| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,540,001 | G→C | 3.7% | P189P (CCC→CCG) | narY ← | nitrate reductase 2 (NRZ) subunit beta |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 1,540,001 | 0 | G→C | 3.7% | 15.4 ‑1.1 ‑0.0 | 242 | P189P (CCC→CCG) | narY | nitrate reductase 2 (NRZ) subunit beta |
| Reads supporting (aligned to +/- strand): new base (6/3): ref base (114/119): total (120/122) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.31e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.97e-01 | ||||||||||
Only 100 of 248 total aligned reads displayed.
TGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCGC > NC_007779/1539901‑1540101 | aaaCGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGAtt > 1:2710152/1‑101 (MQ=255) aaCGTCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTg > 1:13450433/1‑101 (MQ=255) aaCGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTg > 1:6586137/1‑101 (MQ=255) aaCGCCAGCCACGCCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTg > 1:10275642/1‑101 (MQ=255) aCGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGTATTGa < 1:6006876/101‑1 (MQ=255) gccagccaCGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAgg > 1:907414/1‑101 (MQ=255) gccagccaCGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAgg > 1:8259754/1‑101 (MQ=255) ccagccaCGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGc > 1:5074115/1‑101 (MQ=255) cagccaCGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCa > 1:7804478/1‑101 (MQ=255) gccaCGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAgt < 1:12533897/101‑1 (MQ=255) caCGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAgtgt > 1:1272985/1‑101 (MQ=255) caCGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAgtgt > 1:2009337/1‑101 (MQ=255) aCGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGtt < 1:9413209/101‑1 (MQ=255) cGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTc < 1:12704321/101‑1 (MQ=255) ggCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCg < 1:12914192/101‑1 (MQ=255) ggCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCg > 1:12571591/1‑101 (MQ=255) gCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGc > 1:7920781/1‑101 (MQ=255) gCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGc < 1:8111266/101‑1 (MQ=255) gcggtCCTGGTCGACCAGCACAATGCCGTCTTCTGTGCGTTTGTACATCGCGCCCGATGGGCAGGAAGACACACAGGTCGGGTTCAAGCAGTGCTCAcaga > 1:1782104/5‑99 (MQ=255) ttATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAg < 1:12770410/101‑1 (MQ=255) ttATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAg > 1:10139357/1‑101 (MQ=255) tATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAgg > 1:5647913/1‑101 (MQ=255) tATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAgg > 1:1839040/1‑101 (MQ=255) ggtCCTGGTCGACCAGCACAATGCCGTCTTCTGTGCGTTTGTACATCGCGCCCGATGGGCAGGAAGGCACACAGGTCGGGTTCAAGCAGTGCTCAcagatg < 1:4002740/99‑5 (MQ=255) attgttgtcaatcaGCACAATGCCGTCTTCCGAGCGTTTGTAGATAGCGCCGCTTGGTCCCGGCGCCGCGCCGCTGGGATTTAGGCAGTGTTCGCACCGgc < 1:6563747/94‑1 (MQ=255) tCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGgcg < 1:6044810/101‑1 (MQ=255) tCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGgcg < 1:7339364/101‑1 (MQ=255) ccTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGgcgc < 1:685598/101‑1 (MQ=255) tGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCgg < 1:6099827/101‑1 (MQ=255) tGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCgg > 1:4399707/1‑101 (MQ=255) atcaatcaGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCa > 1:2986624/1‑101 (MQ=255) tcaatcaGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAg < 1:13278517/101‑1 (MQ=255) cgatcaGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAgg < 1:12091224/99‑1 (MQ=255) aatcaGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCCCGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGt < 1:259297/101‑1 (MQ=255) ccaGCACAATGCCGTCTTCTGTGCGTTTGTACATCGCGCCCGATGGGCAGGAAGACACACAGGTCGGGTTCAAGCAGTGCTCACAGATGCGAGGCAGGTag < 1:9668545/100‑2 (MQ=255) caGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTAca < 1:3782722/101‑1 (MQ=255) caGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTAca > 1:4553588/1‑101 (MQ=255) caGCACAATGCCGTCTTCTGTGCGTTTGTACATCGCGCCCGATGGGCAGGAAGACACACAGGTCGGGTTCAAGCAGTGCTCACAGATGCGAGGCAGGTaga < 1:6767344/101‑3 (MQ=255) aGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTAcat < 1:3418972/101‑1 (MQ=255) aGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTAcat < 1:1692434/101‑1 (MQ=255) cacaATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTAcatca < 1:13780431/101‑1 (MQ=255) acaATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTAcatcat > 1:13330479/1‑101 (MQ=255) aaTGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGa < 1:10072406/101‑1 (MQ=255) tGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAg < 1:6988525/101‑1 (MQ=255) gCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGGACATCATGAAgg > 1:9939854/1‑101 (MQ=255) cGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGgtg < 1:2391872/101‑1 (MQ=255) cttcttCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGttt < 1:6187733/101‑1 (MQ=255) cttcGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCa > 1:13947317/1‑101 (MQ=255) ttcGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCaa < 1:13248015/101‑1 (MQ=255) ttcGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCaa > 1:13662721/1‑101 (MQ=255) cgcgTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAAc < 1:11206314/101‑1 (MQ=255) cgcgTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAAc < 1:2800199/101‑1 (MQ=255) cgcgTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAAc < 1:7371297/101‑1 (MQ=255) cgcgTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAAc > 1:8640746/1‑101 (MQ=255) gcgTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACt < 1:12871548/101‑1 (MQ=255) gcgTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACt < 1:5448577/101‑1 (MQ=255) gcgTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGGACATCATGAAGGTGTTTTCAAACt > 1:9798908/1‑101 (MQ=255) gcgTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGGACATCATGAAGGTGTTTTCAAACt > 1:12047930/1‑101 (MQ=255) cgTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTg > 1:10417740/1‑101 (MQ=255) cgTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTg < 1:3458025/101‑1 (MQ=255) gTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGc < 1:14125262/101‑1 (MQ=255) gTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGc < 1:5830805/101‑1 (MQ=255) gTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGt > 1:8446528/1‑101 (MQ=255) aGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTAc > 1:10444866/1‑101 (MQ=255) gATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACa > 1:586904/1‑101 (MQ=255) gATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACa < 1:1948170/101‑1 (MQ=255) aTAGCGCCGCTTGGGCAGGCAGCCACGCAGCTGGGATTGAGGCAGTGGTCGCACAGGCGCGGCAGGCACATCATGAAGGTGTTTTCAAACTGCCCGTACAt > 1:2237597/1‑101 (MQ=37) tAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACAtc > 1:3207975/1‑101 (MQ=255) gccgcTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCt > 1:9256686/1‑101 (MQ=255) gccgcTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCt < 1:994850/101‑1 (MQ=255) ccgcTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCtt < 1:9004847/101‑1 (MQ=255) ccgcTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGGACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCtt > 1:10882319/1‑101 (MQ=255) gcTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCtttt < 1:3917040/101‑1 (MQ=255) gcTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCtttt < 1:7484204/101‑1 (MQ=255) gcTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCtttt < 1:11722301/101‑1 (MQ=255) ttGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGc > 1:12229747/1‑101 (MQ=255) tGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCa < 1:5925864/101‑1 (MQ=255) gggCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCAt > 1:7702931/1‑101 (MQ=255) gCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATgg > 1:3050486/1‑101 (MQ=255) gCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGGGTTTTCAAACTGCCCGTACATCTCCTTTTGCATgg > 1:12575204/1‑101 (MQ=255) cAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGc < 1:14291711/101‑1 (MQ=255) cAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGc > 1:6514914/1‑101 (MQ=255) gTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTAGATCTCCTTTTGCATGGCCTc < 1:3351981/101‑1 (MQ=255) gTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTc < 1:12897351/101‑1 (MQ=255) tCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCg > 1:4374545/1‑101 (MQ=255) gCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGaa > 1:8364083/1‑101 (MQ=255) cACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGt > 1:1143229/1‑101 (MQ=255) aCGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCTCGTACATCTCCTTTTGCATGGCCTCGAAGtt < 1:879175/101‑1 (MQ=255) aCGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGtt < 1:11086105/101‑1 (MQ=255) aCGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGtt > 1:10627529/1‑101 (MQ=255) cGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTg > 1:4109930/1‑101 (MQ=255) cGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTg > 1:1081373/1‑101 (MQ=255) cAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCg < 1:6897374/101‑1 (MQ=255) aGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCgg > 1:4217758/1‑101 (MQ=255) aGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCgg < 1:11999394/101‑1 (MQ=255) aGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGCGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCgg > 1:164041/1‑101 (MQ=255) aGCTGGGATTGAGGCAGTGATCACACAGGCACGGCAGGTACATCATGAAGGTGTTTTAAAACTGCCCGTCAACCTCCTTTTGCATGGCCGCGACGTTGCgg < 1:8538634/101‑1 (MQ=25) gCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGt < 1:2099907/101‑1 (MQ=255) cTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTc < 1:7566514/101‑1 (MQ=255) tGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTcg > 1:458985/1‑101 (MQ=255) | TGCACAAACGCCAGCCACGGCATTTATCCTGATCAATCAGCACAATGCCGTCTTCTTCGCGTTTGTAGATAGCGCCGCTTGGGCAGGTCGCCACGCAGCTGGGATTGAGGCAGTGTTCGCACAGGCGCGGCAGGTACATCATGAAGGTGTTTTCAAACTGCCCGTACATCTCCTTTTGCATGGCCTCGAAGTTGCGGTCGC > NC_007779/1539901‑1540101 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |