| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_007779 | 3,453,868 | C→A | 6.6% | E523D (GAG→GAT) | rpoB ← | RNA polymerase subunit beta |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_007779 | 3,453,868 | 0 | C→A | 6.6% | 29.5 ‑0.5 ‑0.0 | 211 | E523D (GAG→GAT) | rpoB | RNA polymerase subunit beta |
| Reads supporting (aligned to +/- strand): new base (8/6): ref base (95/102): total (103/108) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.87e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.22e-01 | ||||||||||
Only 100 of 237 total aligned reads displayed.
GACCGTAGTGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCTTGGCGTTGATCATATCCT > NC_007779/3453768‑3453968 | gACCGTAGTGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAAtc > 1:11107167/1‑101 (MQ=255) aCCGTAGTGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAAtct > 1:5663847/1‑101 (MQ=255) cGTAGTGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCa > 1:2976939/1‑101 (MQ=255) tAGTGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGa < 1:7139702/101‑1 (MQ=255) aGTGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑c > 1:10284224/1‑101 (MQ=255) aGTGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑c < 1:11425419/101‑1 (MQ=255) tGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAg > 1:2587533/1‑101 (MQ=255) gAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGc < 1:8156940/101‑1 (MQ=255) aGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCg > 1:5866850/1‑101 (MQ=255) gTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCgg < 1:3419904/101‑1 (MQ=255) gTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCgg > 1:12578868/1‑101 (MQ=255) tCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCggg < 1:12682883/101‑1 (MQ=255) cGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGgt > 1:526675/1‑101 (MQ=255) gggTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGgtt < 1:11339588/101‑1 (MQ=255) gggTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGgtt > 1:14222060/1‑101 (MQ=255) tgtACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGgttgtt > 1:1214896/1‑101 (MQ=255) gtACGTCTCGAACTTCGAAGACTGCACGTTCACGGGTCAGACCGCCTGGGGCGAGTGCGGCGATACGACGTTTGTGCGTAATCTCATT‑CAGCGGGTTGTTc > 1:1456599/1‑101 (MQ=255) tACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCt > 1:7349994/1‑101 (MQ=255) cGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTgg > 1:9464483/1‑101 (MQ=255) gTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGt < 1:9234419/101‑1 (MQ=255) tctcGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCGGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTc > 1:14250174/1‑101 (MQ=255) tcGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCa > 1:13953923/1‑101 (MQ=255) cGAACTTCGAAGCCTGCCCGTTCCCGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCAt < 1:1642626/101‑1 (MQ=255) cGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCAt < 1:1848717/101‑1 (MQ=255) gAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATa > 1:6987485/1‑101 (MQ=255) aaCTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATaa > 1:498057/1‑101 (MQ=255) aaCTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATaa > 1:1088474/1‑101 (MQ=255) aaCTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATaa < 1:4437020/101‑1 (MQ=255) aCTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATaaa < 1:11570466/101‑1 (MQ=255) aCTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATaaa > 1:10933135/1‑101 (MQ=255) aCTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATaaa > 1:229369/1‑101 (MQ=255) ttCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACt < 1:6544529/101‑1 (MQ=255) ttCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACt > 1:10094631/1‑101 (MQ=255) tCGAAGCCTGCACGTTCACGGTTCAGACCGCCTGGGCCGAGTGCGGAGATATGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAGCTg < 1:4762283/101‑1 (MQ=255) agaccagCACGGTCACGGGTCAGACCACCCGGACCCAGTGCGGACAGACGACGCTTGTGGGTCAGACCCGA‑CAGCGAGTTGTTCTGGTCCATGAACTggga < 1:13632926/95‑1 (MQ=255) agaccagCACGGTCACGGGTCAGACCACCCGGACCCAGTGCGGACAGACGACGCTTGTGGGTCAGACCCGA‑CAGCGAGTTGTTCTGGTCCATGAACTggga < 1:1910930/95‑1 (MQ=255) aaGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTgaga < 1:12953151/101‑1 (MQ=255) ccTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAg < 1:14295783/101‑1 (MQ=255) tGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAgct < 1:10223738/101‑1 (MQ=255) cACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAgctgg > 1:13853834/1‑101 (MQ=255) aCGGTCACGGGTCAGACCACCCGGACCCAGTGCGGACAGACGACGCTTGTGGGTCAGACCCGA‑CAGCGAGTTGTTCTGGTCCATGAACTGGGACAgctggg > 1:8805930/1‑100 (MQ=255) cGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAgctggct > 1:1002107/1‑101 (MQ=255) ttCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGctggctgg > 1:8674779/1‑101 (MQ=255) ttCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGctggctgg < 1:10735336/101‑1 (MQ=255) ttCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGctggctgg < 1:10516264/101‑1 (MQ=255) cGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAAcc < 1:2281752/101‑1 (MQ=255) cGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAAcc < 1:5098215/101‑1 (MQ=255) cGGGTCAGACCACCCGGACCCAGTGCGGACAGACGACGCTTGTGGGTCAGACCCGA‑CAGCGAGTTGTTCTGGTCCATGAACTGGGACAgctgggaagtacc < 1:770367/101‑9 (MQ=255) gggTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCg < 1:2118840/101‑1 (MQ=255) gggTCAGACCG‑CTTGGCCGGGGGGGGGGGTAAGACGGTTTGGGGGAATTCCAGACCGGCGGGTGGTT‑TGGGCCATAAACTGAGACAGCTGGCTGGGACCga > 1:13432042/1‑101 (MQ=255) cAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCgaaga > 1:4554735/1‑101 (MQ=255) cAGACCACCCGGACCCAGTGCGGACAGACGACGCTTGTGGGTCAGACCCGA‑CAGCGAGTTGTTCTGGTCCATGAACTGGGACAGCTGGGAAGTACCgaaga > 1:3909959/1‑101 (MQ=255) aGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCgaagaa < 1:6216552/101‑1 (MQ=255) gACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAAc > 1:7460257/1‑101 (MQ=255) gACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAAc > 1:3207902/1‑101 (MQ=255) aCCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAAct > 1:3216227/1‑101 (MQ=255) aCCACCCGGACCCAGTGCGGACAGACGACGCTTGTGGGTCAGACCCGA‑CAGCGAGTTGTTCTGGTCCATGAACTGGGACAGCTGGGAAGTACCGAAGAAct > 1:14143278/1‑101 (MQ=255) ccGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAActc > 1:5515234/1‑101 (MQ=255) cGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAActct > 1:6099242/1‑101 (MQ=255) cGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAActct > 1:5074669/1‑101 (MQ=255) gCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCtt < 1:4371693/101‑1 (MQ=255) tGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCa > 1:9285971/1‑101 (MQ=255) tGGGCCGAGTGCAGAGAAACGACGGTTGTGGGTAATCTCAGA‑CAGCGTGTTGTTCTGGTCCATAAACTGAGACAGCTCGCTGGAACCGAAGAACTGTTTCa < 1:13304874/101‑1 (MQ=255) ggCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCAct < 1:6436970/101‑1 (MQ=255) ggCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCAct < 1:9575123/101‑1 (MQ=255) ggCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCAct < 1:4365068/101‑1 (MQ=255) ggCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCAct > 1:4273731/1‑101 (MQ=255) gCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCActg < 1:5358374/101‑1 (MQ=255) gCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCActg < 1:203972/101‑1 (MQ=255) cGAGTGCGGGGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTTActgct < 1:3039357/101‑1 (MQ=255) cGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCActgct > 1:9434649/1‑101 (MQ=255) caGTGCGGAGATATGCCGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGCCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCGctgctg < 1:2325550/100‑1 (MQ=255) aGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACtgctgc > 1:2852056/1‑101 (MQ=255) gTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCg < 1:5555574/101‑1 (MQ=255) tGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCgg < 1:9088417/101‑1 (MQ=255) gCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGa > 1:6846158/1‑101 (MQ=255) cGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGaa < 1:13088350/101‑1 (MQ=255) cGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGaa > 1:12279060/1‑101 (MQ=255) cGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGaa > 1:10375707/1‑101 (MQ=255) cGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGaa > 1:3583882/1‑101 (MQ=255) gagaTACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAAt > 1:6948755/1‑101 (MQ=255) gagaTACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAAt > 1:8244483/1‑101 (MQ=255) agaTACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATc > 1:973454/1‑101 (MQ=255) agaTACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATc < 1:13736337/101‑1 (MQ=255) agaTACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTACTGGCCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATc < 1:11939247/101‑1 (MQ=255) tACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGc < 1:12057012/101‑1 (MQ=255) acgacgTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCt > 1:7793071/1‑101 (MQ=255) acgacgTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCt < 1:8025079/101‑1 (MQ=255) acgacgTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCt < 1:8125339/101‑1 (MQ=255) gacgTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCTTg < 1:11777475/101‑1 (MQ=255) gacgTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCTTg > 1:7597655/1‑101 (MQ=255) gTTTGTGCGTAATCTCAGA‑CAGCGGGTTTTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGATCTCTTTCGCTGCTGCGGAAATCGGCTTGGCg < 1:3596953/101‑1 (MQ=255) tttGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCTTGGCGt > 1:2609847/1‑101 (MQ=255) tgtgCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCTTGGCGTTg < 1:8511941/101‑1 (MQ=255) gtgCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCTTGGCGTTGa < 1:2083/101‑1 (MQ=255) gtgCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCTTGGCGTTGa > 1:9513318/1‑101 (MQ=255) tgCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCTTGGCGTTGAt < 1:11005858/101‑1 (MQ=255) cGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCTTGGCGTTGATCa < 1:3738148/101‑1 (MQ=255) tAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCTTGGCGTTGATCata < 1:14078436/101‑1 (MQ=255) tctcAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCTTGGCGGTGATCATATcc > 1:5968211/1‑101 (MQ=255) | GACCGTAGTGAGTCGGGTGTACGTCTCGAACTTCGAAGCCTGCACGTTCACGGGTCAGACCGCCTGGGCCGAGTGCGGAGATACGACGTTTGTGCGTAATCTCAGA‑CAGCGGGTTGTTCTGGTCCATAAACTGAGACAGCTGGCTGGAACCGAAGAACTCTTTCACTGCTGCGGAAATCGGCTTGGCGTTGATCATATCCT > NC_007779/3453768‑3453968 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |