| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,453,856 | T→C | 6.2% | K527K (AAA→AAG) | rpoB ← | RNA polymerase subunit beta |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,453,856 | 0 | T→C | 6.2% | 30.4 ‑0.2 ‑0.6 | 224 | K527K (AAA→AAG) | rpoB | RNA polymerase subunit beta |
| Reads supporting (aligned to +/- strand): new base (8/6): ref base (109/101): total (117/107) | ||||||||||
| Fisher's exact test strand distribution p-value = 7.87e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.26e-01 | ||||||||||
Only 100 of 244 total aligned reads displayed.
TTGGACATACGCGACCGTAGTGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCTTGGCGT > NC_007779/3453756‑3453956 | tGGACATACGCGACCGTAGTGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACTACGtt > 1:8473056/1‑101 (MQ=255) tGGACATACGCGACCGTAGTGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGtt < 1:10073692/101‑1 (MQ=255) gACATACGCGACCGTAGTGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTtg > 1:11460272/1‑101 (MQ=255) aCATACGCGACCGTAGTGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTtgt > 1:21173/1‑101 (MQ=255) cATACGCGACCGTAGTGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTtgtg > 1:7659579/1‑101 (MQ=255) aTACGCGACCGTAGTGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGc < 1:6521008/101‑1 (MQ=255) aCGCGACCGTAGTGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGt > 1:9318223/1‑101 (MQ=255) cgcgACCGTAGTGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTa > 1:2305175/1‑101 (MQ=255) gACCGTAGTGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAAtc > 1:11107167/1‑101 (MQ=255) ccGTAGTGAGTCGTGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAAtctc < 1:7077223/101‑1 (MQ=255) ccGTAGTGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAAtctc < 1:12635279/101‑1 (MQ=255) tAGTGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGa < 1:7139702/101‑1 (MQ=255) aGTGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑c < 1:5285638/101‑1 (MQ=255) tGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGG‑CAg > 1:8961301/1‑101 (MQ=255) tGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAg > 1:9271213/1‑101 (MQ=255) tGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAg > 1:2587533/1‑101 (MQ=255) gAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGc < 1:8156940/101‑1 (MQ=255) aGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCg < 1:855621/101‑1 (MQ=255) aGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCg > 1:5866850/1‑101 (MQ=255) cGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGgt < 1:4362118/101‑1 (MQ=255) gggTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGgtt < 1:1754734/101‑1 (MQ=255) gggTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGgtt > 1:14222060/1‑101 (MQ=255) gggTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGgtt < 1:6785380/101‑1 (MQ=255) ggTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGgttg < 1:450843/101‑1 (MQ=255) gtgtACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGgttgt > 1:6454107/1‑101 (MQ=255) tgtACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGgttgtt < 1:12148715/101‑1 (MQ=255) gtACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTc > 1:298436/1‑101 (MQ=255) cGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTgg > 1:9464483/1‑101 (MQ=255) cGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTgg < 1:12954215/101‑1 (MQ=255) tctcGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCGGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTc > 1:14250174/1‑101 (MQ=255) tcGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCa > 1:14071025/1‑101 (MQ=255) cGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCAt > 1:10265681/1‑101 (MQ=255) gAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATa > 1:229157/1‑101 (MQ=255) gAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATa > 1:11343704/1‑101 (MQ=255) gAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGACCGAGTGCGGAGATACGACGGTTTGGCGTAATCTCAGA‑CAGCGGGTTGATCTGGTCTATa > 1:3486287/1‑101 (MQ=255) aaCTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATaa < 1:4437020/101‑1 (MQ=255) aaCTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATaa > 1:498057/1‑101 (MQ=255) ttCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACt < 1:1637676/101‑1 (MQ=255) tCGAAGCCTGCACGTTCACGGTTCAGACCGCCTGGGCCGAGTGCGGAGATATGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAGCTg < 1:4762283/101‑1 (MQ=255) tCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTACTCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTg > 1:7591550/1‑101 (MQ=255) tCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTg > 1:3140330/1‑101 (MQ=255) agaccagCACGGTCACGGGTCAGACCACCCGGACCCAGTGCGGACAGACGACGCTTGTGGGTCAGACCCGA‑CAGCGAGTTGTTCTGGTCCATGAACTggga < 1:1062351/95‑1 (MQ=255) aaGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTgaga > 1:10100013/1‑101 (MQ=255) gCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACa < 1:11659328/101‑1 (MQ=255) ccTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAg < 1:14295783/101‑1 (MQ=255) ccTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAg < 1:13558517/101‑1 (MQ=255) gCACGGTCACGGGTCAGACCACCCGGACCCAGTGCGGACAGACGACGCTTGTGGGTCAGACCCGA‑CAGCGAGTTGTTCTGGTCCATGAACTGGGACAgctg < 1:14111075/101‑1 (MQ=255) cACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAgctgg < 1:7778035/101‑1 (MQ=255) cACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAgctgg > 1:13853834/1‑101 (MQ=255) aCGGTCACGGGTCAGACCACCCGGACCCAGTGCGGACAGACGACGCTTGTGGGTCAGACCCGA‑CAGCGAGTTGTTCTGGTCCATGAACTGGGACAgctggg > 1:8805930/1‑100 (MQ=255) aCGGTCACGGGTCAGACCACCCGGACCCAGTGCGGACAGACGACGCTTGTGGGTCAGACCCGA‑CAGCGAGTTGTTCTGGTCCATGAACTGGGACAgctggg > 1:2210846/1‑100 (MQ=255) aCGGTCACGGGTCAGACCACCCGGACCCAGTGCGGACAGACGACGCTTGTGGGTCAGACCCGA‑CAGCGAGTTGTTCTGGTCCATGAACTGGGACAgctggg > 1:12886038/1‑100 (MQ=255) cGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAgctggct > 1:1002107/1‑101 (MQ=255) ttCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGctggctgg < 1:10735336/101‑1 (MQ=255) cGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAAcc < 1:5237437/101‑1 (MQ=255) cGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAAcc < 1:5098215/101‑1 (MQ=255) cGGGTCAGACCACCCGGACCCAGTGCGGACAGACGACGCTTGTGGGTCAGACCCGA‑CAGCGAGTTGTTCTGGTCCATGAACTGGGACAgctgggaagtacc < 1:11784491/101‑9 (MQ=255) gggTCAGACCG‑CTTGGCCGGGGGGGGGGGTAAGACGGTTTGGGGGAATTCCAGACCGGCGGGTGGTT‑TGGGCCATAAACTGAGACAGCTGGCTGGGACCga > 1:13432042/1‑101 (MQ=255) ggTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCga > 1:2721300/1‑101 (MQ=255) cAGACCACCCGGACCCAGTGCGGACAGACGACGCTTGTGGGTCAGACCCGA‑CAGCGAGTTGTTCTGGTCCATGAACTGGGACAGCTGGGAAGTACCgaaga > 1:3909959/1‑101 (MQ=255) aGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCgaagaa < 1:6216552/101‑1 (MQ=255) aCCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAAct > 1:12557203/1‑101 (MQ=255) ccGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAActc > 1:1944703/1‑101 (MQ=255) ccGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAActc > 1:5515234/1‑101 (MQ=255) cGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAActct > 1:5074669/1‑101 (MQ=255) gCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCtt > 1:6930239/1‑101 (MQ=255) tGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCa > 1:1910504/1‑101 (MQ=255) tGGGCCGAGTGCAGAGAAACGACGGTTGTGGGTAATCTCAGA‑CAGCGTGTTGTTCTGGTCCATAAACTGAGACAGCTCGCTGGAACCGAAGAACTGTTTCa < 1:13304874/101‑1 (MQ=255) gCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCActg > 1:5543274/1‑101 (MQ=255) gCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCActg < 1:203972/101‑1 (MQ=255) gCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCActg > 1:5949269/1‑101 (MQ=255) cGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCActgct > 1:9434649/1‑101 (MQ=255) cGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCActgct < 1:9556340/101‑1 (MQ=255) gAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCActgctg < 1:13930589/101‑1 (MQ=255) aGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACtgctgc < 1:10978834/101‑1 (MQ=255) aGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACtgctgc > 1:2852056/1‑101 (MQ=255) tGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCgg > 1:6128307/1‑101 (MQ=255) gCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGa > 1:6846158/1‑101 (MQ=255) cGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGaa < 1:13088350/101‑1 (MQ=255) cGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGaa > 1:12279060/1‑101 (MQ=255) cGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGaa > 1:3583882/1‑101 (MQ=255) cGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGaa > 1:10375707/1‑101 (MQ=255) gagaTACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAAt > 1:8244483/1‑101 (MQ=255) agaTACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATc > 1:973454/1‑101 (MQ=255) agaTACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATc < 1:13736337/101‑1 (MQ=255) agaTACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAAAACTCTTTCACTGCTGCGGAAATc > 1:4561722/1‑101 (MQ=255) aTACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCgg > 1:3252562/1‑101 (MQ=255) tACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGc < 1:12057012/101‑1 (MQ=255) tACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGc > 1:10931184/1‑101 (MQ=255) tACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGc > 1:3789935/1‑101 (MQ=255) acgacgTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCt > 1:7793071/1‑101 (MQ=255) acgacgTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCt < 1:8025079/101‑1 (MQ=255) acgacgTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCt < 1:8125339/101‑1 (MQ=255) acgacgTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCt > 1:4366803/1‑101 (MQ=255) cgacgTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCtt < 1:2330699/101‑1 (MQ=255) cgacgTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCtt < 1:3211639/101‑1 (MQ=255) cgTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCTTGGc > 1:7389177/1‑101 (MQ=255) cgTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCTTGGc > 1:5603414/1‑101 (MQ=255) gTTTGTGCGTAATCTCAGA‑CAGCGGGTTTTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGATCTCTTTCGCTGCTGCGGAAATCGGCTTGGCg < 1:3596953/101‑1 (MQ=255) gTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCTTGGCg > 1:9114537/1‑101 (MQ=255) | TTGGACATACGCGACCGTAGTGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCTTGGCGT > NC_007779/3453756‑3453956 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |