| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 2,251,514 | T→G | 7.8% | Q118P (CAG→CCG) | lysP ← | lysine transporter |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 2,251,514 | 0 | T→G | 7.8% | 57.5 ‑0.2 ‑1.8 | 230 | Q118P (CAG→CCG) | lysP | lysine transporter |
| Reads supporting (aligned to +/- strand): new base (8/10): ref base (102/110): total (110/120) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.10e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.63e-02 | ||||||||||
Only 100 of 257 total aligned reads displayed.
GCCACGAACTGAGATGTAGTTCAGCAGGAAGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCAAAGCCTTCTTCAACATAGTTCTGACCGT > NC_007779/2251414‑2251613 | gCCACGAACTGAGATGTAGTTCAGCAGGAAGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCagct < 1:3919762/101‑1 (MQ=255)gCCACGAACTGAGATGTAGTTCAGCAGGAAGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCagct < 1:1594044/101‑1 (MQ=255) cACGAACTGAGATGTAGTTCAGCAGGAAGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCagctga < 1:3373011/101‑1 (MQ=255) cACGAACTGAGATGTAGTTCAGCAGGAAGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCagctga < 1:3059708/101‑1 (MQ=255) gAACTGAGATGTAGTTCAGCAGGAAGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCagctgagct > 1:1687044/1‑101 (MQ=255) aaCTGAGATGTAGTTCAGCAGGAAGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCagctgagctg > 1:9965990/1‑101 (MQ=255) aaCTGAGATGTAGTTCAGCAGGAAGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCagctgagctg < 1:9609957/101‑1 (MQ=255) aCTGAGATGTAGTTCAGCAGGAAGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGc < 1:5136979/101‑1 (MQ=255) ctgtaaTGGAGTTCAGCGAGAGGGTAACGCCGGGAAATATCGCACGCCAGAACGAGCCCGGTGTATCCGGGAACCTCCATCTCATGCCCAGCTGAGCTGCa < 1:10168857/96‑1 (MQ=255) cTGAGATGTAGTTCAGCAGGAAGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCa > 1:2773600/1‑101 (MQ=255) cTGAGATGTAGTTCAGCAGGAAGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCa < 1:11782267/101‑1 (MQ=255) gagaTGTAGTTCAGCAGGAAGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAAc > 1:12273322/1‑101 (MQ=255) gaTGTAGTTCAGCAGGAAGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCa < 1:10952514/101‑1 (MQ=255) aTGTAGTTCAGCAGGAAGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAg < 1:2416041/101‑1 (MQ=255) tGTAGTTCAGCAGGAAGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAgg < 1:702437/101‑1 (MQ=255) aGTTCAGCAGGAAGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCa < 1:3674621/101‑1 (MQ=255) cagcagGAAGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACgg > 1:12662280/1‑101 (MQ=255) agcagGAAGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGc > 1:6067307/1‑101 (MQ=255) cagGAAGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGa > 1:7175892/1‑101 (MQ=255) cagGAAGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGa > 1:8387516/1‑101 (MQ=255) agGAAGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGAt > 1:7137753/1‑101 (MQ=255) agGAAGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGAt > 1:8247171/1‑101 (MQ=255) aaGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGt > 1:46875/1‑101 (MQ=255) aaGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGt > 1:13990728/1‑101 (MQ=255) gATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCa < 1:6920158/101‑1 (MQ=255) gATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCa > 1:8375620/1‑101 (MQ=255) aTAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCAc < 1:7673425/101‑1 (MQ=255) tAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCAcc < 1:8528043/101‑1 (MQ=255) aaCGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCg > 1:2160781/1‑101 (MQ=255) aCGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGc > 1:902815/1‑101 (MQ=255) aCGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGc < 1:5220115/101‑1 (MQ=255) aCGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGc < 1:4764189/101‑1 (MQ=255) aCGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGc > 1:836135/1‑101 (MQ=255) gCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGccc > 1:917516/1‑101 (MQ=255) cGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAg > 1:633945/1‑101 (MQ=255) cGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAg > 1:1493364/1‑101 (MQ=255) aGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGtt > 1:5659055/1‑101 (MQ=255) ggAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTg > 1:13592159/1‑101 (MQ=255) aacaacGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTa > 1:9695959/1‑101 (MQ=255) aacGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCa < 1:3126347/101‑1 (MQ=255) cGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCagt > 1:8685193/1‑101 (MQ=255) cGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCagt > 1:9778647/1‑101 (MQ=255) aCTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCagtagt < 1:4488470/101‑1 (MQ=255) cTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGtt < 1:6956360/101‑1 (MQ=255) cTCCAGATCCAGCCCGGTGGATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGtt < 1:14288357/101‑1 (MQ=255) tCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTc > 1:1968515/1‑101 (MQ=255) ccAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTcc < 1:3204826/101‑1 (MQ=255) cAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTcca < 1:13795668/101‑1 (MQ=255) cAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTcca > 1:12450930/1‑101 (MQ=255) aGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTccag > 1:10345528/1‑101 (MQ=255) aGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTccag > 1:11896062/1‑101 (MQ=255) aTCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTccagcc > 1:9212902/1‑101 (MQ=255) aTCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTccagcc > 1:2211282/1‑101 (MQ=255) ccAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTccagccca < 1:11361356/101‑1 (MQ=255) ccAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTccagccca < 1:13273796/101‑1 (MQ=255) ccAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTccagccca < 1:12387969/101‑1 (MQ=255) ccAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTccagccca < 1:10430882/101‑1 (MQ=255) cAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTccagcccag > 1:14131815/1‑101 (MQ=255) aGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTccagcccagc > 1:2118368/1‑101 (MQ=255) aGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTccagcccagc > 1:10294892/1‑101 (MQ=255) aGCCAGGTGTATCCGGGAACCACCAGCTCATGACCAGATGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTccagcccagc > 1:7512080/1‑101 (MQ=255) gCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAgcg < 1:3615544/101‑1 (MQ=255) ccGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGcgcg < 1:12215280/101‑1 (MQ=255) ccGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGcgcg < 1:489101/101‑1 (MQ=255) cGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGa < 1:9831823/101‑1 (MQ=255) cGGTGTATCCGGGAACCACCAGCTCATGACCAGATGAGCTGCAACCAGGTCAAAGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGa > 1:6501146/1‑101 (MQ=255) ggTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGaa < 1:804496/101‑1 (MQ=255) ggTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTACAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGaa < 1:3635924/101‑1 (MQ=255) gtgtATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAg < 1:12596245/101‑1 (MQ=255) gtATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCNCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGcc < 1:3783195/101‑1 (MQ=255) aTCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCaa > 1:3438735/1‑101 (MQ=255) tCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCaaa < 1:8728455/101‑1 (MQ=255) ccGGGAACCACCAGCTCATGACCAGATGAGCTGCAACCAGGTCACCGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCAAAg > 1:13702570/1‑101 (MQ=255) cGGGAACCAATAGCGCATCACCAGCGCAGCAGCGACGAGCTCTGCGGCCACAGTAATCGCCCAGTTAAACCAGTAGTTCCAGCCCATGGCAAAGCCGAAgg > 1:9469193/1‑100 (MQ=255) cGGGAACCAATAGCGCATCACCAGCGCAGCAGCGACGAGCTCTGCGGCCACAGTAATCGCCCAGTTAAACCAGTAGTTCCAGCCCATGGCAAAGCCGAAgg > 1:2966188/1‑100 (MQ=255) gggAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCAAAGcc < 1:9754573/101‑1 (MQ=255) gggAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCAAAGcc < 1:3511180/101‑1 (MQ=255) gggAACCAATAGCGCATCACCAGCGCAGCAGCGACGAGCTCTGCGGCCACAGTAATCGCCCAGTTAAACCAGTAGTTCCAGCCCATGGCAAAGCCGAAgga < 1:10714595/101‑3 (MQ=255) gggAACCAATAGCGCATCACCAGCGCAGCAGCGACGAGCTCTGCGGCCACAGTAATCGCCCAGTTAAACCAGTAGTTCCAGCCCATGGCAAAGCCGAAgga < 1:13492442/101‑3 (MQ=255) ggAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCAAAGCct < 1:420011/101‑1 (MQ=255) ggAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCAAAGCct < 1:2249276/101‑1 (MQ=255) aaCCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCAAAGCcttc > 1:1434680/1‑101 (MQ=255) ccaccaGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCAAAGCcttctt < 1:1306778/101‑1 (MQ=255) ccaccaGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCAAAGCcttctt < 1:10755855/101‑1 (MQ=255) ccaccaGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCAAAGCcttctt < 1:11261254/101‑1 (MQ=255) ccaataGCGCATCACCAGCGCAGCAGCGACGAGCTCTGCGGCCACAGTAATCGCCCAGTTAAACCAGTAGTTCCAGCCCATGGCAAAGCCGAAGGattctg < 1:13091526/96‑2 (MQ=255) caGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCAAAGCCTTCTTCAAc < 1:5408513/101‑1 (MQ=255) caGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCAAAGCCTTCTTCAAc < 1:1739576/101‑1 (MQ=255) cgcATCACCAGCGCAGCAGCGACGAGCTCTGCGGCCACAGTAATCGCCCAGTTAAACCAGTAGTTCCAGCCCATGGCAAAGCCGAAGGattctgagacgta > 1:5199470/3‑93 (MQ=255) cTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCCCCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCAAAGCCTTCTTCAACATa < 1:9878255/101‑1 (MQ=255) cTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCAAAGCCTTCTTCAACATa < 1:1768312/101‑1 (MQ=255) tCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCAAAGCCTTCTTCAACATAg < 1:5887472/101‑1 (MQ=255) gACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCAAAGCCTTCTTCAACATAGTTCt > 1:13153836/1‑101 (MQ=255) gccAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCAAAGCCTTCTTCAACATAGTTCTg < 1:11041006/100‑1 (MQ=255) ccAGATGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGCTCCAGCCCAGCGCGAAGCCAAAGCCTTCTTCAACATAGTTCTGa > 1:11378964/1‑101 (MQ=255) cAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCAAAGCCTTCTTCAACATAGTTCTGAc < 1:6566402/101‑1 (MQ=255) ctgagctgCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCAAAGCCTTCTTCAACATAGTTCTGACCGt < 1:9065192/101‑1 (MQ=255) ctgagctgCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCAAAGCCTTCTTCAACATAGTTCTGACCGt > 1:2624313/1‑101 (MQ=255) ctgagctgCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCAAAGCCTTCTTCAACATAGTTCTGACCGt > 1:7938485/1‑101 (MQ=255) ctgagctgCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCAAAGCCTTCTTCAACATAGTTCTGACCGt > 1:7474838/1‑101 (MQ=255) | GCCACGAACTGAGATGTAGTTCAGCAGGAAGATAACGCCGAGGAACAACGCACTCCAGATCCAGCCCGGTGTATCCGGGAACCACCAGCTCATGACCAGCTGAGCTGCAACCAGGTCAACGGCGATAGTCACCGCCCAGTTGTACCAGTAGTTCCAGCCCAGCGCGAAGCCAAAGCCTTCTTCAACATAGTTCTGACCGT > NC_007779/2251414‑2251613 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |