| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,442,017 | G→C | 12.4% | G479A (GGG→GCG) | thiC → | thiamin (pyrimidine moiety) biosynthesis protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,442,017 | 0 | G→C | 12.4% | 87.4 ‑3.0 ‑0.1 | 241 | G479A (GGG→GCG) | thiC | thiamin (pyrimidine moiety) biosynthesis protein |
| Reads supporting (aligned to +/- strand): new base (20/10): ref base (97/114): total (117/124) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.96e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.59e-01 | ||||||||||
Only 100 of 256 total aligned reads displayed.
AATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAG > NC_007779/3441917‑3442117 | atGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGAt < 1:10931457/101‑1 (MQ=255) atGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGAt > 1:6243427/1‑101 (MQ=255) tGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGAtt < 1:520305/101‑1 (MQ=255) gACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTg < 1:6429762/101‑1 (MQ=255) aCCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTgg < 1:4503677/101‑1 (MQ=255) ccGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGt > 1:2376257/1‑101 (MQ=255) cGAGGAGTTAGAGCACTGCCACGAAGCGCCTTTTTACACTCTGGGGCCGCTAACTGCCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTg < 1:13462738/101‑1 (MQ=255) cGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTg > 1:1669206/1‑101 (MQ=255) cGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTg < 1:5101800/101‑1 (MQ=255) cGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTg > 1:14095601/1‑101 (MQ=255) cGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTg > 1:10130077/1‑101 (MQ=255) gTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCga > 1:467872/1‑101 (MQ=255) tAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCgatg < 1:13805272/101‑1 (MQ=255) agagCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCgatga > 1:11993120/1‑101 (MQ=255) agagCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCgatga > 1:13253561/1‑101 (MQ=255) tggtgtgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgc > 1:8341683/10‑100 (MQ=255) cACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTg‑g > 1:10226117/1‑101 (MQ=255) cACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTg‑g > 1:1309990/1‑101 (MQ=255) tgtgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgca < 1:5492815/95‑5 (MQ=255) tgtgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgca < 1:11374226/95‑5 (MQ=255) tgtgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgca > 1:11756615/7‑97 (MQ=255) gtgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgcag > 1:573771/6‑96 (MQ=255) tgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgcagg > 1:11026797/5‑95 (MQ=255) gcACGAAGAGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACAAATTCACGTCGGGGATTGGTGCGGCGGTGTATG‑GATGGt > 1:4012016/2‑101 (MQ=255) ccACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGt > 1:1517994/1‑101 (MQ=255) ggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgcaggctg > 1:7270025/2‑92 (MQ=255) cGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTg > 1:8909127/1‑101 (MQ=255) gAAGCTCCGTTCTACGCCCTCGGCCCGCTGGCAGCCGTCATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgcaggctgg < 1:8505637/101‑11 (MQ=255) gAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTgg < 1:7011556/101‑1 (MQ=255) aGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCt < 1:4235961/101‑1 (MQ=255) aGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCt > 1:2984189/1‑101 (MQ=255) gcgcCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGTGATGATTG‑GCTGGTTTGGCTg < 1:7649784/101‑1 (MQ=255) cgcCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTgc > 1:6749588/1‑101 (MQ=255) cgcCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTgc < 1:7117127/101‑1 (MQ=255) ccGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTgcgc < 1:2604202/101‑1 (MQ=255) cGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGcgcg > 1:8278608/1‑101 (MQ=255) cGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGcgcg > 1:9025261/1‑101 (MQ=255) cGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGcgcg < 1:10712738/101‑1 (MQ=255) gTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGGTTGGCTGCGCGa > 1:505797/1‑101 (MQ=255) ttttACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGAt < 1:9631677/101‑1 (MQ=255) ttttACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGAt < 1:5173937/101‑1 (MQ=255) tttACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATg < 1:4583599/101‑1 (MQ=255) tACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGct < 1:79210/101‑1 (MQ=255) acacTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGctc < 1:10032789/101‑1 (MQ=255) cacTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGGTGCGCGATGctct > 1:3744810/1‑101 (MQ=255) acTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTg < 1:10364610/101‑1 (MQ=255) ctctGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGt < 1:5581123/101‑1 (MQ=255) atctGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGt < 1:3686834/100‑1 (MQ=255) tctGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGtt < 1:3270501/101‑1 (MQ=255) ctGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTa < 1:13399857/101‑1 (MQ=255) ggggCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACg < 1:7721419/101‑1 (MQ=255) ggggCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACg > 1:13308615/1‑101 (MQ=255) ggCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTa < 1:1239999/101‑1 (MQ=255) ggCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTa > 1:5694349/1‑101 (MQ=255) ggCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTa < 1:10572756/101‑1 (MQ=255) ccGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAAc > 1:8986606/1‑101 (MQ=255) cGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACg < 1:9736532/101‑1 (MQ=255) cTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGcc < 1:760251/101‑1 (MQ=255) aaCTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCaa < 1:3415353/101‑1 (MQ=255) cTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCaaaa < 1:4804565/101‑1 (MQ=255) cTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCaaaa < 1:5378619/101‑1 (MQ=255) cTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGAGTG‑GCTGGTTTGGGTGCGCGATGCTCTGTTACGTAACGCCaaaa < 1:13033198/101‑1 (MQ=255) tACCGATATTGCGCCGGGCTATGTCCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAag < 1:8721583/101‑1 (MQ=255) tACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAag < 1:7199490/101‑1 (MQ=255) tACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAag < 1:7395214/101‑1 (MQ=255) tACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAag < 1:2806844/101‑1 (MQ=255) ccGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAagag > 1:5298895/1‑101 (MQ=255) cGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGc > 1:9184795/1‑101 (MQ=255) gacatcgcgcCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTGCGCAGG‑CTGGTACCGCCATGCTCTGCTACGTCACGCCGAAGGAGCa > 1:12888273/7‑101 (MQ=255) tatTTCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTTCGGCGATGATTG‑GCTGGTTTTGCTGCGCAATGGCCCGCTACGCAATGCCAAAAGAGCaac > 1:13649561/1‑99 (MQ=255) tatTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATc > 1:8082767/1‑101 (MQ=255) agcgcgcCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTGCGCAGG‑CTGGTACCGCCATGCTCTGCTACGTCACGCCGAAGGAGCACCt < 1:2866559/98‑1 (MQ=255) tGCGCCGGGCTATGACCACTTCACGTCGGCGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTgg > 1:8142239/1‑101 (MQ=255) cgcgcCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTGCGCAGG‑CTGGTACCGCCATGCTCTGCTACGTCACGCCGAAGGAGCACCTgg > 1:5645003/2‑101 (MQ=255) gcCGGGCTATGACCACTTCACGTCGGGGATTGGAGCGGCGTTGTTTG‑GCTGGTTTGGCTGCGCGACGCTCTGTTTCGTAACGCCAAAAGAGCATCTgggcc > 1:1385426/1‑99 (MQ=255) cGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGGTGCTCTGTTACGCAACGACAAAAGAGCATCTgggagtg > 1:9298916/1‑97 (MQ=255) cGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTg > 1:11791363/1‑101 (MQ=255) gggCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGc < 1:5817937/101‑1 (MQ=255) gCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGccc > 1:12103995/1‑101 (MQ=255) cTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCa < 1:13576131/101‑1 (MQ=255) tATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCaa > 1:12167644/1‑101 (MQ=255) tGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATa < 1:1049386/101‑1 (MQ=255) tGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCCCGATGCCCTGTTACGTAACGCCAAAAAAGAAACGGGGTCTGCCCAATa > 1:6347068/1‑101 (MQ=255) gACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGGTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATaa > 1:2204692/1‑101 (MQ=255) ccACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAaag < 1:13273840/101‑1 (MQ=255) cACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAaaga > 1:7730998/1‑101 (MQ=255) cACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAaaga > 1:11290704/1‑101 (MQ=255) cACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAaaga > 1:8627172/1‑101 (MQ=255) ttCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGTCCAATAAagaaga < 1:1947835/101‑1 (MQ=255) cACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGGTTGGCTGCGGGAGGCTCTGTTACGGAAAGCCAAAAGAGCATCCGGGTCTGCCCAATGAAGAAGATg > 1:319961/1‑101 (MQ=255) aCGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGt < 1:4174154/101‑1 (MQ=255) aCGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGt < 1:13998729/101‑1 (MQ=255) gTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTa < 1:6704658/101‑1 (MQ=255) gTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTa < 1:352040/101‑1 (MQ=255) tCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTaa > 1:12202770/1‑101 (MQ=255) tCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTaa < 1:4894091/101‑1 (MQ=255) cGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGTCCAATAAAGAAGATGTTAAg < 1:1785350/101‑1 (MQ=255) ggggATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGc < 1:9592434/101‑1 (MQ=255) gggATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCa > 1:12786883/1‑101 (MQ=255) ggATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAg < 1:8534782/101‑1 (MQ=255) | AATATGACCGAGGAGTTAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAG > NC_007779/3441917‑3442117 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |