| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 80,454 | A→G | 11.1% | F137F (TTT→TTC) | leuC ← | 3‑isopropylmalate isomerase subunit, dehydratase component |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 80,454 | 0 | A→G | 11.1% | 68.8 ‑0.2 ‑0.8 | 235 | F137F (TTT→TTC) | leuC | 3‑isopropylmalate isomerase subunit, dehydratase component |
| Reads supporting (aligned to +/- strand): new base (15/11): ref base (113/96): total (128/107) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.36e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.46e-01 | ||||||||||
Only 100 of 251 total aligned reads displayed.
GGACTTCAATTTTCATGGTTTTTGCGCGGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGAT > NC_007779/80354‑80554 | gACTTCAATTTTCATGGTTTTTGCGCGGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCaa < 1:5635318/101‑1 (MQ=255) aCTTCAATTTTCATGGTTTTTGCGCGGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCaaa > 1:1897576/1‑101 (MQ=255) cTTCAATTTTCATGGTTTTTGCGCGGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAAc < 1:10508792/101‑1 (MQ=255) tCAATTTTCATGGTTTTTGCGCGGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAAcgc < 1:4324905/101‑1 (MQ=255) tCAATTTTCATGGTGTTTGCGCGGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAAcgc < 1:460286/101‑1 (MQ=255) cAATTTTCATGGTTTTTGCGCGGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAAcgcg > 1:6884234/1‑101 (MQ=255) cAATTTTCATGGTTTTTGCGCGGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAAcgcg < 1:8320908/101‑1 (MQ=255) cAATTTTCATGGTTTTTGCGCGGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAAcgcg < 1:11353871/101‑1 (MQ=255) aaTTTTCATGGTTTTTGCGCGGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACgcgc > 1:6499379/1‑101 (MQ=255) aaTTTTCATGGTTTTTGCGCGGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACgcgc > 1:13916776/1‑101 (MQ=255) aaTTTTCATGGTTTTTGCGCGGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACgcgc > 1:2413844/1‑101 (MQ=255) ttttCATGGTTTTTGCGCGGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCg < 1:9593888/101‑1 (MQ=255) ttttCATGGTTTTTGCGCGGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCg > 1:10288821/1‑101 (MQ=255) ttttCATGGTTTTTGCGCGGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCg < 1:10818603/101‑1 (MQ=255) ttttCATGGTTTTTGCGCGGCCCTGTGTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCg < 1:1566272/101‑1 (MQ=255) tttCATGGTTTTTGCGCGGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCgt < 1:5458674/101‑1 (MQ=255) cATGGTTTTTGCGCGGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCgtggg > 1:5004315/1‑101 (MQ=255) tGGTTTTTGCGCGGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCgtgggtg > 1:3777249/1‑101 (MQ=255) tttttGCGCGGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCg < 1:7935157/101‑1 (MQ=255) tttttGCGCGGCCCGGTTTCAGGGTTTGCGTTCCCAGTGCGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCg < 1:208473/101‑1 (MQ=255) tttGCGCGGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGt < 1:14045843/101‑1 (MQ=255) ttGCGCGGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTa < 1:13817873/101‑1 (MQ=255) ttGCGCGGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTa < 1:6140546/101‑1 (MQ=255) gcgcGGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATg < 1:11313702/101‑1 (MQ=255) gcgGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCg > 1:3418774/1‑101 (MQ=255) cgGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGa > 1:2727743/1‑101 (MQ=255) gCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGt > 1:697587/1‑101 (MQ=255) cttcagtggcAGGGTCTGGGTAGCCAGAACGTGCTCAACTTCGGAAGTACCGATACCAAAGGCCATCGCGCCGAAAGCACCGTGCGTTGCAGTGTGGGAGt < 1:9263634/92‑1 (MQ=255) ccTGTTTCAGGGTTTGCGGTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGAGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTcg < 1:11766208/101‑1 (MQ=255) cTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTcgc > 1:5486388/1‑101 (MQ=255) gtggcAGGGTCTGGGTAGCCAGAACGTGCTCAACTTCGGAAGTACCGATACCAAAGGCCATCGCGCCGAAAGCACCGTGCGTTGCAGTGTGGGAGTcacca < 1:6620623/97‑2 (MQ=255) tttCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTcgccgc > 1:12776834/1‑101 (MQ=255) ttCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCa < 1:10450214/101‑1 (MQ=255) tCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAg < 1:1540364/101‑1 (MQ=255) tCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAg > 1:9740207/1‑101 (MQ=255) cAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGa > 1:520031/1‑101 (MQ=255) cAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGa > 1:12196346/1‑101 (MQ=255) aGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGAc < 1:4198597/101‑1 (MQ=255) aGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAAAc > 1:11722515/1‑101 (MQ=255) aGGGTCTGGGTAGCCAGAACGTGCTCAACTTCGGAAGTACCGATACCAAAGGCCATCGCGCCGAAAGCACCGTGCGTTGCAGTGTGGGAGTCACCACAGAc > 1:10661322/1‑101 (MQ=255) gggTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACa < 1:7253723/101‑1 (MQ=255) gggTCTGGGTAGCCAGAACGTGCTCAACTTCGGAAGTACCGATACCAAAGGCCATCGCGCCGAAAGCACCGTGCGTTGCAGTGTGTGAGTCACCACAGACa < 1:451915/101‑1 (MQ=255) gggTCTGGGTAGCCAGAACGTGCTCAACTTCGGAAGTACCGATACCAAAGGCCATCGCGCCGAAAGCACCGTGCGTTGCAGTGTGGGAGTCACCACAGACa > 1:142709/1‑101 (MQ=255) ggTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACaa < 1:752060/101‑1 (MQ=255) tttGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATg > 1:6801151/1‑101 (MQ=255) ttGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATgg < 1:7129765/101‑1 (MQ=255) ttGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATgg > 1:12062592/1‑101 (MQ=255) gCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTc > 1:6611895/1‑101 (MQ=255) cGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCa > 1:4048548/1‑101 (MQ=255) cGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCa < 1:3294513/101‑1 (MQ=255) cGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCa > 1:11931441/1‑101 (MQ=255) gTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCAt < 1:279955/101‑1 (MQ=255) gTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCAt < 1:13611345/101‑1 (MQ=255) tagCCAGAACGTGCTCAACTTCGGAAGTACCGATACCAAAGGCCATCGCGCCGAAAGCACCGTGCGTTGCAGTGTGGGAGTCACCACAGACAACGGtggtg > 1:11154468/3‑97 (MQ=255) ccAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATcccc > 1:311522/1‑101 (MQ=255) ccAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATcccc < 1:5828694/101‑1 (MQ=255) ccAGAACGTGCTCAACTTCGGAAGTACCGATACCAAAGGCCATCGCGCCGAAAGCACCGTGCGTTGCAGTGTGGGAGTCACCACAGACAACGGtggtgccc < 1:12875531/101‑8 (MQ=255) cAGAACGTGCTCAACTTCGGAAGTACCGATACCAAAGGCCATCGCGCCGAAAGCACCGTGCGTTGCAGTGTGGGAGTCACCACAGACAACGGtggtgcccg < 1:2131354/101‑9 (MQ=255) aGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCgg > 1:1094935/1‑101 (MQ=255) gaaCGTGCTCAACTTCGGAAGTACCGATACCAAAGGCCATCGCGCCGAAAGCACCGTGCGTTGCAGTGTGGGAGTCACCACAGACAACGGTGGTGCCCggt > 1:1703274/3‑100 (MQ=255) tACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCa < 1:1998496/101‑1 (MQ=255) tACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCa > 1:9097281/1‑101 (MQ=255) aCGTGCTCAACTTCGGAAGTACCGATACCAAAGGCCATCGCGCCGAAAGCACCGTGCGTTGCAGTGTGGGAGTCACCACAGACAACGGTGGTGCCCggttg > 1:3072108/1‑98 (MQ=255) cGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCGGCAGACAATGGTCATCCCCGGCAAg < 1:10164055/101‑1 (MQ=255) cGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAg < 1:6355831/101‑1 (MQ=255) cGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAg < 1:12465367/101‑1 (MQ=255) tCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGAc < 1:13204133/101‑1 (MQ=255) aaCTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGc > 1:5761728/1‑101 (MQ=255) aaCTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGc > 1:5272783/1‑101 (MQ=255) cTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGccc < 1:5552177/101‑1 (MQ=255) ttCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCt < 1:8504478/101‑1 (MQ=255) tCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTg < 1:7821468/101‑1 (MQ=255) cGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGt < 1:13128243/101‑1 (MQ=255) ggAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGtt > 1:4951993/1‑101 (MQ=255) aaGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTcc > 1:12545495/1‑101 (MQ=255) aGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCg < 1:6272386/101‑1 (MQ=255) gTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCgg > 1:182374/1‑101 (MQ=255) tGCCGAGACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGc < 1:13332177/101‑1 (MQ=255) cGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGcccc > 1:8732753/1‑101 (MQ=255) tACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCAtt < 1:6059231/101‑1 (MQ=255) ccAAAGCCCAGTGCGCAAACCGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTAc < 1:8153123/101‑1 (MQ=255) cAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACg > 1:3919570/1‑101 (MQ=255) cAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACg > 1:2293928/1‑101 (MQ=255) aaaGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGt > 1:14267750/1‑101 (MQ=255) aaaGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGt < 1:11852674/101‑1 (MQ=255) aGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTgg > 1:13546330/1‑101 (MQ=255) cAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGa > 1:7504934/1‑101 (MQ=255) aGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCACTGTTCCGGCCCCATTACGTGGACGAt > 1:8809285/1‑101 (MQ=255) tGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATcc > 1:25303/1‑101 (MQ=255) cgcCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATcccc > 1:10031259/1‑101 (MQ=255) cgcCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATcccc < 1:3574369/101‑1 (MQ=255) gcCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCt < 1:2215756/101‑1 (MQ=255) gcCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCt < 1:8223509/101‑1 (MQ=255) gcCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCt > 1:8569860/1‑101 (MQ=255) gcCAAACGCGCCGTGGGTGGCGGCATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCt > 1:9321048/1‑101 (MQ=255) ccAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTg < 1:11015886/101‑1 (MQ=255) ccAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTg > 1:4716963/1‑101 (MQ=255) cAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGa > 1:12717105/1‑101 (MQ=255) aaaCGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGAt > 1:769753/1‑101 (MQ=255) aaaCGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGAt < 1:14150357/101‑1 (MQ=255) | GGACTTCAATTTTCATGGTTTTTGCGCGGCCCTGTTTCAGGGTTTGCGTTGCCAGTACGTGTTCAACTTCGGAAGTGCCGATACCAAAGGCCAGTGCGCCAAACGCGCCGTGGGTGGCGGTATGCGAGTCGCCGCAGACAATGGTCATCCCCGGCAAGGTGACGCCCTGTTCCGGCCCCATTACGTGGACGATCCCCTGAT > NC_007779/80354‑80554 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |