| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 1,864,990 | T→G | 7.6% | I169S (ATC→AGC) | gapA → | glyceraldehyde‑3‑phosphate dehydrogenase A |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 1,864,990 | 0 | T→G | 7.6% | 54.9 ‑1.5 ‑0.1 | 238 | I169S (ATC→AGC) | gapA | glyceraldehyde‑3‑phosphate dehydrogenase A |
| Reads supporting (aligned to +/- strand): new base (12/6): ref base (111/109): total (123/115) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.25e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.38e-01 | ||||||||||
Only 100 of 267 total aligned reads displayed.
TTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAG > NC_007779/1864890‑1865090 | ttCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGcatc‑at > 1:9330039/1‑101 (MQ=255)ttCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGcatc‑at < 1:355765/101‑1 (MQ=255) cGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCg < 1:9133200/101‑1 (MQ=255) cGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCg > 1:471172/1‑101 (MQ=255) gACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGa < 1:563685/101‑1 (MQ=255) gACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGa < 1:3034879/101‑1 (MQ=255) aCAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGaa > 1:12990296/1‑101 (MQ=255) aCAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGaa < 1:2275826/101‑1 (MQ=255) aCAAATATGCTGGCCAGGACATCGGTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGaa < 1:4166199/101‑1 (MQ=255) cAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAg < 1:7104107/101‑1 (MQ=255) aaaTTTGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAgg > 1:6344781/1‑101 (MQ=255) atatGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTc > 1:11385586/1‑101 (MQ=255) tatGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCt > 1:14184022/1‑101 (MQ=255) atGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCtg < 1:683421/101‑1 (MQ=255) tGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCtga > 1:2574488/1‑101 (MQ=255) cAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGaccac > 1:12732527/1‑101 (MQ=255) cAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGaccac > 1:12868094/1‑101 (MQ=255) aGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGaccacc > 1:5295585/1‑101 (MQ=255) ggACATCGTTTCCAACGCTTCCTGCACCACCAACCGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCg < 1:12259091/101‑1 (MQ=255) caaCATCATTTCGAACGCTTCTTGCACCACCAACTGCCTGGCTCCGATGGCTAAGGTTCTGGACGACAAGTTCGGCATCGAGCG‑CGGTCTCATGaccacca > 1:12034207/3‑100 (MQ=255) gACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGt < 1:8910005/101‑1 (MQ=255) cATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTc > 1:7830620/1‑101 (MQ=255) cATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTc < 1:5517195/101‑1 (MQ=255) cATCGTTTCCAACGCGTCCTGCACCACCAACTTCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTc < 1:754850/101‑1 (MQ=255) cATCATTTCGAACGCTTCTTGCACCACCAACTGCCTGGCTCCGATGGCTAAGGTTCTGGACGACAAGTTCTGCATCGAGCG‑CGGTCTCATGaccaccatcc < 1:14285996/101‑5 (MQ=255) aTCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCa > 1:306567/1‑101 (MQ=255) aTCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCa > 1:4482886/1‑101 (MQ=255) aTCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCa > 1:6517048/1‑101 (MQ=255) tCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCAc < 1:6666169/101‑1 (MQ=255) cGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACg < 1:1711086/101‑1 (MQ=255) cGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACg < 1:6051618/101‑1 (MQ=255) gcttCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGc > 1:13909953/3‑101 (MQ=255) ttCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGcta < 1:10405090/101‑1 (MQ=255) ttCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGcta < 1:4581127/101‑1 (MQ=255) ttCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGcta < 1:7192607/101‑1 (MQ=255) cAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGctacta > 1:7741218/1‑101 (MQ=255) cAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGctacta > 1:11232570/1‑101 (MQ=255) cAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGctacta > 1:12363238/1‑101 (MQ=255) aaCGCTTCTTGCACCACCAACTGCCTGGCTCCGATGGCTAAGGTTCTGGACGACAAGTTCGGCATCGAGCG‑CGGTCTCATGACCACCATCCACGcatacac > 1:12490633/1‑95 (MQ=255) aaCGCTTCTTGCACCACCAACTGCCTGGCTCCGATGGCTAAGGTTCTGGACGACAAGTTCGGCATCGAGCG‑CGGTCTCATGACCACCATCCACGcatacac > 1:13068495/1‑95 (MQ=255) aaCGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCtactac > 1:3841894/1‑101 (MQ=255) aCGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTAcc > 1:7843400/1‑101 (MQ=255) cGCTTCTTGCACCACCAACTGCCTGGCTCCGATGGCTAAGGTTCTGGACGACAAGTTCGGCATCGAGCG‑CGGTCTCATGACCACCATCCACGcatacaccg > 1:1415006/1‑93 (MQ=255) gCTTCTTGCACCACCAACTGCCTGGCTCCGATGGCTAAGGTTCTGGACGACAAGTTCGGCATCGAGCG‑CGGTCTCATGACCACCATCCACGcatacaccgg < 1:1483759/101‑10 (MQ=255) cTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCt > 1:9389369/1‑101 (MQ=255) ccTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACt < 1:1148943/101‑1 (MQ=255) ccTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACt < 1:11838715/101‑1 (MQ=255) cTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTc < 1:7358545/101‑1 (MQ=255) cTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTc > 1:8220178/1‑101 (MQ=255) cTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTc > 1:3695083/1‑101 (MQ=255) tGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCa > 1:7011286/1‑101 (MQ=255) tGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCa < 1:3364226/101‑1 (MQ=255) cgCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCa < 1:6235370/100‑1 (MQ=255) gCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAg < 1:13574842/101‑1 (MQ=255) caccacCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGa > 1:7456438/1‑101 (MQ=255) caccacCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGa < 1:5191477/101‑1 (MQ=255) ccaccaACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGaaa < 1:4913604/101‑1 (MQ=255) caccaACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGaaaa > 1:2047284/1‑101 (MQ=255) caACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCg < 1:8298402/101‑1 (MQ=255) aCTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGtt > 1:1911936/1‑101 (MQ=255) aCTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGtt < 1:14010742/101‑1 (MQ=255) aCTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGtt > 1:6260901/1‑101 (MQ=255) cTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTg > 1:13119689/1‑101 (MQ=255) gCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGAt > 1:9312704/1‑101 (MQ=255) gCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGAt > 1:9813018/1‑101 (MQ=255) ccTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATg > 1:1780669/1‑101 (MQ=255) tGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCATCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGc > 1:9754775/1‑101 (MQ=255) ggCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGcc < 1:1867952/101‑1 (MQ=255) gCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGccc > 1:5732315/1‑101 (MQ=255) tCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGt < 1:5823609/101‑1 (MQ=255) ccGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGtc < 1:11883330/101‑1 (MQ=255) cGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGtct > 1:6379435/1‑101 (MQ=255) cGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGtct > 1:43085/1‑101 (MQ=255) cGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGtct < 1:8596811/101‑1 (MQ=255) gCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGtctc > 1:587872/1‑101 (MQ=255) cTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCCCCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTca < 1:9549584/101‑1 (MQ=255) aGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACt < 1:275552/101‑1 (MQ=255) gTTATCAACGATAACTTC‑GCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACCCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTgg < 1:3929755/101‑1 (MQ=255) ttATCAACGATAACTTCGACATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTgg < 1:10622921/101‑1 (MQ=255) cGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGACCGTCTCACAAAGACTGGCgcggcg > 1:680683/1‑101 (MQ=255) gATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGcggcgg > 1:10782805/1‑101 (MQ=255) gATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGcggcgg < 1:10129047/101‑1 (MQ=255) atagcgtgggCATT‑ATCGAAGGTCTGATGCCCGCCTTTCGGGCTACTCCCGCTACTCAGAGACCCGTTGATGGCCGGTCTGACAAAGACTGGCCCggcggc < 1:9610549/93‑1 (MQ=255) aTAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCggcggc < 1:8004320/101‑1 (MQ=255) aTAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCggcggc > 1:5935338/1‑101 (MQ=255) aaCTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCcg > 1:3205650/1‑101 (MQ=255) aaCTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCcg > 1:13515354/1‑101 (MQ=255) cTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCcgcg < 1:1631851/101‑1 (MQ=255) ttCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCgcgg > 1:14092512/1‑101 (MQ=255) ttCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCgcgg > 1:7402700/1‑101 (MQ=255) ttCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCgcgg < 1:7247278/101‑1 (MQ=255) tCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCgcggc < 1:9058495/101‑1 (MQ=255) tCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCgcggc < 1:10036063/101‑1 (MQ=255) atc‑atcGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTc > 1:13432079/1‑101 (MQ=255) atc‑atcGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTc < 1:1836176/101‑1 (MQ=255) tc‑atcGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTcc > 1:1457499/1‑101 (MQ=255) tc‑atcGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTcc < 1:10459353/101‑1 (MQ=255) c‑atcGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTccc < 1:13737500/101‑1 (MQ=255) c‑atcGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTccc > 1:6974154/1‑101 (MQ=255) c‑atcGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTccc > 1:5302392/1‑101 (MQ=255) | TTCGACAAATATGCTGGCCAGGACATCGTTTCCAACGCTTCCTGCACCACCAACTGCCTGGCTCCGCTGGCTAAAGTTATCAACGATAACTTCGGCATC‑ATCGAAGGTCTGATGACCACCGTTCACGCTACTACCGCTACTCAGAAAACCGTTGATGGCCCGTCTCACAAAGACTGGCGCGGCGGCCGCGGCGCTTCCCAG > NC_007779/1864890‑1865090 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |