| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,441,985 | T→C | 9.5% | D468D (GAT→GAC) | thiC → | thiamin (pyrimidine moiety) biosynthesis protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,441,985 | 0 | T→C | 9.5% | 52.8 ‑3.1 ‑1.0 | 231 | D468D (GAT→GAC) | thiC | thiamin (pyrimidine moiety) biosynthesis protein |
| Reads supporting (aligned to +/- strand): new base (16/6): ref base (104/105): total (120/111) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.53e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.12e-01 | ||||||||||
Only 100 of 249 total aligned reads displayed.
CAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATC > NC_007779/3441885‑3442085 | cAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGat > 1:1432371/1‑101 (MQ=255) aGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGata < 1:5787815/101‑1 (MQ=255) ggCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGatat > 1:5427219/1‑101 (MQ=255) gCCACGTGCCGATGCAGATGATCCTCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGATGCCGCTAACTACCGATAtt > 1:13374261/1‑101 (MQ=255) gCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATAtt < 1:4531881/101‑1 (MQ=255) gCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAATTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATAtt < 1:3204386/101‑1 (MQ=255) ccACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTg < 1:6623668/101‑1 (MQ=255) cACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTgc > 1:13915940/1‑101 (MQ=255) cGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTgcgc < 1:4790162/101‑1 (MQ=255) tGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCg < 1:3065635/101‑1 (MQ=255) tGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCg > 1:12875906/1‑101 (MQ=255) gCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCgg > 1:5663446/1‑101 (MQ=255) cGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGc > 1:3809158/1‑101 (MQ=255) cGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGc < 1:12338647/101‑1 (MQ=255) gATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCt > 1:11210080/1‑101 (MQ=255) tGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTAt < 1:3430448/101‑1 (MQ=255) gCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATg > 1:2403646/1‑101 (MQ=255) cAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGa > 1:10101967/1‑101 (MQ=255) aGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGAc < 1:4568068/101‑1 (MQ=255) aGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGAc > 1:7467821/1‑101 (MQ=255) aGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGAc > 1:7265260/1‑101 (MQ=255) tCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTc > 1:7672323/1‑101 (MQ=255) ccgcAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGt < 1:13989340/101‑1 (MQ=255) gcAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCg > 1:10371043/1‑101 (MQ=255) gcAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCg < 1:4997411/101‑1 (MQ=255) cAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCgg < 1:8969696/101‑1 (MQ=255) aaTATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCggg < 1:4843432/101‑1 (MQ=255) tatGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGa < 1:3675569/101‑1 (MQ=255) atGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGAt > 1:6243427/1‑101 (MQ=255) atGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGAt < 1:10154034/101‑1 (MQ=255) atGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGAt < 1:10931457/101‑1 (MQ=255) tGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGAtt < 1:520305/101‑1 (MQ=255) tGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGAtt < 1:13289212/101‑1 (MQ=255) gACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTg < 1:6429762/101‑1 (MQ=255) gACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTg < 1:1791722/101‑1 (MQ=255) ccGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGt < 1:7744808/101‑1 (MQ=255) cGAGGAGTTAGAGCACTGCCACGAAGCGCCTTTTTACACTCTGGGGCCGCTAACTGCCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTg < 1:13462738/101‑1 (MQ=255) cGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTg > 1:14095601/1‑101 (MQ=255) gaggagTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTgc > 1:7214720/1‑101 (MQ=255) gTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCga > 1:467872/1‑101 (MQ=255) ttAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCgat > 1:5161237/1‑101 (MQ=255) tAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGCTTGGGGCGGCgatg > 1:12218049/1‑101 (MQ=255) tAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCgatg < 1:13805272/101‑1 (MQ=255) agagCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCgatga > 1:13253561/1‑101 (MQ=255) gCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTg > 1:1407081/1‑101 (MQ=255) gCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTg < 1:11645228/101‑1 (MQ=255) tggtgtgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgc > 1:2684145/10‑100 (MQ=255) cACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTg‑g > 1:1309990/1‑101 (MQ=255) ggtgtgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcg < 1:3019799/93‑3 (MQ=255) aCTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑Gc > 1:11314013/1‑101 (MQ=255) cTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCt < 1:634202/101‑1 (MQ=255) tgtgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgca < 1:11374226/95‑5 (MQ=255) gtgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgcag > 1:573771/6‑96 (MQ=255) tgaggAAGCTCCGTTCTACACCCTCGGCCCTCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcccagg < 1:8332312/97‑7 (MQ=255) tgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgcagg > 1:553835/5‑95 (MQ=255) tgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgcagg > 1:11026797/5‑95 (MQ=255) gcACGAAGAGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACAAATTCACGTCGGGGATTGGTGCGGCGGTGTATG‑GATGGt > 1:4012016/2‑101 (MQ=255) ccACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGt > 1:1517994/1‑101 (MQ=255) cACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGtt > 1:890446/1‑101 (MQ=255) gAAGCTCCGTTCTACGCCCTCGGCCCGCTGGCAGCCGTCATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgcaggctgg < 1:8505637/101‑11 (MQ=255) gAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgcaggctgg > 1:13708744/1‑91 (MQ=255) gAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTgg < 1:7011556/101‑1 (MQ=255) aaGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGc > 1:417474/1‑101 (MQ=255) gcgcCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGTGATGATTG‑GCTGGTTTGGCTg < 1:7649784/101‑1 (MQ=255) cgcCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTTGCTgc > 1:12675133/1‑101 (MQ=255) cgcCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTgc > 1:10666196/1‑101 (MQ=255) cgcCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTgc < 1:7117127/101‑1 (MQ=255) ccGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCCCGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTgcgc < 1:11992107/101‑1 (MQ=255) cGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGcgcg > 1:5061392/1‑101 (MQ=255) cGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGcgcg > 1:8278608/1‑101 (MQ=255) cGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGcgcg < 1:8385815/101‑1 (MQ=255) ttttACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGAt > 1:12098486/1‑101 (MQ=255) ttttACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGAt < 1:9631677/101‑1 (MQ=255) ttttACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGGTTGGCTGCGCGAt > 1:1358037/1‑101 (MQ=255) tACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGct < 1:232252/101‑1 (MQ=255) acacTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGctc < 1:10032789/101‑1 (MQ=255) cacTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGGTGCGCGATGctct > 1:3744810/1‑101 (MQ=255) cacTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGctct < 1:6487726/101‑1 (MQ=255) tctGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGtt < 1:3270501/101‑1 (MQ=255) tctGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGtt > 1:7925803/1‑101 (MQ=255) ggggCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACg < 1:7721419/101‑1 (MQ=255) ggCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTa > 1:5694349/1‑101 (MQ=255) ggCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTa < 1:10572756/101‑1 (MQ=255) gCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTaa > 1:11800486/1‑101 (MQ=255) cGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACg < 1:9736532/101‑1 (MQ=255) cTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGcc < 1:163534/101‑1 (MQ=255) tAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTTGCTGCGCGATGCTCTGTTACGTAACGCCa > 1:5147623/1‑101 (MQ=255) aaCTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCaa > 1:6901026/1‑101 (MQ=255) aaCTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCCGCGCGATGCTCTGTTACGTAACGCCaa > 1:4261282/1‑101 (MQ=255) aCTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCaaa > 1:864555/1‑101 (MQ=255) cTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCaaaa < 1:9434003/101‑1 (MQ=255) tACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAag < 1:2806844/101‑1 (MQ=255) tACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAag < 1:10803723/101‑1 (MQ=255) tACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAag < 1:7395214/101‑1 (MQ=255) tACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAag > 1:10324378/1‑101 (MQ=255) aaCCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTGCGCAGG‑CTGGTACCGCCATGCTCTGCTACGTCACGCCgaagg > 1:4615764/2‑99 (MQ=255) ccGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAagag > 1:5298895/1‑101 (MQ=255) cGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGc > 1:9184795/1‑101 (MQ=255) cGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTGCGCAGG‑CTGGTACCGCCATGCTCTTCTACGTCACGCCGAAGGAGc < 1:9009414/101‑1 (MQ=255) tatTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATc > 1:8082767/1‑101 (MQ=255) | CAGGCCACGTGCCGATGCAGATGATCCGCCGCAATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATC > NC_007779/3441885‑3442085 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |