| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,314,457 | G→A | 12.2% | A471A (GCC→GCT) | infB ← | fused protein chain initiation factor 2, IF2 |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,314,457 | 0 | G→A | 12.2% | 70.6 ‑1.2 ‑0.1 | 221 | A471A (GCC→GCT) | infB | fused protein chain initiation factor 2, IF2 |
| Reads supporting (aligned to +/- strand): new base (10/17): ref base (93/101): total (103/118) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.11e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.64e-01 | ||||||||||
Only 100 of 253 total aligned reads displayed.
CTTCTGGTTTATCGATCTTGTTCACTGCAACCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGC > NC_007779/3314357‑3314557 | cTTCTGGTTTATCGATCTTGTTCACTGCAACCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGtcgtcg < 1:3879176/101‑1 (MQ=255)cTTCTGGTTTATCGATCTTGTTCACTGCAACCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGtcgtcg < 1:9676223/101‑1 (MQ=255) tCTGGTTTATCGATCTTGTTCACTGCAACCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGgc > 1:8024164/1‑101 (MQ=255) ggTTTATCGATCTTGTTCACTGCAACCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGgcagc < 1:5049144/101‑1 (MQ=255) gTTTATCGATCTTGTTCACTGCAACCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGgcagca < 1:4003354/101‑1 (MQ=255) ttATCGATCTTGTTCACTGCAACCACCACCGGTACCAGCGCCGCTTTCCCGTGCTGGAGTGCTTCGATGGCCTGCGGCATCACACCGTCGTCGGCAGcaac > 1:11236863/1‑101 (MQ=255) tATCGATCTTGTTCACTGCAACCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGcaaca > 1:9178294/1‑101 (MQ=255) aTCGATCTTGTTCACTGCAACCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGcaacaa > 1:8744954/1‑101 (MQ=255) cGATCTTGTTCACTGCAACCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAAcc > 1:11960931/1‑101 (MQ=255) cTTGTTCACTGCAACCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGa < 1:12390328/101‑1 (MQ=255) ttGTTCACTGCAACCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGAc < 1:6667709/101‑1 (MQ=255) tGTTCACTGCAACCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACt < 1:5246638/101‑1 (MQ=255) gTTCACTGCAACCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTa < 1:12759273/101‑1 (MQ=255) ttCACTGCAACCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTAc < 1:13322860/101‑1 (MQ=255) ttCACTGCAACCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTAc < 1:1518619/101‑1 (MQ=255) ttCACTGCAACCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTAc > 1:3747225/1‑101 (MQ=255) tCACTGCAACCACAACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACg > 1:9156370/1‑101 (MQ=255) cACTGCAACCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGa > 1:12466358/1‑101 (MQ=255) aCTGCAACCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGAt < 1:11337030/101‑1 (MQ=255) tGCAACCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGt > 1:9239741/1‑101 (MQ=255) tGCAACCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGt > 1:4510569/1‑101 (MQ=255) cAACCCCCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTcc < 1:2718726/101‑1 (MQ=255) aaCCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGTGGCATCACACCGTCGTCGGCAGCAACAATCAGGACTACGATGTCCg > 1:4792689/1‑101 (MQ=255) aaCCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGGTGtgat < 1:10932849/101‑4 (MQ=255) ccaccaccGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGtt > 1:8257566/1‑101 (MQ=255) ccaccaccGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGtt < 1:7989455/101‑1 (MQ=255) ccaccaccGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGtt < 1:4189145/101‑1 (MQ=255) ccaccaccGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGCCCGtt < 1:10601257/101‑1 (MQ=255) caccaccGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTg < 1:4612199/101‑1 (MQ=255) caccaccGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTg > 1:9486663/1‑101 (MQ=255) caccaccGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTg > 1:189626/1‑101 (MQ=255) caccaccGATACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTg > 1:8781772/1‑101 (MQ=255) caccGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCt > 1:6546345/1‑101 (MQ=255) caccGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCt > 1:2027088/1‑101 (MQ=255) ccGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTgc > 1:6785518/1‑101 (MQ=255) ccGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTgc < 1:5874952/101‑1 (MQ=255) cGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTgcg > 1:6029004/1‑101 (MQ=255) ggcaCCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTacgc > 1:9297060/4‑101 (MQ=255) gTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGca < 1:14168500/101‑1 (MQ=255) gTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGca < 1:6961048/101‑1 (MQ=255) tACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGcac < 1:1321994/101‑1 (MQ=255) tACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGcac > 1:1575680/1‑101 (MQ=255) cTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGcaccac > 1:3298483/1‑101 (MQ=255) cTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGcaccac < 1:2607803/101‑1 (MQ=255) cgccgcTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAg > 1:2299975/1‑101 (MQ=255) gcTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACg < 1:8107174/101‑1 (MQ=255) gcTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACg > 1:5025152/1‑101 (MQ=255) cTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGc > 1:3701372/1‑101 (MQ=255) cTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGc > 1:10797804/1‑101 (MQ=255) tCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCAtt < 1:11746069/101‑1 (MQ=255) gcgTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGa > 1:14015030/1‑101 (MQ=255) tGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGt < 1:7659044/101‑1 (MQ=255) tGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGt < 1:9096449/101‑1 (MQ=255) tGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGt < 1:10253594/101‑1 (MQ=255) tGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGt < 1:13366428/101‑1 (MQ=255) tGCGGGATTGCTTCGATGGTCTGCTGCATCACACCGACGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCTCACGACGAGCAAGCATTGAAga > 1:7013009/1‑100 (MQ=255) gCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTa > 1:7525866/1‑101 (MQ=255) cTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTaa < 1:11397048/101‑1 (MQ=255) tGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTaaa > 1:14270570/1‑101 (MQ=255) tGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTaaa > 1:11191172/1‑101 (MQ=255) tGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTaaa < 1:12252469/101‑1 (MQ=255) aTTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAAcgc < 1:8571273/101‑1 (MQ=255) aTTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAAcgc < 1:7897691/101‑1 (MQ=255) aTTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAAcgc < 1:3191239/101‑1 (MQ=255) tGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGTAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACgcgg > 1:13607224/1‑101 (MQ=255) gCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACgcggc < 1:9646134/101‑1 (MQ=255) ttCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGt < 1:2373861/101‑1 (MQ=255) tcaaccgTCTGCGGCATGACGCCGTCATCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTTGGCACCACGAGCACGCATGGCGGTAAACGCCTCGTg > 1:10011713/7‑101 (MQ=255) caaccgTCTGCGGCATGACGCCGTCATCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTTGGCACCACGAGCACGCATGGCGGTAAACGCATCGTga > 1:8450041/6‑100 (MQ=255) gATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGcc < 1:863794/101‑1 (MQ=255) aTGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGccc < 1:568893/101‑1 (MQ=255) tGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGcccc < 1:10053387/101‑1 (MQ=255) ccgTCTGCGGCATGACGCCGTCATCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTTGGCACCACGAGCACGCATGGCGGTAAACGCCTCGTGacca > 1:2925466/3‑100 (MQ=255) cgTCTGCGGCATGACGCCGTCATCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTTGGCACCACGAGCACGCATGGCGGTAAACGCCTCGTGaccag > 1:5443914/2‑99 (MQ=255) tCTGCGGCATGACGCCGTCATCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTTGGCACCACGAGCACGCATGGCGGTAAACGCCTCGTGACCAggg > 1:6386671/1‑101 (MQ=255) tCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCggg > 1:496587/1‑101 (MQ=255) tGCGGCATGACGCCGTCATCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTTGGCACCACGAGCACGCATGGCGGTAAACGCCTCGTGACCAGGGgt < 1:7800497/101‑1 (MQ=255) tGCGGCATGACGCCGTCATCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTTGGCACCACGAGCACGCATGGCGGTAAACGCCTCGTGACCAGGGgt > 1:5659555/1‑101 (MQ=255) tGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGgt < 1:13170331/101‑1 (MQ=255) gCGGCATGACGCCGTCATCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTTGGCACCACGAGCACGCATGGCGGTAAACGCCTCGTGACCAGGGgta > 1:10203515/1‑100 (MQ=255) cGGCATGACGCCGTCATCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTTGGCACCACGAGCACGCATGGCGGTAAACGCCTCGTGACCAGGGgtat < 1:11605002/101‑3 (MQ=255) ggCATGACGCCGTCATCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTTGGCACCACGAGCACGCATGGCGGTAAACGCCTCGTGACCAGGGGTATc < 1:10704427/101‑1 (MQ=255) cATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCa < 1:663268/101‑1 (MQ=255) acgccGTCATCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTTGGCACCACGAGCACGCATGGCGGTAAACGCCTCGTGACCAGGGGTATCCAAGaa < 1:6307906/98‑1 (MQ=255) acacCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGaa < 1:73291/101‑1 (MQ=255) acacCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGaa > 1:4298977/1‑101 (MQ=255) acacCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACAAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGaa < 1:4912232/101‑1 (MQ=255) cgccGTCATCAGCTGCAACAACCAGAATCGCGATATCGGTCGACTTGGCACCACGAGCACGCATGGCGGTAAACGCCTCGTGACCAGGGGTATCCAAGAAg < 1:887741/99‑1 (MQ=255) cgtcgtCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTg < 1:7383130/101‑1 (MQ=255) cgtcgtCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTg < 1:612161/101‑1 (MQ=255) cgtcgtCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTg > 1:1115082/1‑101 (MQ=255) gtcgtcGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGa > 1:4711179/1‑101 (MQ=255) tcgtcgGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGAt < 1:9446879/101‑1 (MQ=255) tcgtcgGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGAt < 1:10623057/101‑1 (MQ=255) gtcgGCAGCAACAACCAGGACTATGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCa > 1:9799698/1‑101 (MQ=255) tcgGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCTGGGGTGTCCAGGAAGGTGATCAt > 1:3514463/1‑101 (MQ=255) cgGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATg < 1:1646326/101‑1 (MQ=255) cgGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATg > 1:11985054/1‑101 (MQ=255) cgGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATg > 1:10860217/1‑101 (MQ=255) ggCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGc < 1:3328875/101‑1 (MQ=255) | CTTCTGGTTTATCGATCTTGTTCACTGCAACCACCACCGGTACCTGCGCCGCTTTCGCGTGCTGGATTGCTTCGATGGTCTGCGGCATCACACCGTCGTCGGCAGCAACAACCAGGACTACGATGTCCGTTGCCTGCGCACCACGAGCACGCATTGAAGTAAACGCGGCGTGCCCCGGGGTGTCCAGGAAGGTGATCATGC > NC_007779/3314357‑3314557 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |