| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,441,979 | T→A | 6.9% | T466T (ACT→ACA) | thiC → | thiamin (pyrimidine moiety) biosynthesis protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,441,979 | 0 | T→A | 6.9% | 43.2 ‑1.6 ‑1.7 | 232 | T466T (ACT→ACA) | thiC | thiamin (pyrimidine moiety) biosynthesis protein |
| Reads supporting (aligned to +/- strand): new base (11/5): ref base (107/109): total (118/114) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.95e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.05e-02 | ||||||||||
Only 100 of 248 total aligned reads displayed.
AAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAG > NC_007779/3441879‑3442079 | aaGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACt > 1:8617564/1‑101 (MQ=255)aaGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACt < 1:12991379/101‑1 (MQ=255) aGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTa < 1:6863893/101‑1 (MQ=255) aGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTa < 1:4134955/101‑1 (MQ=255) aGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTa < 1:5908197/101‑1 (MQ=255) gCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGGACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTAcc < 1:6314998/101‑1 (MQ=255) cccAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCg > 1:9291228/1‑101 (MQ=255) cccAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCg > 1:14075218/1‑101 (MQ=255) ccAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGa > 1:12566330/1‑101 (MQ=255) aGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGata < 1:6051615/101‑1 (MQ=255) ggCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGatat < 1:11844424/101‑1 (MQ=255) gCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATAtt < 1:3732121/101‑1 (MQ=255) ccACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTg < 1:6623668/101‑1 (MQ=255) cACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTgc > 1:14155768/1‑101 (MQ=255) cGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTgcgc < 1:4790162/101‑1 (MQ=255) tGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCg > 1:12875906/1‑101 (MQ=255) tGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCg < 1:3065635/101‑1 (MQ=255) gCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCgg < 1:7717827/101‑1 (MQ=255) gCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCgg > 1:5663446/1‑101 (MQ=255) ccGATGCAGATGATCCGCCGCAATATTACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCggg < 1:14034147/101‑1 (MQ=255) cGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGc > 1:3809158/1‑101 (MQ=255) gATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCt > 1:11479314/1‑101 (MQ=255) gtgctctaactCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTa > 1:11238656/11‑101 (MQ=255) aTGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTa > 1:12396573/1‑101 (MQ=255) aTGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTa > 1:10559342/1‑101 (MQ=255) cacatgatCCGCCGCAATATGACCGAGGAGTTAGAGCGGTGCCACGCAGCGCCGTTTTACCCTCTGGGGCCAATAACTACCGCTATTGCGCAAGGCTATGa < 1:4539859/98‑1 (MQ=255) cAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGa > 1:10101967/1‑101 (MQ=255) aGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGAc > 1:8260288/1‑101 (MQ=255) aGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGAc > 1:7265260/1‑101 (MQ=255) tgatCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCAc > 1:3088471/1‑101 (MQ=255) tgatCCGCCGCAATATGACAGAGGGGTTAGAGGACTGCCACCAAGCGCCGTTTTACACTCTGGGTCCGCTAACTACCGATATTGCGCCGGGCTATGACCAc > 1:8643167/1‑101 (MQ=255) gatCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACt > 1:10854722/1‑101 (MQ=255) tCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTc > 1:1073899/1‑101 (MQ=255) tCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTc > 1:7672323/1‑101 (MQ=255) gccgcAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCAca < 1:13689386/101‑2 (MQ=255) gcAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCg > 1:10371043/1‑101 (MQ=255) gcAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCg < 1:4997411/101‑1 (MQ=255) cAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCgg < 1:8969696/101‑1 (MQ=255) tatGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGa < 1:3675569/101‑1 (MQ=255) atGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGAt < 1:10154034/101‑1 (MQ=255) tGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGAtt < 1:520305/101‑1 (MQ=255) gACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTg < 1:6429762/101‑1 (MQ=255) gACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTg < 1:1791722/101‑1 (MQ=255) aCCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTgg < 1:4503677/101‑1 (MQ=255) aCCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTgg < 1:7015230/101‑1 (MQ=255) ccGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGt > 1:2376257/1‑101 (MQ=255) ccGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGt < 1:7744808/101‑1 (MQ=255) cGAGGAGTTAGAGCACTGCCACGAAGCGCCTTTTTACACTCTGGGGCCGCTAACTGCCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTg < 1:13462738/101‑1 (MQ=255) cGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTg > 1:12163909/1‑101 (MQ=255) cGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTg < 1:5721983/101‑1 (MQ=255) agTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTgcggcg < 1:9530957/101‑1 (MQ=255) agTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTgcggcg > 1:2734374/1‑101 (MQ=255) gTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCga < 1:5078680/101‑1 (MQ=255) gTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCga > 1:467872/1‑101 (MQ=255) agagCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCgatga > 1:10972058/1‑101 (MQ=255) gagCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCgatgat < 1:4577631/101‑1 (MQ=255) gCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTg < 1:11645228/101‑1 (MQ=255) tggtgtgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgc > 1:8341683/10‑100 (MQ=255) aCTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGc > 1:11314013/1‑101 (MQ=255) tgtgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgca < 1:5492815/95‑5 (MQ=255) gtgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgcag > 1:573771/6‑96 (MQ=255) gtgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgcag > 1:7553057/6‑96 (MQ=255) gtgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgcag > 1:9639816/6‑96 (MQ=255) tgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgcagg > 1:5416480/5‑95 (MQ=255) tgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgcagg > 1:11026797/5‑95 (MQ=255) cACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTgggt > 1:3904936/1‑99 (MQ=255) cACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGtt > 1:890446/1‑101 (MQ=255) cACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGtt < 1:728518/101‑1 (MQ=255) aggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgcaggct < 1:13246865/99‑9 (MQ=255) aGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCt < 1:4235961/101‑1 (MQ=255) aGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCt > 1:2984189/1‑101 (MQ=255) gcgcCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTg < 1:1390208/101‑1 (MQ=255) gcCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTgcg > 1:7434329/1‑101 (MQ=255) cGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGcgcg > 1:9025261/1‑101 (MQ=255) cGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGcgcg > 1:6261907/1‑101 (MQ=255) cGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGcgcg < 1:8385815/101‑1 (MQ=255) cGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGcgcg > 1:8278608/1‑101 (MQ=255) ttttACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGAt < 1:5173937/101‑1 (MQ=255) ttttACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGAt > 1:12098486/1‑101 (MQ=255) ttttACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGAt > 1:2420846/1‑101 (MQ=255) tttACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATg > 1:1499119/1‑101 (MQ=255) tACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATGct < 1:79210/101‑1 (MQ=255) acacTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATGctc < 1:10032789/101‑1 (MQ=255) cacTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATGctct > 1:1325540/1‑101 (MQ=255) cacTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATGctct < 1:6487726/101‑1 (MQ=255) ctctGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATGCTCTGt > 1:137413/1‑101 (MQ=255) tctGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATGCTCTGtt > 1:4850938/1‑101 (MQ=255) tctGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATGCTCTGtt < 1:3270501/101‑1 (MQ=255) ctGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATGCTCTGTTa < 1:13399857/101‑1 (MQ=255) ggggCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATGCTCTGTTACg > 1:13308615/1‑101 (MQ=255) ggggCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATGCTCTGTTACg < 1:13936531/101‑1 (MQ=255) gCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATGCTCTGTTACGTaa < 1:7123666/101‑1 (MQ=255) gCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATGCTCTGTTACGTaa > 1:11800486/1‑101 (MQ=255) cTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGcc < 1:163534/101‑1 (MQ=255) tAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTTGCTGCGCGATGCTCTGTTACGTAACGCCa > 1:5147623/1‑101 (MQ=255) aaCTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCaa < 1:6938045/101‑1 (MQ=255) aaCTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCaa < 1:3415353/101‑1 (MQ=255) aaCTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCaa > 1:10644174/1‑101 (MQ=255) cTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCaaaa < 1:5621111/101‑1 (MQ=255) tACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAag > 1:10324378/1‑101 (MQ=255) | AAGGCCCAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTGGCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAG > NC_007779/3441879‑3442079 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |