| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,326,064 | C→T | 11.4% | A243T (GCG→ACG) | ftsH ← | protease, ATP‑dependent zinc‑metallo |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,326,064 | 0 | C→T | 11.4% | 80.1 ‑1.0 ‑0.1 | 290 | A243T (GCG→ACG) | ftsH | protease, ATP‑dependent zinc‑metallo |
| Reads supporting (aligned to +/- strand): new base (13/20): ref base (125/132): total (138/152) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.58e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.61e-01 | ||||||||||
Only 100 of 308 total aligned reads displayed.
TTCAGAGTCTGTTCACGTTCATCGTGACCACCGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTTTC > NC_007779/3325964‑3326164 | ttCAGAGTCTGTTCACGTTCATCGTGACCACCGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGc < 1:4260379/101‑1 (MQ=255)ttCAGAGTCTGTTCACGTTCATCGTGACCACCGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGc > 1:5144913/1‑101 (MQ=255) tCAGAGTCTGTTCACGTTCATCGTGACCACCGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCt > 1:11563044/1‑101 (MQ=255) gagTCTGTTCACGTTCATCGTGACCACCGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTtt‑c > 1:9684631/1‑101 (MQ=255) gTCTGTTCACGTTCATCGTGACCACCGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTtt‑ctt < 1:10053652/101‑1 (MQ=255) tCTGTTCACGTTCATCGTGACCACCGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTtt‑cttc < 1:2323520/101‑1 (MQ=255) tCTGGTCACGTTCCTGGTGACTAACGCCCAGACCAGCGCCACGCCGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCCCGGTGCCGCTtt‑cttc > 1:9315492/1‑101 (MQ=255) gTTCACGTTCATCGTGACCACCGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGcc > 1:9479220/1‑101 (MQ=255) gTTCACGTTCATCGTGACCACCGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGcc < 1:6525467/101‑1 (MQ=255) tCACGTTCATCGTGACCACCGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTg < 1:2651084/101‑1 (MQ=255) tCACGTTCATCGTGACCACCGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTg < 1:4008360/101‑1 (MQ=255) cACGTTCATCGTGACCACCGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGt < 1:11668454/101‑1 (MQ=255) aCGTTCATCGTGACCACCGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGtt < 1:2078596/101‑1 (MQ=255) aCGTTCATCGTGACCACCGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGtt > 1:5921767/1‑101 (MQ=255) cGTTCATCGTGACCACCGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTc > 1:11196242/1‑101 (MQ=255) gTTCATCGTGACCACCGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCg < 1:2582607/101‑1 (MQ=255) gTTCATCGTGACCACCGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCg < 1:10651798/101‑1 (MQ=255) aTCGTGACCGCCGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACa < 1:13603267/101‑1 (MQ=255) tCGTGACCACCGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACAt < 1:8089261/101‑1 (MQ=255) gTGACCACCGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGt < 1:10393601/101‑1 (MQ=255) gACCACCGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCa > 1:8239398/1‑101 (MQ=255) ccaccGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACg > 1:6108088/1‑101 (MQ=255) ccaccGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACg < 1:2898999/101‑1 (MQ=255) caccGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGa > 1:4288458/1‑101 (MQ=255) cccAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACg > 1:13078797/1‑101 (MQ=255) ccAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACgg > 1:5411866/1‑101 (MQ=255) ccAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACgg > 1:3439922/1‑101 (MQ=255) cAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACggg > 1:12659452/1‑101 (MQ=255) aGACCAGCGCCACGCTGGCGGGCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGa < 1:7596493/101‑1 (MQ=255) aGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGa < 1:4942628/101‑1 (MQ=255) gACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGAt < 1:6926242/101‑1 (MQ=255) ccAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGc < 1:8942564/101‑1 (MQ=255) cAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCAACGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCa > 1:13899819/1‑101 (MQ=255) cACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCcaca < 1:9901728/101‑1 (MQ=255) ccGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCacac < 1:11314848/100‑1 (MQ=255) gCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACcg > 1:11913979/1‑101 (MQ=255) gCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACcg < 1:14231159/101‑1 (MQ=255) gcggcCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACcgacga > 1:171456/1‑101 (MQ=255) cggcCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGaa > 1:1945928/1‑101 (MQ=255) cggcCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGaa > 1:10941099/1‑101 (MQ=255) ggcCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAAc < 1:6015184/101‑1 (MQ=255) gcCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGGGCCGCTTT‑CTTCGCCTGTTCGAACATCTCACGAACACGGGATGCACCCACACCGACGAACa > 1:5200847/1‑101 (MQ=255) ccTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACAt > 1:7792876/1‑101 (MQ=255) cTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACAtt > 1:7396439/1‑101 (MQ=255) cTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACAtt > 1:8573872/1‑101 (MQ=255) tACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACAttt > 1:2814785/1‑101 (MQ=255) cGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCt > 1:7141262/1‑101 (MQ=255) cGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCt < 1:4911894/101‑1 (MQ=255) cGTCAATCTCGTCGATGAAGATAATGCACGG‑GCTGTTTTCCTTGGCCTGATTAAACAAGTCACGGACACGAGAGGCACCGACACCGACGAACATTTCGACg > 1:4107251/1‑101 (MQ=255) gTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGa > 1:5653194/1‑101 (MQ=255) gTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGa < 1:4412515/101‑1 (MQ=255) gTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGa > 1:2756230/1‑101 (MQ=255) gTCAATCTCGTCGATGAAGATAATGCACGG‑GCTGTTTTCCTTGGCCTGATTAAACAAGTCACGGACACGAGAGGCACCGACACCGACGAACATTTCGACGa < 1:6833191/101‑1 (MQ=255) tcaatctcgtCGATGAAGATAATGCACGG‑GCTGTTTTCCTTGGCCTGATTAAACAAGTCACGGACACGAGAGGCACCGACACCGACGAACATTTCGACGaa < 1:8453802/92‑1 (MQ=255) tCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGaa > 1:3107486/1‑101 (MQ=255) cGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTACTACGAAg > 1:4678655/1‑101 (MQ=255) aatctcgtCGATGAAGATAATGCACGG‑GCTGTTTTCCTTGGCCTGATTAAACAAGTCACGGACACGAGAGGCACCGACACCGACGAACATTTCGACGAAGt > 1:7530728/8‑101 (MQ=255) atctcgtCGATGAAGATAATGCACGG‑GCTGTTTTCCTTGGCCTGATTAAACAAGTCACGGACACGAGAGGCACCGACACCGACGAACATTTCGACGAAGTc < 1:7260610/95‑1 (MQ=255) aTTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGCACACGGGATGCACCCACACCGACGAACATTTCTACGAGGTc > 1:3919495/1‑101 (MQ=255) aTTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTc > 1:12150432/1‑101 (MQ=255) aTTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTc < 1:9601912/101‑1 (MQ=255) tttCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCa < 1:14150035/101‑1 (MQ=255) ctcgtCGATGAAGATAATGCACGG‑GCTGTTTTCCTTGGCCTGATTAAACAAGTCACGGACACGAGAGGCACCGACACCGACGAACATTTCGACGAAGTccg > 1:6415888/5‑99 (MQ=255) tcgtCGATGAAGATAATGCACGG‑GCTGTTTTCCTTGGCCTGATTAAACAAGTCACGGACACGAGAGGCACCGACACCGACGAACATTTCGACGAAGTCCGa < 1:9777376/98‑1 (MQ=255) tcgtCGATGAAGATAATGCACGG‑GCTGTTTTCCTTGGCCTGATTAAACAAGTCACGGACACGAGAGGCACCGACACCGACGAACATTTCGACGAAGTCCGa < 1:10784059/98‑1 (MQ=255) tCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGa > 1:13204327/1‑101 (MQ=255) cgtCGATGAAGATAATGCACGG‑GCTGTTTTCCTTGGCCTGATTAAACAAGTCACGGACACGAGAGGCACCGACACCGACGAACATTTCGACGAAGTCCGaa > 1:13365062/3‑101 (MQ=255) cATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGaa < 1:1506136/101‑1 (MQ=255) cATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGaa < 1:13775832/101‑1 (MQ=255) aTCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCAACACCGACGAACATTTCTACGAAGTCAGAAc > 1:2507587/1‑101 (MQ=255) tCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAAcc < 1:12878597/101‑1 (MQ=255) cGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCg > 1:3540600/1‑101 (MQ=255) cGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCg < 1:13494102/101‑1 (MQ=255) gATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCgg < 1:7006659/101‑1 (MQ=255) gATAAAGATGATGCACGGTCGCGCTTT‑CTTCGCCTGTTCGAACACCTCACCAACACGGGATGCACCCACACCGAAGAACATTTCTACGAAGTCAGAACCgg < 1:10518501/101‑1 (MQ=255) aTAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGga > 1:10222009/1‑101 (MQ=255) aTAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGga > 1:2984162/1‑101 (MQ=255) tAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGgag > 1:4754170/1‑101 (MQ=255) tAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGgag > 1:1074744/1‑101 (MQ=255) aaaGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGgaga < 1:1218520/101‑1 (MQ=255) aaGATAATGCACGG‑GCTGTTTTCCTTGGCCTGATTAAACAAGTCACGGACACGAGAGGCACCGACACCGACGAACATTTCGACGAAGTCCGAACCCGAGAt < 1:6340959/101‑1 (MQ=255) tgatgCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTa > 1:3294840/1‑101 (MQ=255) tgatgCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTa < 1:7905063/101‑1 (MQ=255) gatgCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTaa > 1:6139853/1‑101 (MQ=255) atgCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTaaa > 1:5266399/1‑101 (MQ=255) tgCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAg < 1:3673942/101‑1 (MQ=255) tgCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAg < 1:2609605/101‑1 (MQ=255) cACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGaa < 1:951061/101‑1 (MQ=255) cACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGaa > 1:12329229/1‑101 (MQ=255) cACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGaa > 1:6861249/1‑101 (MQ=255) ggTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACgg > 1:6198572/1‑101 (MQ=255) ccGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACt > 1:5802945/1‑101 (MQ=255) ccGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACt > 1:7649355/1‑101 (MQ=255) cGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACtt < 1:6667799/101‑1 (MQ=255) gCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACttt > 1:11037458/1‑101 (MQ=255) gCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACttt > 1:11451821/1‑101 (MQ=255) cTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTttc < 1:12407921/101‑1 (MQ=255) cTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTttc < 1:2173597/101‑1 (MQ=255) cTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTttc > 1:9085323/1‑101 (MQ=255) cTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTttc < 1:1846293/101‑1 (MQ=255) | TTCAGAGTCTGTTCACGTTCATCGTGACCACCGCCCAGACCAGCGCCACGCTGGCGGCCTACGGCGTCGATTTCATCGATAAAGATGATGCACGGTGCCGCTTT‑CTTCGCCTGTTCGAACATGTCACGAACACGGGATGCACCCACACCGACGAACATTTCTACGAAGTCAGAACCGGAGATAGTAAAGAACGGAACTTTC > NC_007779/3325964‑3326164 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |