1:11490618/1‑101 (MQ=255)
                                                                          cTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAatat                            >  1:3355012/1‑101 (MQ=255)
                                                                           tGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATc                           >  1:3784321/1‑101 (MQ=255)
                                                                           tGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACAGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATc                           <  1:13580099/101‑1 (MQ=255)
                                                                            gCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATcc                          <  1:6639439/101‑1 (MQ=255)
                                                                             cGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCa                         <  1:12756783/101‑1 (MQ=255)
                                                                              gTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAg                        <  1:12092993/101‑1 (MQ=255)
                                                                              gTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAg                        <  1:2416051/101‑1 (MQ=255)
                                                                               tACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAgg                       <  1:2938123/101‑1 (MQ=255)
                                                                                 ccAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGAt                     >  1:6849532/1‑101 (MQ=255)
                                                                                  cAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATg                    >  1:1719804/1‑101 (MQ=255)
                                                                                   aaCCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATgg                   <  1:854152/101‑1 (MQ=255)
                                                                                   aaCCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATgg                   >  1:4937092/1‑101 (MQ=255)
                                                                                     ccTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGgcg                 <  1:8225207/101‑1 (MQ=255)
                                                                                     ccTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGgcg                 <  1:5842417/101‑1 (MQ=255)
                                                                                      cTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGgcgt                <  1:9548280/101‑1 (MQ=255)
                                                                                      cTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGgcgt                >  1:6003256/1‑101 (MQ=255)
                                                                                        ggCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGgcgtgc              >  1:13348491/1‑101 (MQ=255)
                                                                                        ggCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGgcgtgc              <  1:11358795/101‑1 (MQ=255)
                                                                                          ccTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGgcgtgcgt            >  1:4453537/1‑101 (MQ=255)
                                                                                           cTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGGCGTGCGTc           >  1:728851/1‑101 (MQ=255)
                                                                                           cTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGGCGTGCGTc           >  1:211580/1‑101 (MQ=255)
                                                                                            tCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGGCGTGCGTCt          >  1:13788038/1‑101 (MQ=255)
                                                                                             cGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGGCGTGCGTCTg         <  1:13114965/101‑1 (MQ=255)
                                                                                              ggTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGGCGTGCGTCTGc        <  1:608312/101‑1 (MQ=255)
                                                                                               gTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGGCGTGCGTCTGCt       >  1:11831974/1‑101 (MQ=255)
                                                                                                ttATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGGCGTGCGTCTGCTc      <  1:14235664/101‑1 (MQ=255)
                                                                                                ttATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGGCGTGCGTCTGCTc      <  1:10507533/101‑1 (MQ=255)
                                                                                                    tttGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGGCGTGCGTCTGCTCGAag  >  1:2590460/1‑101 (MQ=255)
                                                                                                    tttGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGGCGTGCGTCTGCTCGAag  >  1:323597/1‑101 (MQ=255)
                                                                                                    tttGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGGCGTGCGTCTGCTCGAag  <  1:7401344/101‑1 (MQ=255)
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CCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCGCGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGGCGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGGCGTGCGTCTGCTCGAAG  >  NC_007779/1485985‑1486185

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.