| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,450,273 | A→C | 12.3% | S353S (TCT→TCG) | rpoC ← | RNA polymerase, beta prime subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,450,273 | 0 | A→C | 12.3% | 115.2 ‑1.3 ‑0.2 | 269 | S353S (TCT→TCG) | rpoC | RNA polymerase, beta prime subunit |
| Reads supporting (aligned to +/- strand): new base (19/14): ref base (111/125): total (130/139) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.71e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.90e-01 | ||||||||||
Only 100 of 276 total aligned reads displayed.
GTTCCAGCTTGCCGTAGATGAACGGTTTGAACAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTCGGCCAAAGATTTCAGAGGACGCTTGT > NC_007779/3450173‑3450373 | gTTCCAGCTTGCCGTAGATGAACGGTTTGAACAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCNNNNNNNNNNCTACGGTGATTACa > 1:7213120/1‑101 (MQ=255) tCCAGCTTGCCGTAGATGAACGGTTTGAACAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGa < 1:7619647/101‑1 (MQ=255) tCCAGCTTGCCGTAGATGAACGGTTTGAACAGCTCCAGGGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGa > 1:5745781/1‑101 (MQ=255) cAGCTTGCCGTAGATGAACGGTTTGAACAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAAc < 1:13531624/101‑1 (MQ=255) cAGCTTGCCGTAGATGAACGGTTTGAACAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAAc < 1:11887121/101‑1 (MQ=255) tGCCGTAGATGAACGGTTTGAACAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCg > 1:7571853/1‑101 (MQ=255) gCCGTAGATGAACGGTTTGAACAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCgg < 1:6658288/101‑1 (MQ=255) ccGTAGATGAACGGTTTGAACAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGa > 1:466026/1‑101 (MQ=255) cGTAGATGAACGGTTTGAACAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGag > 1:11352123/1‑101 (MQ=255) gTAGATGAACGGTTTGAACAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGagt > 1:10328412/1‑101 (MQ=255) tAGATGAACGGTTTGAACAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGagta < 1:6416011/101‑1 (MQ=255) tAGATGAACGGTTTGAACAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGagta > 1:2037861/1‑101 (MQ=255) aGATGAACGGTTTGAACAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGagtag > 1:7676715/1‑101 (MQ=255) gAACGGTTTGAACAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCaa < 1:2182434/101‑1 (MQ=255) aCGGTTTGAACAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAaca < 1:10020519/101‑1 (MQ=255) aCGGCTTGAACAGCTCAAGAGCCATCAGCTTCGGCAGACCACACTGGTGCAGCTTCAGCTGCGGGCCGACGATAATAACCGAACGGCCGGAGTAGTCAaca < 1:5767049/101‑1 (MQ=255) cGGTTTGAACAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAacac < 1:1622917/101‑1 (MQ=255) cGGTTTGAACAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAacac > 1:10463194/1‑101 (MQ=255) cGGCTTGAACAGCTCAAGAGCCATCAGCTTCGGCAGACCACACTGGTGCAGCTTCAGCTGCGGGCCGACGATAATAACCGAACGGCCGGAGTAGTCAacac < 1:13986755/101‑1 (MQ=255) gcttGAACAGCTCAAGAGCCATCAGCTTCGGCAGACCACACTGGTGCAGCTTCAGCTGCGGGCCGACGATAATAACCGAACGGCCGGAGTAGTCAACACGc < 1:12823889/99‑1 (MQ=255) tttGAACAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCt > 1:3721216/1‑101 (MQ=255) cttGAACAGCTCAAGAGCCATCAGCTTCGGCAGACCACACTGGTGCAGCTTCAGCTGCGGGCCGACGATAATAACCGAACGGCCGGAGTAGTCAACACGCt > 1:4035331/2‑101 (MQ=255) ttGAACAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCtt > 1:8628362/1‑101 (MQ=255) gAACAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTAc < 1:12401754/101‑1 (MQ=255) gAACAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTAc > 1:2117745/1‑101 (MQ=255) aaCAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTAcc > 1:13293946/1‑101 (MQ=255) aaCAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTAcc > 1:11610238/1‑101 (MQ=255) aaCAGCTCAAGAGCCATCAGCTTCGGCAGACCACACTGGTGCAGCTTCAGCTGCGGGCCGACGATAATAACCGAACGGCCGGAGTAGTCAACACGCTTAcc > 1:4869324/1‑101 (MQ=255) cAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGa < 1:4985541/101‑1 (MQ=255) cAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGa < 1:6896738/101‑1 (MQ=255) gCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGc < 1:12231343/101‑1 (MQ=255) gCTCAAGAGCCATCAGCTTCGGCAGACCACACTGGTGCAGCTTCAGCTGCGGGCCGACGATAATAACCGAACGGCCGGAGTAGTCAACACGCTTACCCAGc < 1:6974773/101‑1 (MQ=255) cTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCa > 1:1436153/1‑101 (MQ=255) ccAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAgg > 1:10634661/1‑101 (MQ=255) ccAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAgg < 1:3068092/101‑1 (MQ=255) cAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGt > 1:11559957/1‑101 (MQ=255) aGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGtt < 1:2554028/101‑1 (MQ=255) aGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGtt < 1:13616701/101‑1 (MQ=255) aGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGtt < 1:5205736/101‑1 (MQ=255) gTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTc < 1:7656237/101‑1 (MQ=255) tGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCt < 1:2738577/101‑1 (MQ=255) agccatcagcttcGGCAGACCACACTGGTGCAGCTTCATCTGCGGGCCGACGATAATAACCGAACGGCCGGAGTAGTCAACACGCTTACCCAGCAGGTTCt < 1:5339249/92‑1 (MQ=255) ccatcagcttcGGCAGACCACACTGGTGCAGCTTCAGCTGCGGGCCGACGATAATAACCGAACGGCCGGAGTAGTCAACACGCTTACCCAGCAGGTTCTGa < 1:5970204/94‑1 (MQ=255) cATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGAc > 1:4928594/1‑101 (MQ=255) atcagcttcGGCAGACCACACTGGTGCAGCTTCAGCTGCGGGCCGACGATAATAACCGAACGGCCGGAGTAGTCAACACGCTTACCCAGCAGGTTCTGACg > 1:9704900/6‑101 (MQ=255) atcagcttcGGCAGACCACACTGGTGCAGCTTCAGCTGCGGGCCGACGATAATAACCGAACGGCCGGAGTAGTCAACACGCTTACCCAGCAGGTTCTGACg > 1:8896743/6‑101 (MQ=255) atcagcttcGGCAGACCACACTGGTGCAGCTTCAGCTGCGGGCCGACGATAATAACCGAACGGCCGGAGTAGTCAACACGCTTACCCAGCAGGTTCTGACg > 1:11235558/6‑101 (MQ=255) atcagcttcGGCAGACCACACTGGTGCAGCTTCAGCTGCGGGCCGACGATAATAACCGAACGGCCGGAGTAGTCAACACGCTTACCCAGCAGGTTCTGACg < 1:7694836/96‑1 (MQ=255) aTTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACg < 1:6803118/101‑1 (MQ=255) aTTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACg < 1:10948031/101‑1 (MQ=255) aTTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACg > 1:7511090/1‑101 (MQ=255) ttttCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGTCCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACgg > 1:8075761/1‑101 (MQ=255) tttCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGa < 1:12082878/101‑1 (MQ=255) tttCTTCGACAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGa < 1:4623167/101‑1 (MQ=255) ttcttcGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGaa < 1:5725351/101‑1 (MQ=255) tcttcGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGaaa > 1:12929584/1‑101 (MQ=255) cttcGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAAc < 1:11722785/101‑1 (MQ=255) cttcGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAAc < 1:2390389/101‑1 (MQ=255) cttcGGCAGACCACACGGGTGCAGCTTCAGCTGCGGGCCGACGATAATAACCGAACGGCCGGAGTAGTCAACACGCTTACCCAGCAGGTTCTGACGGAAAc < 1:8179038/101‑1 (MQ=255) ttcGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACg < 1:14018788/101‑1 (MQ=255) gCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGAccc < 1:7129911/101‑1 (MQ=255) cAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCt < 1:9853017/101‑1 (MQ=255) cAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCt < 1:3898693/101‑1 (MQ=255) aGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTg < 1:10121405/101‑1 (MQ=255) aGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTg < 1:134622/101‑1 (MQ=255) aCCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGtt < 1:614273/101‑1 (MQ=255) cGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTa < 1:6188919/101‑1 (MQ=255) aCTGATGCAGACGCAGGTATGGACCTACGGTGATTAAAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCt > 1:7286825/1‑101 (MQ=255) cTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCtt < 1:12630362/101‑1 (MQ=255) cTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCtt < 1:5130787/101‑1 (MQ=255) tGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCttt < 1:4554495/101‑1 (MQ=255) gATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTg < 1:7836962/101‑1 (MQ=255) gATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTg < 1:3526054/101‑1 (MQ=255) gCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATc < 1:3633851/101‑1 (MQ=255) aCGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGt < 1:13351538/101‑1 (MQ=255) aCGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGt < 1:584521/101‑1 (MQ=255) cGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTc < 1:2782453/101‑1 (MQ=255) cGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTc > 1:422422/1‑101 (MQ=255) cAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTCgg < 1:13134221/101‑1 (MQ=255) cAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTCgg > 1:13759726/1‑101 (MQ=255) aGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTCGGc > 1:1112277/1‑101 (MQ=255) aGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTCGGc > 1:5543555/1‑101 (MQ=255) aGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTCGGc > 1:5441793/1‑101 (MQ=255) ggTATGGACCTGCTGTGATTACAGAACGCCCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTTATCATGTCGGcc < 1:8335885/101‑1 (MQ=255) gTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTCGGCCa < 1:9197471/101‑1 (MQ=255) aTGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTCGGCCaaa < 1:2647390/101‑1 (MQ=255) aTGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTCGGCCaaa < 1:8006524/101‑1 (MQ=255) aCCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTCGGCCAAAGAtt > 1:7461305/1‑101 (MQ=255) aCCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTCGGCCAAAGAtt < 1:1977645/101‑1 (MQ=255) aCCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTCGGCCAAAGAtt < 1:4355163/101‑1 (MQ=255) ccTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTCGGCCAAAGAttt > 1:11669166/1‑101 (MQ=255) ccTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTCGGCCAAAGAttt < 1:8476100/101‑1 (MQ=255) aCGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTCGGCCAAAGATTTCag < 1:12697947/101‑1 (MQ=255) ggTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTCGGCCAAAGATTTCagag > 1:6522246/1‑101 (MQ=255) gATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTCGGCCAAAGATTTCAGAGGAc > 1:3204089/1‑101 (MQ=255) aTTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTCGGCCAAAGATTTCAGAGGACg > 1:2269370/1‑101 (MQ=255) tACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTCGGCCAAAGATTTCAGAGGACGCt > 1:10850164/1‑101 (MQ=255) aCAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTCGGCCAAAGATTTCAGAGGACGCtt < 1:14234621/101‑1 (MQ=255) cAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTCGGCCAAAGATTTCAGAGGACGCTTg > 1:1744563/1‑101 (MQ=255) aGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTCGGCCAAAGATTTCAGAGGACGCTTGt > 1:8964918/1‑101 (MQ=255) | GTTCCAGCTTGCCGTAGATGAACGGTTTGAACAGCTCCAGTGCCATTTTCTTCGGCAGACCGCACTGATGCAGACGCAGGTATGGACCTACGGTGATTACAGAACGACCGGAGTAGTCAACACGCTTACCGAGCAGGTTCTGACGGAAACGACCCTGTTTACCTTTGATCATGTCGGCCAAAGATTTCAGAGGACGCTTGT > NC_007779/3450173‑3450373 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |