| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,442,033 | G→C | 12.1% | M484I (ATG→ATC) | thiC → | thiamin (pyrimidine moiety) biosynthesis protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,442,033 | 0 | G→C | 12.1% | 84.4 ‑3.1 ‑0.0 | 240 | M484I (ATG→ATC) | thiC | thiamin (pyrimidine moiety) biosynthesis protein |
| Reads supporting (aligned to +/- strand): new base (19/10): ref base (93/118): total (112/128) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.57e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.84e-01 | ||||||||||
Only 100 of 267 total aligned reads displayed.
TAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATA > NC_007779/3441933‑3442133 | tAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCgatg < 1:13805272/101‑1 (MQ=255) agagCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCgatga > 1:13253561/1‑101 (MQ=255) agagCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCgatga > 1:11993120/1‑101 (MQ=255) gagCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCgatgat < 1:4577631/101‑1 (MQ=255) agCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGAtt < 1:5230561/101‑1 (MQ=255) gCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTg < 1:11645228/101‑1 (MQ=255) cACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTg‑g > 1:1309990/1‑101 (MQ=255) ggtgtgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcg < 1:3019799/93‑3 (MQ=255) aCTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑Gc > 1:11314013/1‑101 (MQ=255) gtgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgcag > 1:9639816/6‑96 (MQ=255) tgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgcagg > 1:11026797/5‑95 (MQ=255) tgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgcagg > 1:5416480/5‑95 (MQ=255) tgaggAAGCTCCGTTCTACACCCTCGGCCCGCTGGCAACCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTgcgcagg > 1:553835/5‑95 (MQ=255) gcACGAAGAGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACAAATTCACGTCGGGGATTGGTGCGGCGGTGTATG‑GATGGt > 1:4012016/2‑101 (MQ=255) ccACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGt > 1:1517994/1‑101 (MQ=255) cACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGtt > 1:3876346/1‑101 (MQ=255) cACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGtt < 1:728518/101‑1 (MQ=255) gAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTgg < 1:7011556/101‑1 (MQ=255) gcgcCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTg < 1:1390208/101‑1 (MQ=255) gcgcCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTg < 1:12116639/101‑1 (MQ=255) cgcCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTTGCTgc > 1:12675133/1‑101 (MQ=255) cgcCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTgc > 1:6749588/1‑101 (MQ=255) gcCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTgcg > 1:7434329/1‑101 (MQ=255) ccGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTgcgc < 1:2604202/101‑1 (MQ=255) cGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGcgcg > 1:13541172/1‑101 (MQ=255) cGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGcgcg > 1:6261907/1‑101 (MQ=255) gTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGGTTGGCTGCGCGa > 1:505797/1‑101 (MQ=255) ttttACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGAt < 1:8412876/101‑1 (MQ=255) ttttACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGAt < 1:5173937/101‑1 (MQ=255) ttttACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGGTTGGCTGCGCGAt > 1:1358037/1‑101 (MQ=255) cacTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGctct < 1:6487726/101‑1 (MQ=255) atctGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGt < 1:3686834/100‑1 (MQ=255) tctGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGtt > 1:4850938/1‑101 (MQ=255) ggggCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACg < 1:7721419/101‑1 (MQ=255) ggggCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACg > 1:9255151/1‑101 (MQ=255) agggCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACg > 1:10058201/2‑101 (MQ=255) ggCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTa < 1:1239999/101‑1 (MQ=255) cGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACg < 1:9736532/101‑1 (MQ=255) gctggcaaCCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTGCGCAGG‑CTGGTACCGCCATGCTCTGCTACGTCACGc > 1:1813556/8‑101 (MQ=255) gCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGc < 1:573080/101‑1 (MQ=255) tAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTTGCTGCGCGATGCTCTGTTACGTAACGCCa > 1:5147623/1‑101 (MQ=255) aaCTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCaa > 1:10644174/1‑101 (MQ=255) aCTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCaaa > 1:864555/1‑101 (MQ=255) cTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCaaaa < 1:5621111/101‑1 (MQ=255) cTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGAGTG‑GCTGGTTTGGGTGCGCGATGCTCTGTTACGTAACGCCaaaa < 1:13033198/101‑1 (MQ=255) tACCGATATTGCGCCGGGCTATGTCCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAag < 1:8721583/101‑1 (MQ=255) tACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAag < 1:7199490/101‑1 (MQ=255) tACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAag < 1:10803723/101‑1 (MQ=255) tACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAag > 1:10324378/1‑101 (MQ=255) aaCCGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTGCGCAGG‑CTGGTACCGCCATGCTCTGCTACGTCACGCCgaagg > 1:4615764/2‑99 (MQ=255) ccGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAagag > 1:635558/1‑101 (MQ=255) cGACATCGCGCCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTGCGCAGG‑CTGGTACCGCCATGCTCTTCTACGTCACGCCGAAGGAGc < 1:9009414/101‑1 (MQ=255) gacatcgcgcCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTGCGCAGG‑CTGGTACCGCCATGCTCTGCTACGTCACGCCGAAGGAGCa > 1:12888273/7‑101 (MQ=255) tatTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATc > 1:2825191/1‑101 (MQ=255) atTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCt < 1:8130984/101‑1 (MQ=255) atTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCt < 1:10447992/101‑1 (MQ=255) tGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTgg < 1:11759610/101‑1 (MQ=255) cgcgcCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTGCGCAGG‑CTGGTACCGCCATGCTCTGCTACGTCACGCCGAAGGAGCACCTgg > 1:13294079/2‑101 (MQ=255) cgcgcCGGGCTATGACCACATCACGTCGGCTATCGGCGCGGCAATCATTGCGCAGG‑CTGGTACCGCCATGCTCTGCTACGTCACGCCGAAGGAGCACCTgg > 1:5645003/2‑101 (MQ=255) cGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTg > 1:8530109/1‑101 (MQ=255) gggCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGc < 1:2231772/101‑1 (MQ=255) tATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCaa > 1:12167644/1‑101 (MQ=255) aTGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTTGGTCTGCCCAAt > 1:4246650/1‑101 (MQ=255) tGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATa < 1:960211/101‑1 (MQ=255) tGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATa < 1:1049386/101‑1 (MQ=255) gACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATaa > 1:2968522/1‑101 (MQ=255) aCCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATaaa < 1:8186025/101‑1 (MQ=255) cACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGGGATGCTCTGTTACGGAACGCCAAAAGAGCATAGGGGGTTGGCCCATAaaga > 1:3439701/1‑101 (MQ=255) cACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAaaga < 1:13332643/101‑1 (MQ=255) cACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAaaga < 1:53333/101‑1 (MQ=255) ttCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGTCCAATAAagaaga < 1:1947835/101‑1 (MQ=255) ttCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAagaaga < 1:8591628/101‑1 (MQ=255) cACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATg > 1:3347185/1‑101 (MQ=255) cACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGGTTGGCTGCGGGAGGCTCTGTTACGGAAAGCCAAAAGAGCATCCGGGTCTGCCCAATGAAGAAGATg > 1:319961/1‑101 (MQ=255) aCGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGt > 1:7637627/1‑101 (MQ=255) aCGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGt < 1:4174154/101‑1 (MQ=255) aCGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGt < 1:13998729/101‑1 (MQ=255) tCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTaa > 1:12202770/1‑101 (MQ=255) tCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTaa < 1:5795671/101‑1 (MQ=255) cGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAg > 1:802055/1‑101 (MQ=255) cGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAg < 1:8931611/101‑1 (MQ=255) gggCTTGGTGCGCCGATAATTG‑GCTGGTTTGGCTGCGCGAAGCGCTGTTGCGTAACGCCAAAAGAGGAACTGGGTCTGACCAATAAAGAAGATGTTAAGCa > 1:9032303/1‑101 (MQ=255) gggATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCa > 1:12786883/1‑101 (MQ=255) gATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTGCGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAgg < 1:4920775/101‑1 (MQ=255) aTTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAggg < 1:13659244/101‑1 (MQ=255) ttGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAgggg < 1:10026019/101‑1 (MQ=255) ttGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAgggg < 1:7663755/101‑1 (MQ=255) tGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGc > 1:1585312/1‑101 (MQ=255) ggTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCt > 1:1719339/1‑101 (MQ=255) gTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCtt > 1:9449489/1‑101 (MQ=255) tGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTa < 1:11839611/101‑1 (MQ=255) gcggcgATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTAt > 1:14254548/1‑101 (MQ=255) gcggcgATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTAt < 1:2537517/101‑1 (MQ=255) gcggcgATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTAt < 1:5876096/101‑1 (MQ=255) ggcgATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCa > 1:10929483/1‑101 (MQ=255) gatgatTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCt < 1:8877445/101‑1 (MQ=255) atgatTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCta < 1:7109720/101‑1 (MQ=255) tgatTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCtat < 1:7838363/101‑1 (MQ=255) gatTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCtata < 1:8359349/101‑1 (MQ=255) gatTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCtata > 1:8335704/1‑101 (MQ=255) | TAGAGCACTGCCACGAAGCGCCGTTTTACACTCTGGGGCCGCTAACTACCGATATTGCGCCGGGCTATGACCACTTCACGTCGGGGATTGGTGCGGCGATGATTG‑GCTGGTTTGGCTGCGCGATGCTCTGTTACGTAACGCCAAAAGAGCATCTGGGTCTGCCCAATAAAGAAGATGTTAAGCAGGGGCTTATCACCTATA > NC_007779/3441933‑3442133 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |