| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,451,708 | C→A | 25.1% | M1243I (ATG→ATT) | rpoB ← | RNA polymerase subunit beta |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,451,708 | 0 | C→A | 25.1% | 230.6 ‑0.1 ‑0.0 | 306 | M1243I (ATG→ATT) | rpoB | RNA polymerase subunit beta |
| Reads supporting (aligned to +/- strand): new base (40/37): ref base (116/113): total (156/150) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.95e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.94e-01 | ||||||||||
Only 100 of 320 total aligned reads displayed.
CCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTGTTCACCAGTGCGACCATCGTACAGGCGGA > NC_007779/3451608‑3451808 | cccACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGc < 1:13070796/101‑1 (MQ=255)cccACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGc < 1:11920433/101‑1 (MQ=255) ccACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCa < 1:13866244/101‑1 (MQ=255) cacTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCt < 1:1389772/101‑1 (MQ=255) acctCCATCTCACCGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGGGAATCtt > 1:1470422/4‑101 (MQ=255) acTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCtt < 1:1800286/101‑1 (MQ=255) acTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCtt < 1:8728605/101‑1 (MQ=255) acTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCtt < 1:8308111/101‑1 (MQ=255) cctCCATCTCACCGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCttc > 1:2279250/3‑100 (MQ=255) cctCCATCTCACCGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCttc > 1:257768/3‑100 (MQ=255) ttCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTgt < 1:4141983/101‑1 (MQ=255) tCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTgtc < 1:11065400/101‑1 (MQ=255) tctcCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGtcgtcg > 1:2948123/1‑101 (MQ=255) tctcACCGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCtcgtcg < 1:12293989/101‑1 (MQ=255) tctcACCGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCtcgtcg > 1:2461196/1‑101 (MQ=255) cccccccAAACCGTTGACCCCCTATCTGTGCCTTACCACCCAGCGGCTGCTGAGTACCCAGGCTGTAAAAACCGGTGGAACGCGCGTGCATCTTGtcgtcg < 1:9391561/98‑1 (MQ=255) ctcCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGa > 1:10889290/1‑101 (MQ=255) ctcCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGa > 1:404467/1‑101 (MQ=255) ctcACCGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGa > 1:3184077/1‑101 (MQ=255) cccGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCa < 1:11170954/101‑1 (MQ=255) cccGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCa > 1:8894460/1‑101 (MQ=255) cccGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCa > 1:5829370/1‑101 (MQ=255) accGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCa < 1:331541/100‑1 (MQ=255) ccGAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAg < 1:5235957/101‑1 (MQ=255) ccGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAg > 1:7878402/1‑101 (MQ=255) ccGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCAACCAg < 1:6719762/101‑1 (MQ=255) gAAGCGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAggt < 1:8403400/101‑1 (MQ=255) agcGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAggcgg > 1:8567322/3‑101 (MQ=255) aaCGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAggtgg > 1:9515228/1‑101 (MQ=255) gcGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGAGGAACGAGCGTGAATCTTCTCGTCGACCAggtggt < 1:9201128/100‑1 (MQ=255) cGCTGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAggtggtg < 1:1239049/101‑2 (MQ=255) cTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCa > 1:11494502/1‑101 (MQ=255) tGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAg > 1:6279678/1‑101 (MQ=255) tGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAg > 1:469732/1‑101 (MQ=255) tGACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAg > 1:9167942/1‑101 (MQ=255) gACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAgc < 1:7309071/101‑2 (MQ=255) gACCACCGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAgc > 1:8042997/1‑100 (MQ=255) accaccGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAgct > 1:12459631/1‑99 (MQ=255) accaccGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAgct < 1:2351096/101‑3 (MQ=255) ccaccGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGttt < 1:6491779/101‑1 (MQ=255) ccaccGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGttt < 1:2073198/101‑1 (MQ=255) caccGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTc > 1:12576413/1‑101 (MQ=255) caccGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTc < 1:7403268/101‑1 (MQ=255) accGAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCa < 1:10066557/101‑1 (MQ=255) gAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGca < 1:3566332/101‑1 (MQ=255) gAACTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGca < 1:5994748/101‑1 (MQ=255) aaCTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGcat < 1:2760824/101‑1 (MQ=255) aaCTGAGCCTTACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGcat < 1:399451/101‑1 (MQ=255) tgtgCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGcatgta < 1:3826718/101‑1 (MQ=255) tgCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGcatgtaca < 1:5412407/101‑1 (MQ=255) tgCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGcatgtaca > 1:13128809/1‑101 (MQ=255) ccTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGcatgtacatg < 1:532839/101‑1 (MQ=255) cTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGcatgtacatgt > 1:6207111/1‑101 (MQ=255) ttACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGcatgtacatgta > 1:13318804/1‑101 (MQ=255) ttACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGcatgtacatgta > 1:13356586/1‑101 (MQ=255) ttACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGcatgtacatgta > 1:1285288/1‑101 (MQ=255) ttACCACCCAACGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGcatgtacatgta > 1:11147527/1‑101 (MQ=255) taacaccCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTaa > 1:13405817/4‑101 (MQ=255) tACCACCCAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGcatgtacatgtag < 1:6354472/101‑2 (MQ=255) caccCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCa < 1:13568887/101‑1 (MQ=255) caccCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCa > 1:1576508/1‑101 (MQ=255) cccAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGCATGTACATGTAGCCCAc > 1:6089372/1‑101 (MQ=255) ccAGCGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGCATGTACATGTAGCCCAcc < 1:13184071/101‑2 (MQ=255) ccAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACg < 1:7223894/101‑1 (MQ=255) gCGGCTGCTGAGTAACCAGGCTGTAAGAGCCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTGCAGCATGTACATGTAACCAACgggt < 1:1610817/101‑3 (MQ=255) cGGCTGCTGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGCATGTACATGTAGCCCAccgaaa < 1:1774627/101‑6 (MQ=255) gctggtGAGTACCCAGGCTGTAAGAACCGGTGGAACGCGCCTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAGCGGTTAcc < 1:12505066/101‑1 (MQ=255) gctgctGGGTAATCATGGAGTACGGACCGGTGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGCATGTACATGTAGCCCAccgaaacc < 1:6999309/101‑8 (MQ=255) gctgctGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTAcc < 1:11998878/101‑1 (MQ=255) tgctgAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGTTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCgg < 1:2872524/101‑1 (MQ=255) tgAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACg < 1:2200984/101‑1 (MQ=255) tAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCg > 1:3896560/1‑101 (MQ=255) tAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCg > 1:7099078/1‑101 (MQ=255) tAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCg > 1:1277053/1‑101 (MQ=255) aaCCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGa > 1:13983432/1‑101 (MQ=255) ccAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAAc > 1:4798672/1‑101 (MQ=255) cAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGTTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACt > 1:8218919/1‑101 (MQ=255) gCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCCACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGTACGCTCGAACTGtt < 1:2997053/101‑1 (MQ=255) tAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGTTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTGTTCAcc < 1:2701346/101‑1 (MQ=255) aaGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTGTTCACCa > 1:11326282/1‑101 (MQ=255) aaGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTGTTCACCa < 1:11723653/101‑1 (MQ=255) aaGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTGTTCACCa < 1:7852776/101‑1 (MQ=255) aGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTGTTCACCAg < 1:10207520/101‑1 (MQ=255) aGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTGTTCACCAg < 1:10439162/101‑1 (MQ=255) gAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTGTTCACCAGt > 1:9636631/1‑101 (MQ=255) aaCCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTGTTCACCAGTg < 1:68913/101‑1 (MQ=255) aCCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTGTTCACCAGTGc < 1:11108021/101‑1 (MQ=255) ccGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTGTTCACCAGTGCg > 1:5559358/1‑101 (MQ=255) cGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTGTTCACCAGTGCGa < 1:10789324/101‑1 (MQ=255) cGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTGTTCACCAGTGCGa < 1:4529096/101‑1 (MQ=255) tGGAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGCATGTACATGTAGCCCACCGAAACCGGGAACGGGAACTTTTCGCCAGAGCGGccg > 1:3148904/1‑100 (MQ=255) gAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGCATGTACATGTAGCCCACCGAAACCGGGAACGGGAACTTTTCGCCAGAGCGGCCGTc > 1:6416749/1‑101 (MQ=255) gAACGAGCGTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGCATGTACATGTAGCCCACCGAAACCGGGAACGGGAACTTTTCGCCAGAGCGGCCGTc < 1:13696643/101‑1 (MQ=255) aCGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTGTTCACCAGTGCGACCATCGt > 1:2147388/1‑101 (MQ=255) cgcgcgTGCATCTTGTCGTCGACCAGGTGGTTTAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTGTTCACCAGTGCGACGATCGTa > 1:14138569/1‑101 (MQ=255) cgcgcgTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTGTTCACCAGTGCGACCATCGTa < 1:4462408/101‑1 (MQ=255) agcgTGAATCTTCTCGTCGACCAGGTGGTGCAGCTTCAGCATGTACATGTAGCCCACCGAAACCGGGAACGGGAACTTTTCGCCAGAGCGGCCGTCGAACa < 1:8024264/100‑1 (MQ=255) gcgTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTGTTCACCAGTGCGACCATCGTACAg < 1:11653974/101‑1 (MQ=255) cgTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTGTTCACCAGTGCGACCATCGTACAgg < 1:12206076/101‑1 (MQ=255) cATCTTGTCGTCGACCAGGTGGTTTAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTGTTCACCAGTGCGACCATCGTACAGGCGGa > 1:7632107/1‑101 (MQ=255) | CCCACACTTCCATCTCCCCGAAACGCTGACCACCGAACTGTGCCTTACCACCCAGCGGCTGCTGAGTAACCAGGCTGTAAGAACCGGTGGAACGCGCGTGCATCTTGTCGTCGACCAGGTGGTTCAGTTTCAGCATGTACATGTAACCAACGGTTACCGGACGCTCGAACTGTTCACCAGTGCGACCATCGTACAGGCGGA > NC_007779/3451608‑3451808 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |