| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,441,958 | T→C | 7.4% | F459F (TTT→TTC) | thiC → | thiamin (pyrimidine moiety) biosynthesis protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,441,958 | 0 | T→C | 7.4% | 36.8 ‑1.6 ‑1.2 | 216 | F459F (TTT→TTC) | thiC | thiamin (pyrimidine moiety) biosynthesis protein |
| Reads supporting (aligned to +/- strand): new base (11/5): ref base (100/100): total (111/105) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.96e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.80e-02 | ||||||||||
Only 100 of 240 total aligned reads displayed.
ATGACGTGCAGGTGATGATTGAAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATG > NC_007779/3441858‑3442057 | tGACGTGCAGGTGATGATTGAAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGtttt < 1:684913/101‑1 (MQ=255) tGACGTGCAGGTGATGATTGAAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGtgtt > 1:12076651/1‑101 (MQ=255) gACGTGCAGGTGATGATTGAAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTa > 1:4748352/1‑101 (MQ=255) gCAGGTGATGATTGAAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACActc < 1:5593892/101‑1 (MQ=255) cAGGTGATGATTGAAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACActct < 1:1228332/101‑1 (MQ=255) cAGGTGATGATTGAAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACActct < 1:5396745/101‑1 (MQ=255) cAGGAGATGATTGAAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACActct > 1:13454402/1‑101 (MQ=255) aGGTGATGATTGAAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTg > 1:2500787/1‑101 (MQ=255) ggTGATGATTGAAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTgg < 1:3502335/101‑1 (MQ=255) tgatgaTTGAAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTgggg > 1:8052342/1‑101 (MQ=255) atgatTGAAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGcc < 1:6060159/101‑1 (MQ=255) atgatTGAAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGcc < 1:4427446/101‑1 (MQ=255) gatTGAAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGc < 1:7466529/101‑1 (MQ=255) gatTGAAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGc > 1:9698930/1‑101 (MQ=255) ttGAAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTa < 1:5808719/101‑1 (MQ=255) ttGAAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTa < 1:789169/101‑1 (MQ=255) ttGAAGGCCCAGGCCACGCGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTa < 1:5145822/101‑1 (MQ=255) gAAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAAc < 1:11690254/101‑1 (MQ=255) gAAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAAc > 1:125499/1‑101 (MQ=255) gAAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGCGCCGCTAAc > 1:4024708/1‑101 (MQ=255) aaGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACt > 1:5662039/1‑101 (MQ=255) aaGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACt > 1:8617564/1‑101 (MQ=255) aaGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACt < 1:12991379/101‑1 (MQ=255) aGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTa < 1:4134955/101‑1 (MQ=255) aGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTa < 1:7389096/101‑1 (MQ=255) gCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGGACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTAcc < 1:6314998/101‑1 (MQ=255) gCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTAcc > 1:11025308/1‑101 (MQ=255) ccAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGa > 1:10483692/1‑101 (MQ=255) cAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGat < 1:6049543/101‑1 (MQ=255) ggCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGatat > 1:5427219/1‑101 (MQ=255) gCCACGTGCCGATGCAGATGATCCTCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGATGCCGCTAACTACCGATAtt > 1:13374261/1‑101 (MQ=255) gCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATAtt < 1:4531881/101‑1 (MQ=255) gCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATAtt < 1:3732121/101‑1 (MQ=255) ccACGTGCCGATGCAGATTATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACCCTCTGGGGCCGCTAACTACCGATATTg < 1:4631763/101‑1 (MQ=255) ccACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTg < 1:6623668/101‑1 (MQ=255) ccACGTGCAGATGCAGATGATCCGCCGCAATATGCCCGAGGAGTTAGAGCACTGCCCCGAAGAGAAGTTTTACACTCTGGGGCCGCTAACTCCCGATATTg < 1:11841948/101‑1 (MQ=255) cACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTgc > 1:6419834/1‑101 (MQ=255) cACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTgc > 1:14155768/1‑101 (MQ=255) cGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTgcgc < 1:4790162/101‑1 (MQ=255) tGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCg > 1:12875906/1‑101 (MQ=255) gCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCgg < 1:7717827/101‑1 (MQ=255) gCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCgg < 1:9525999/101‑1 (MQ=255) ccGATGCAGATGATCCGCCGCAATATTACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCggg < 1:14034147/101‑1 (MQ=255) ccGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCggg > 1:6506728/1‑101 (MQ=255) cGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGc > 1:3809158/1‑101 (MQ=255) cGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGc > 1:8323223/1‑101 (MQ=255) gATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCt < 1:11592874/101‑1 (MQ=255) gtgctctaactCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTa > 1:11238656/11‑101 (MQ=255) gCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATg > 1:2403646/1‑101 (MQ=255) cAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGa > 1:10101967/1‑101 (MQ=255) aGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGAc > 1:8260288/1‑101 (MQ=255) aGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGAc < 1:4568068/101‑1 (MQ=255) atgatCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCa > 1:14085103/1‑101 (MQ=255) tgatCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCAc > 1:3088471/1‑101 (MQ=255) tgatCCGCCGCAATATGACAGAGGGGTTAGAGGACTGCCACCAAGCGCCGTTTTACACTCTGGGTCCGCTAACTACCGATATTGCGCCGGGCTATGACCAc > 1:8643167/1‑101 (MQ=255) tCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTc > 1:1073899/1‑101 (MQ=255) ccgccgCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCa > 1:11065348/1‑101 (MQ=255) cgccgcAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCAc < 1:1922702/101‑1 (MQ=255) ccgcAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGt < 1:13989340/101‑1 (MQ=255) cgcAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTc < 1:13257584/101‑1 (MQ=255) gcAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCg > 1:10371043/1‑101 (MQ=255) gcAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCg < 1:4997411/101‑1 (MQ=255) cAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCgg < 1:8969696/101‑1 (MQ=255) atGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGAt < 1:10154034/101‑1 (MQ=255) atGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGAt > 1:6243427/1‑101 (MQ=255) atGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGAt < 1:10931457/101‑1 (MQ=255) ccGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGt < 1:7744808/101‑1 (MQ=255) cGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTg > 1:1669206/1‑101 (MQ=255) cGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTg > 1:12163909/1‑101 (MQ=255) gaggagTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTgc > 1:7214720/1‑101 (MQ=255) aggagTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTgcg < 1:3234596/101‑1 (MQ=255) ttAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCgat > 1:5161237/1‑101 (MQ=255) tggtgtgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgc > 1:2684145/10‑100 (MQ=255) tggtgtgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgc > 1:8341683/10‑100 (MQ=255) cACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTgg > 1:10226117/1‑101 (MQ=255) cACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTgg > 1:1309990/1‑101 (MQ=255) aCTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGc > 1:11314013/1‑101 (MQ=255) tgtgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgca < 1:11374226/95‑5 (MQ=255) gtgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgcag > 1:573771/6‑96 (MQ=255) gtgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgcag > 1:7553057/6‑96 (MQ=255) tgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgcagg > 1:553835/5‑95 (MQ=255) ccACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGt > 1:1517994/1‑101 (MQ=255) cACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTgggt > 1:3904936/1‑99 (MQ=255) ggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgcaggctg > 1:7270025/2‑92 (MQ=255) gAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgcaggctgg > 1:13708744/1‑91 (MQ=255) gAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTgg < 1:7011556/101‑1 (MQ=255) aGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCt > 1:2984189/1‑101 (MQ=255) aGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCt < 1:4235961/101‑1 (MQ=255) gcgcCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTg < 1:1390208/101‑1 (MQ=255) cgcCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTTGCTgc > 1:12675133/1‑101 (MQ=255) cgcCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTgc > 1:10666196/1‑101 (MQ=255) cgcCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTgc < 1:7117127/101‑1 (MQ=255) gcCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTgcg < 1:3060790/101‑1 (MQ=255) ccGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCCCGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTgcgc < 1:11992107/101‑1 (MQ=255) cGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGcgcg < 1:8385815/101‑1 (MQ=255) cGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGcgcg > 1:9025261/1‑101 (MQ=255) cGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGcgcg > 1:5195194/1‑101 (MQ=255) cGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGcgcg > 1:5061392/1‑101 (MQ=255) ttttACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGAt < 1:9631677/101‑1 (MQ=255) ttttACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGGTTGGCTGCGCGAt > 1:1358037/1‑101 (MQ=255) | ATGACGTGCAGGTGATGATTGAAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATG > NC_007779/3441858‑3442057 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |